RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 FCRLBQ6BAA4 426 aa12.96□□□□□ -0.34
SEC13-202ENST00000350697 FAM111BQ6SJ93 734 aa12.96□□□□□ -0.34
SEC13-202ENST00000350697 LINC00696Q6ZRV3 163 aa12.96□□□□□ -0.34
SEC13-202ENST00000350697 ARMC10Q8N2F6 343 aa12.96□□□□□ -0.34
SEC13-202ENST00000350697 NATD1Q8N6N6 113 aa12.96□□□□□ -0.34
SEC13-202ENST00000350697 OR7G1Q8NGA0 311 aa12.96□□□□□ -0.34
SEC13-202ENST00000350697 OR7A2PQ8NGA2 310 aa12.96□□□□□ -0.34
SEC13-202ENST00000350697 OR5L2Q8NGL0 311 aa12.96□□□□□ -0.34
SEC13-202ENST00000350697 OR9A2Q8NGT5 310 aa12.96□□□□□ -0.34
SEC13-202ENST00000350697 ZFP28Q8NHY6 868 aa12.96□□□□□ -0.34
SEC13-202ENST00000350697 STON2Q8WXE9 905 aa12.96□□□□□ -0.34
SEC13-202ENST00000350697 CIDECQ96AQ7 238 aaPredicted RBP12.96□□□□□ -0.34
SEC13-202ENST00000350697 COQ8BQ96D53 544 aa12.96□□□□□ -0.34
SEC13-202ENST00000350697 ERP27Q96DN0 273 aa12.96□□□□□ -0.34
SEC13-202ENST00000350697 ZBED6CLQ96FA7 236 aaPredicted RBP12.96□□□□□ -0.34
SEC13-202ENST00000350697 AMDHD1Q96NU7 426 aa12.96□□□□□ -0.34
SEC13-202ENST00000350697 CCT8L2Q96SF2 557 aa12.96□□□□□ -0.34
SEC13-202ENST00000350697 NPAS2Q99743 824 aa12.96□□□□□ -0.34
SEC13-202ENST00000350697 EBF4Q9BQW3 602 aa12.96□□□□□ -0.34
SEC13-202ENST00000350697 CCDC28BQ9BUN5 200 aa12.96□□□□□ -0.34
SEC13-202ENST00000350697 GLIPR2Q9H4G4 154 aa12.96□□□□□ -0.34
SEC13-202ENST00000350697 CDCP1Q9H5V8 836 aa12.96□□□□□ -0.34
SEC13-202ENST00000350697 ZBTB20Q9HC78 741 aaPredicted RBP12.96□□□□□ -0.34
SEC13-202ENST00000350697 SLAMF7Q9NQ25 335 aa12.96□□□□□ -0.34
SEC13-202ENST00000350697 ACSS1Q9NUB1 689 aaPredicted RBP12.96□□□□□ -0.34
SEC13-202ENST00000350697 FGFR1OP2Q9NVK5 253 aa12.96□□□□□ -0.34
SEC13-202ENST00000350697 STMN3Q9NZ72 180 aa12.96□□□□□ -0.34
SEC13-202ENST00000350697 ABI3Q9P2A4 366 aa12.96□□□□□ -0.34
SEC13-202ENST00000350697 ZNF639Q9UID6 485 aa12.96□□□□□ -0.34
SEC13-202ENST00000350697 BOD1L1Q8NFC6 3051 aa12.95□□□□□ -0.34
SEC13-202ENST00000350697 PRKNO60260 465 aaPredicted RBP12.95□□□□□ -0.34
SEC13-202ENST00000350697 DPM1O60762 260 aa12.95□□□□□ -0.34
SEC13-202ENST00000350697 CLPSP04118 112 aa12.95□□□□□ -0.34
SEC13-202ENST00000350697 TROVE2P10155 538 aaKnown RBP eCLIP12.95□□□□□ -0.34
SEC13-202ENST00000350697 LAMP1P11279 417 aa12.95□□□□□ -0.34
SEC13-202ENST00000350697 SSTR4P31391 388 aa12.95□□□□□ -0.34
SEC13-202ENST00000350697 CLNS1AP54105 237 aaKnown RBP12.95□□□□□ -0.34
SEC13-202ENST00000350697 MLF1P58340 268 aa12.95□□□□□ -0.34
SEC13-202ENST00000350697 MRPS35P82673 323 aaKnown RBP12.95□□□□□ -0.34
SEC13-202ENST00000350697 RPS6KA2Q15349 733 aa12.95□□□□□ -0.34
SEC13-202ENST00000350697 GSTA3Q16772 222 aa12.95□□□□□ -0.34
SEC13-202ENST00000350697 MPEG1Q2M385 716 aa12.95□□□□□ -0.34
SEC13-202ENST00000350697 TMEM198Q66K66 360 aa12.95□□□□□ -0.34
SEC13-202ENST00000350697 SLC29A4Q7RTT9 530 aa12.95□□□□□ -0.34
SEC13-202ENST00000350697 CAMKMTQ7Z624 323 aa12.95□□□□□ -0.34
SEC13-202ENST00000350697 C9orf40Q8IXQ3 194 aa12.95□□□□□ -0.34
SEC13-202ENST00000350697 ZADH2Q8N4Q0 377 aa12.95□□□□□ -0.34
SEC13-202ENST00000350697 ZNF615Q8N8J6 731 aa12.95□□□□□ -0.34
SEC13-202ENST00000350697 ANKS4BQ8N8V4 417 aa12.95□□□□□ -0.34
SEC13-202ENST00000350697 NUBPLQ8TB37 319 aa12.95□□□□□ -0.34
SEC13-202ENST00000350697 THAP3Q8WTV1 239 aaPredicted RBP12.95□□□□□ -0.34
SEC13-202ENST00000350697 SLC39A7Q92504 469 aa12.95□□□□□ -0.34
SEC13-202ENST00000350697 KAT2AQ92830 837 aa12.95□□□□□ -0.34
SEC13-202ENST00000350697 THOC1Q96FV9 657 aaKnown RBP12.95□□□□□ -0.34
SEC13-202ENST00000350697 RNF32Q9H0A6 362 aa12.95□□□□□ -0.34
SEC13-202ENST00000350697 OR10A5Q9H207 317 aa12.95□□□□□ -0.34
SEC13-202ENST00000350697 NPHS2Q9NP85 383 aa12.95□□□□□ -0.34
SEC13-202ENST00000350697 CFL2Q9Y281 166 aa12.95□□□□□ -0.34
SEC13-202ENST00000350697 GPR45Q9Y5Y3 372 aa12.95□□□□□ -0.34
SEC13-202ENST00000350697 COL6A6A6NMZ7 2263 aa12.94□□□□□ -0.34
SEC13-202ENST00000350697 DYTNA2CJ06 578 aa12.94□□□□□ -0.34
SEC13-202ENST00000350697 EBAG9O00559 213 aa12.94□□□□□ -0.34
SEC13-202ENST00000350697 CDK2AP1O14519 115 aa12.94□□□□□ -0.34
SEC13-202ENST00000350697 FCHO1O14526 889 aa12.94□□□□□ -0.34
SEC13-202ENST00000350697 MAN1A2O60476 641 aa12.94□□□□□ -0.34
SEC13-202ENST00000350697 PLOD3O60568 738 aa12.94□□□□□ -0.34
SEC13-202ENST00000350697 BCAS2O75934 225 aaPredicted RBP12.94□□□□□ -0.34
SEC13-202ENST00000350697 SOX18P35713 384 aa12.94□□□□□ -0.34
SEC13-202ENST00000350697 MANFP55145 182 aaKnown RBP12.94□□□□□ -0.34
SEC13-202ENST00000350697 SRSF11Q05519 484 aaKnown RBP12.94□□□□□ -0.34
SEC13-202ENST00000350697 EXOSC7Q15024 291 aaKnown RBP12.94□□□□□ -0.34
SEC13-202ENST00000350697 ZSCAN26Q16670 478 aa12.94□□□□□ -0.34
SEC13-202ENST00000350697 DPY19L1Q2PZI1 675 aa12.94□□□□□ -0.34
SEC13-202ENST00000350697 TRMT12Q53H54 448 aaKnown RBP12.94□□□□□ -0.34
SEC13-202ENST00000350697 ZNF551Q7Z340 670 aaPredicted RBP12.94□□□□□ -0.34
SEC13-202ENST00000350697 BEST3Q8N1M1 668 aa12.94□□□□□ -0.34
SEC13-202ENST00000350697 HAS2Q92819 552 aa12.94□□□□□ -0.34
SEC13-202ENST00000350697 TESCQ96BS2 214 aa12.94□□□□□ -0.34
SEC13-202ENST00000350697 BBC3Q96PG8 261 aaPredicted RBP12.94□□□□□ -0.34
SEC13-202ENST00000350697 ZNF317Q96PQ6 595 aaPredicted RBP12.94□□□□□ -0.34
SEC13-202ENST00000350697 DUSP26Q9BV47 211 aa12.94□□□□□ -0.34
SEC13-202ENST00000350697 BHLHE41Q9C0J9 482 aaPredicted RBP12.94□□□□□ -0.34
SEC13-202ENST00000350697 MYOTQ9UBF9 498 aa12.94□□□□□ -0.34
SEC13-202ENST00000350697 BCAP29Q9UHQ4 241 aa12.94□□□□□ -0.34
SEC13-202ENST00000350697 DCTN4Q9UJW0 460 aa12.94□□□□□ -0.34
SEC13-202ENST00000350697 RALYQ9UKM9 306 aaKnown RBP12.94□□□□□ -0.34
SEC13-202ENST00000350697 A0A087WV62 115 aa12.93□□□□□ -0.34
SEC13-202ENST00000350697 A0A1W2PRB8 838 aa12.93□□□□□ -0.34
SEC13-202ENST00000350697 TMEM200CA6NKL6 621 aa12.93□□□□□ -0.34
SEC13-202ENST00000350697 E9PBE3 544 aa12.93□□□□□ -0.34
SEC13-202ENST00000350697 PLOD2O00469 737 aa12.93□□□□□ -0.34
SEC13-202ENST00000350697 PRAMEF2O60811 474 aa12.93□□□□□ -0.34
SEC13-202ENST00000350697 ITGA10O75578 1167 aa12.93□□□□□ -0.34
SEC13-202ENST00000350697 WDPCPO95876 746 aa12.93□□□□□ -0.34
SEC13-202ENST00000350697 CBX7O95931 251 aa12.93□□□□□ -0.34
SEC13-202ENST00000350697 IFI6P09912 130 aa12.93□□□□□ -0.34
SEC13-202ENST00000350697 SEC24CP53992 1094 aa12.93□□□□□ -0.34
SEC13-202ENST00000350697 UFM1P61960 85 aa12.93□□□□□ -0.34
SEC13-202ENST00000350697 ARG2P78540 354 aa12.93□□□□□ -0.34
SEC13-202ENST00000350697 HSPB3Q12988 150 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms