RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 NDUFA6P56556 154 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 PRR5P85299 388 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 HTR4Q13639 388 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 TSTD2Q5T7W7 516 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 KCTD9Q7L273 389 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 TPRA1Q86W33 373 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 C12orf29Q8N999 325 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 ZNF527Q8NB42 609 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 OR10H5Q8NGA6 315 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 GGHQ92820 318 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 TANKQ92844 425 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 RTP4Q96DX8 246 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 MAP4K5Q9Y4K4 846 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.82□□□□□ -1.64
SKP1-202ENST00000353411 HYKKA2RU49 373 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 M0R2N6 131 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 CDC123O75794 336 aaPredicted RBP4.82□□□□□ -1.64
SKP1-202ENST00000353411 GCGRP47871 477 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 MAT1AQ00266 395 aaKnown RBP4.82□□□□□ -1.64
SKP1-202ENST00000353411 ZNF177Q13360 481 aaPredicted RBP4.82□□□□□ -1.64
SKP1-202ENST00000353411 TECRLQ5HYJ1 363 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 SFRP4Q6FHJ7 346 aaPredicted RBP4.82□□□□□ -1.64
SKP1-202ENST00000353411 APOBEC3HQ6NTF7 200 aaKnown RBP4.82□□□□□ -1.64
SKP1-202ENST00000353411 CHADLQ6NUI6 762 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 CERS6Q6ZMG9 384 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 USP50Q70EL3 339 aaPredicted RBP4.82□□□□□ -1.64
SKP1-202ENST00000353411 SLC9B2Q86UD5 537 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 LENG9Q96B70 501 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 ZNF382Q96SR6 550 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 ARPC1BO15143 372 aaKnown RBP4.82□□□□□ -1.64
SKP1-202ENST00000353411 HBP1O60381 514 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 NIPSNAP2O75323 286 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 DIRAS1O95057 198 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 HRGP04196 525 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 CSF2RAP15509 400 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 PSMB1P20618 241 aaKnown RBP4.82□□□□□ -1.64
SKP1-202ENST00000353411 FGF7P21781 194 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 KDELR2P33947 212 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 SPAM1P38567 509 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 SLC11A2P49281 568 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 MAP2K6P52564 334 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 ART1P52961 327 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 DUSP4Q13115 394 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 ESRP1Q6NXG1 681 aaKnown RBP4.82□□□□□ -1.64
SKP1-202ENST00000353411 SLC27A4Q6P1M0 643 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 CEP68Q76N32 757 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 SLC51AQ86UW1 340 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 NAXDQ8IW45 347 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 STPG2Q8N412 459 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 C2CD4AQ8NCU7 369 aaPredicted RBP4.82□□□□□ -1.64
SKP1-202ENST00000353411 PCNPQ8WW12 178 aaKnown RBP4.82□□□□□ -1.64
SKP1-202ENST00000353411 INTS12Q96CB8 462 aaKnown RBP4.82□□□□□ -1.64
SKP1-202ENST00000353411 BTN2A3PQ96KV6 586 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 DERL2Q9GZP9 239 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 ANKRD19PQ9H560 264 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 MINDY3Q9H8M7 445 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 OR2S2Q9NQN1 319 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 SMPD4Q9NXE4 827 aa4.82□□□□□ -1.64
SKP1-202ENST00000353411 PRRT4C9JH25 899 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 SMIM22K7EJ46 135 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 QSOX1O00391 747 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 RPN2P04844 631 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 ALPIP09923 528 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 CCND3P30281 292 aaPredicted RBP4.81□□□□□ -1.64
SKP1-202ENST00000353411 PARP15Q460N3 678 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 SPIN4Q56A73 249 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 PRPF38BQ5VTL8 546 aaKnown RBP4.81□□□□□ -1.64
SKP1-202ENST00000353411 FAM171A1Q5VUB5 890 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 ARHGAP11AQ6P4F7 1023 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 CEACAM19Q7Z692 300 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 PXKQ7Z7A4 578 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 COMTD1Q86VU5 262 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 PLPP5Q8NEB5 264 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 OR2L3Q8NG85 312 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 SMPDL3AQ92484 453 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 ZNF599Q96NL3 588 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 FEVQ99581 238 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 ALOXE3Q9BYJ1 711 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 PORCNQ9H237 461 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 ZNF223Q9UK11 482 aaPredicted RBP4.81□□□□□ -1.64
SKP1-202ENST00000353411 SARDHQ9UL12 918 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 NDRG2Q9UN36 371 aaKnown RBP4.81□□□□□ -1.64
SKP1-202ENST00000353411 A0A0A6YYJ9 748 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 LRIT2A6NDA9 550 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 RNF212BA8MTL3 300 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 CXCL8P10145 99 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 GDI1P31150 447 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 ASPAP45381 313 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 PREPP48147 710 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 TLE2Q04725 743 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 CRYZQ08257 329 aaKnown RBP4.81□□□□□ -1.64
SKP1-202ENST00000353411 MFSD10Q14728 455 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 MAJINQ3KP22 176 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 SAXO2Q658L1 398 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 ETFRF1Q6IPR1 90 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 DPY19L2P1Q6NXN4 242 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 TSSK4Q6SA08 328 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 UNC5DQ6UXZ4 953 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 CCDC190Q86UF4 302 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 ADGRG2Q8IZP9 1017 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms