RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 GPR153Q6NV75 609 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 P2RY8Q86VZ1 359 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 NAT6Q93015 286 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 SAV1Q9H4B6 383 aaPredicted RBP11.55□□□□□ -0.56
SMAD9-201ENST00000350148 DCAF13Q9NV06 445 aaKnown RBP11.55□□□□□ -0.56
SMAD9-201ENST00000350148 SLC30A4O14863 429 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 PPM1BO75688 479 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 DBTP11182 482 aaKnown RBP11.55□□□□□ -0.56
SMAD9-201ENST00000350148 CPOXP36551 454 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 TOMM20Q15388 145 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 TCTN1Q2MV58 587 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 Q6ZSR9 355 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 Q8N9G6 341 aaPredicted RBP11.55□□□□□ -0.56
SMAD9-201ENST00000350148 CDRT4Q8N9R6 151 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 AQP11Q8NBQ7 271 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 RARRES3Q9UL19 164 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 CASP8AP2Q9UKL3 1982 aa11.55□□□□□ -0.56
SMAD9-201ENST00000350148 UBFD1O14562 309 aaKnown RBP11.54□□□□□ -0.56
SMAD9-201ENST00000350148 HIST1H1TP22492 207 aaPredicted RBP11.54□□□□□ -0.56
SMAD9-201ENST00000350148 F8A1P23610 371 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 IL32P24001 234 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 S100A2P29034 98 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 BMP8BP34820 402 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 MASP1P48740 699 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 HK3P52790 923 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 BMP8AQ7Z5Y6 402 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 ACOT4Q8N9L9 421 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 FAM129BQ96TA1 746 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 MCHR1Q99705 422 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 RENP00797 406 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 HEXBP07686 556 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 PBX2P40425 430 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 CASRP41180 1078 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 ARFIP1P53367 373 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 ZNF267Q14586 743 aaPredicted RBP11.54□□□□□ -0.56
SMAD9-201ENST00000350148 CLECL1Q8IZS7 167 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 MYLIPQ8WY64 445 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 PIGKQ92643 395 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 DHRS1Q96LJ7 313 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 IFT27Q9BW83 186 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 GTPBP2Q9BX10 602 aaKnown RBP11.54□□□□□ -0.56
SMAD9-201ENST00000350148 MRPS7Q9Y2R9 242 aaKnown RBP11.54□□□□□ -0.56
SMAD9-201ENST00000350148 OR52A4PA6NMU1 304 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 CXCR1P25024 350 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 GABARAPL2P60520 117 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 RACK1P63244 317 aaKnown RBP11.54□□□□□ -0.56
SMAD9-201ENST00000350148 NR0B2Q15466 257 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 ZNF773Q6PK81 442 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 UBALD2Q8IYN6 164 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 PJA1Q8NG27 643 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 KLHL6Q8WZ60 621 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 TCTN2Q96GX1 697 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 QPCTLQ9NXS2 382 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 TVP23BQ9NYZ1 205 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 GABRR3A8MPY1 467 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 PRAMEF2O60811 474 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 ZNF3P17036 446 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 HOXD12P35452 270 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 DEFA5Q01523 94 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 ASTLQ6HA08 431 aaPredicted RBP11.54□□□□□ -0.56
SMAD9-201ENST00000350148 CYHR1Q6ZMK1 362 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 LAPTM4BQ86VI4 370 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 OR5L2Q8NGL0 311 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 MRGPRX3Q96LB0 322 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 TUBA1CQ9BQE3 449 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 MS4A8Q9BY19 250 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 SLC6A15Q9H2J7 730 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 KCNN2Q9H2S1 579 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 C11orf16Q9NQ32 467 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.54□□□□□ -0.56
SMAD9-201ENST00000350148 ENPP4Q9Y6X5 453 aa11.54□□□□□ -0.56
SMAD9-201ENST00000350148 SAGE2PA6NJ88 616 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 RTCAO00442 366 aaKnown RBP11.53□□□□□ -0.56
SMAD9-201ENST00000350148 SELENOWP63302 87 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 GPNMBQ14956 572 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 PTPRRQ15256 657 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 PIP5KL1Q5T9C9 394 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 RNF111Q6ZNA4 994 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 DMRTB1Q96MA1 342 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 PTCHD1Q96NR3 888 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 TEX101Q9BY14 249 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 TRIP12Q14669 1992 aaPredicted RBP11.53□□□□□ -0.56
SMAD9-201ENST00000350148 WWP2O00308 870 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 C1QAP02745 245 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 HOXC4P09017 264 aaPredicted RBP11.53□□□□□ -0.56
SMAD9-201ENST00000350148 FLYWCH1Q4VC44 716 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 XKR5Q6UX68 686 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 SLCO6A1Q86UG4 719 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 ADAMTS19Q8TE59 1207 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 RAB8BQ92930 207 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 RFT1Q96AA3 541 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 TMIGD2Q96BF3 282 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 IER2Q9BTL4 223 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 YBX2Q9Y2T7 364 aaKnown RBP11.53□□□□□ -0.56
SMAD9-201ENST00000350148 ADAP00813 363 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 PRPH2P23942 346 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 SLC6A6P31641 620 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 SEPHS1P49903 392 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 TPMTP51580 245 aa11.53□□□□□ -0.56
SMAD9-201ENST00000350148 PYCR3Q53H96 274 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms