RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 SLC6A2P23975 617 aa17.73■□□□□ 0.43
CHMP4A-201ENST00000347519 PTPN4P29074 926 aa17.73■□□□□ 0.43
CHMP4A-201ENST00000347519 CCT3P49368 545 aaKnown RBP17.73■□□□□ 0.43
CHMP4A-201ENST00000347519 CASP9P55211 416 aa17.73■□□□□ 0.43
CHMP4A-201ENST00000347519 MTPNP58546 118 aa17.73■□□□□ 0.43
CHMP4A-201ENST00000347519 EEF1A2Q05639 463 aaKnown RBP17.73■□□□□ 0.43
CHMP4A-201ENST00000347519 ZNF267Q14586 743 aaPredicted RBP17.73■□□□□ 0.43
CHMP4A-201ENST00000347519 TBC1D25Q3MII6 688 aa17.73■□□□□ 0.43
CHMP4A-201ENST00000347519 SFT2D3Q587I9 215 aa17.73■□□□□ 0.43
CHMP4A-201ENST00000347519 RABL3Q5HYI8 236 aa17.73■□□□□ 0.43
CHMP4A-201ENST00000347519 NANOGP8Q6NSW7 305 aa17.73■□□□□ 0.43
CHMP4A-201ENST00000347519 GALNT12Q8IXK2 581 aa17.73■□□□□ 0.43
CHMP4A-201ENST00000347519 DEFB107AQ8IZN7 70 aa17.73■□□□□ 0.43
CHMP4A-201ENST00000347519 PNPT1Q8TCS8 783 aaKnown RBP17.73■□□□□ 0.43
CHMP4A-201ENST00000347519 TMEM125Q96AQ2 219 aa17.73■□□□□ 0.43
CHMP4A-201ENST00000347519 ZNF578Q96N58 590 aaPredicted RBP17.73■□□□□ 0.43
CHMP4A-201ENST00000347519 CNTNAP3BQ96NU0 1288 aa17.73■□□□□ 0.43
CHMP4A-201ENST00000347519 CNTNAP3Q9BZ76 1288 aa17.73■□□□□ 0.43
CHMP4A-201ENST00000347519 NANOGQ9H9S0 305 aa17.73■□□□□ 0.43
CHMP4A-201ENST00000347519 NEUROD4Q9HD90 331 aa17.73■□□□□ 0.43
CHMP4A-201ENST00000347519 ADAP2Q9NPF8 381 aa17.73■□□□□ 0.43
CHMP4A-201ENST00000347519 GPATCH2Q9NW75 528 aa17.73■□□□□ 0.43
CHMP4A-201ENST00000347519 CMTM6Q9NX76 183 aa17.73■□□□□ 0.43
CHMP4A-201ENST00000347519 ERVK-19Q9WJR5 959 aa17.73■□□□□ 0.43
CHMP4A-201ENST00000347519 MSRB2Q9Y3D2 182 aa17.73■□□□□ 0.43
CHMP4A-201ENST00000347519 HS3ST3B1Q9Y662 390 aa17.73■□□□□ 0.43
CHMP4A-201ENST00000347519 C21orf140B9A014 251 aa17.72■□□□□ 0.43
CHMP4A-201ENST00000347519 DDAH2O95865 285 aa17.72■□□□□ 0.43
CHMP4A-201ENST00000347519 NPPAP01160 153 aa17.72■□□□□ 0.43
CHMP4A-201ENST00000347519 LIPCP11150 499 aa17.72■□□□□ 0.43
CHMP4A-201ENST00000347519 SSTR4P31391 388 aa17.72■□□□□ 0.43
CHMP4A-201ENST00000347519 GALNSP34059 522 aa17.72■□□□□ 0.43
CHMP4A-201ENST00000347519 PGDP52209 483 aa17.72■□□□□ 0.43
CHMP4A-201ENST00000347519 MVDP53602 400 aa17.72■□□□□ 0.43
CHMP4A-201ENST00000347519 RPS15P62841 145 aaKnown RBP17.72■□□□□ 0.43
CHMP4A-201ENST00000347519 BIKQ13323 160 aa17.72■□□□□ 0.43
CHMP4A-201ENST00000347519 IL10RAQ13651 578 aa17.72■□□□□ 0.43
CHMP4A-201ENST00000347519 ELAVL1Q15717 326 aaKnown RBP17.72■□□□□ 0.43
CHMP4A-201ENST00000347519 SPDYE7PQ495Y7 208 aa17.72■□□□□ 0.43
CHMP4A-201ENST00000347519 TMEM64Q6YI46 380 aa17.72■□□□□ 0.43
CHMP4A-201ENST00000347519 GPR155Q7Z3F1 870 aa17.72■□□□□ 0.43
CHMP4A-201ENST00000347519 CPEB2Q7Z5Q1 589 aaKnown RBP17.72■□□□□ 0.43
CHMP4A-201ENST00000347519 PPP1R32Q7Z5V6 425 aa17.72■□□□□ 0.43
CHMP4A-201ENST00000347519 YTHDF3Q7Z739 585 aaKnown RBP17.72■□□□□ 0.43
CHMP4A-201ENST00000347519 VASH2Q86V25 355 aa17.72■□□□□ 0.43
CHMP4A-201ENST00000347519 PGAM4Q8N0Y7 254 aa17.72■□□□□ 0.43
CHMP4A-201ENST00000347519 KIF2BQ8N4N8 673 aa17.72■□□□□ 0.43
CHMP4A-201ENST00000347519 IL22RA1Q8N6P7 574 aa17.72■□□□□ 0.43
CHMP4A-201ENST00000347519 DNAJB8Q8NHS0 232 aa17.72■□□□□ 0.43
CHMP4A-201ENST00000347519 METTL21AQ8WXB1 218 aa17.72■□□□□ 0.43
CHMP4A-201ENST00000347519 PELOQ9BRX2 385 aaKnown RBP17.72■□□□□ 0.43
CHMP4A-201ENST00000347519 BTBD10Q9BSF8 475 aa17.72■□□□□ 0.43
CHMP4A-201ENST00000347519 C1orf21Q9H246 121 aa17.72■□□□□ 0.43
CHMP4A-201ENST00000347519 SERHL2Q9H4I8 314 aa17.72■□□□□ 0.43
CHMP4A-201ENST00000347519 TPT1P8Q9HAU6 139 aa17.72■□□□□ 0.43
CHMP4A-201ENST00000347519 SEMA3GQ9NS98 782 aa17.72■□□□□ 0.43
CHMP4A-201ENST00000347519 ZCCHC3Q9NUD5 404 aaKnown RBP17.72■□□□□ 0.43
CHMP4A-201ENST00000347519 NTMQ9P121 344 aa17.72■□□□□ 0.43
CHMP4A-201ENST00000347519 PADI2Q9Y2J8 665 aa17.72■□□□□ 0.43
CHMP4A-201ENST00000347519 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.71■□□□□ 0.43
CHMP4A-201ENST00000347519 LOC102723996A0A087X1L8 192 aa17.71■□□□□ 0.43
CHMP4A-201ENST00000347519 CLIC1O00299 241 aa17.71■□□□□ 0.43
CHMP4A-201ENST00000347519 SOCS6O14544 535 aa17.71■□□□□ 0.43
CHMP4A-201ENST00000347519 EMC8O43402 210 aa17.71■□□□□ 0.43
CHMP4A-201ENST00000347519 PLOD3O60568 738 aa17.71■□□□□ 0.43
CHMP4A-201ENST00000347519 CYC1P08574 325 aa17.71■□□□□ 0.43
CHMP4A-201ENST00000347519 CD63P08962 238 aa17.71■□□□□ 0.43
CHMP4A-201ENST00000347519 SLC7A2P52569 658 aa17.71■□□□□ 0.43
CHMP4A-201ENST00000347519 PRKAG1P54619 331 aa17.71■□□□□ 0.43
CHMP4A-201ENST00000347519 COX20Q5RI15 118 aa17.71■□□□□ 0.43
CHMP4A-201ENST00000347519 SAXO2Q658L1 398 aa17.71■□□□□ 0.43
CHMP4A-201ENST00000347519 ASRGL1Q7L266 308 aa17.71■□□□□ 0.43
CHMP4A-201ENST00000347519 C6orf120Q7Z4R8 191 aa17.71■□□□□ 0.43
CHMP4A-201ENST00000347519 SLC15A3Q8IY34 581 aa17.71■□□□□ 0.43
CHMP4A-201ENST00000347519 OR2L13Q8N349 312 aa17.71■□□□□ 0.43
CHMP4A-201ENST00000347519 VWA5B2Q8N398 1253 aa17.71■□□□□ 0.43
CHMP4A-201ENST00000347519 NFAM1Q8NET5 270 aaPredicted RBP17.71■□□□□ 0.43
CHMP4A-201ENST00000347519 NUP43Q8NFH3 380 aa17.71■□□□□ 0.43
CHMP4A-201ENST00000347519 SFXN5Q8TD22 340 aa17.71■□□□□ 0.43
CHMP4A-201ENST00000347519 GIMAP5Q96F15 307 aa17.71■□□□□ 0.43
CHMP4A-201ENST00000347519 C16orf58Q96GQ5 468 aa17.71■□□□□ 0.43
CHMP4A-201ENST00000347519 HOPXQ9BPY8 73 aaPredicted RBP17.71■□□□□ 0.43
CHMP4A-201ENST00000347519 CNPPD1Q9BV87 410 aa17.71■□□□□ 0.43
CHMP4A-201ENST00000347519 GPR87Q9BY21 358 aa17.71■□□□□ 0.43
CHMP4A-201ENST00000347519 C19orf53Q9UNZ5 99 aaPredicted RBP17.71■□□□□ 0.43
CHMP4A-201ENST00000347519 A0A087WV62 115 aa17.7■□□□□ 0.42
CHMP4A-201ENST00000347519 NME4O00746 187 aa17.7■□□□□ 0.42
CHMP4A-201ENST00000347519 GYG2O15488 501 aa17.7■□□□□ 0.42
CHMP4A-201ENST00000347519 TLX3O43711 291 aaPredicted RBP17.7■□□□□ 0.42
CHMP4A-201ENST00000347519 HNRNPCL1O60812 293 aaKnown RBP17.7■□□□□ 0.42
CHMP4A-201ENST00000347519 SEC24DO94855 1032 aaPredicted RBP17.7■□□□□ 0.42
CHMP4A-201ENST00000347519 PSMG1O95456 288 aa17.7■□□□□ 0.42
CHMP4A-201ENST00000347519 LIFP15018 202 aa17.7■□□□□ 0.42
CHMP4A-201ENST00000347519 MMP11P24347 488 aa17.7■□□□□ 0.42
CHMP4A-201ENST00000347519 OTX2P32243 289 aa17.7■□□□□ 0.42
CHMP4A-201ENST00000347519 CHI3L1P36222 383 aaPredicted RBP17.7■□□□□ 0.42
CHMP4A-201ENST00000347519 RPS26P62854 115 aaKnown RBP17.7■□□□□ 0.42
CHMP4A-201ENST00000347519 FUT7Q11130 342 aa17.7■□□□□ 0.42
CHMP4A-201ENST00000347519 CLN3Q13286 438 aa17.7■□□□□ 0.42
CHMP4A-201ENST00000347519 TP53BP2Q13625 1128 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms