RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 ACTR10Q9NZ32 417 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 FBXL21Q9UKT6 434 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 SULT1C2O00338 296 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 TLX3O43711 291 aaPredicted RBP17.25■□□□□ 0.35
SMC4-201ENST00000344722 SULT1C4O75897 302 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 PTPN6P29350 595 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 ADARB1P78563 741 aaKnown RBP17.25■□□□□ 0.35
SMC4-201ENST00000344722 RETREG3Q86VR2 466 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 SLC22A15Q8IZD6 547 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 SLC7A13Q8TCU3 470 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 SORCS1Q8WY21 1168 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 SLC22A18Q96BI1 424 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 ABCG4Q9H172 646 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 TMEM39AQ9NV64 488 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 METTL15A6NJ78 407 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 SOCS5O75159 536 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 METTL2BQ6P1Q9 378 aaKnown RBP17.25■□□□□ 0.35
SMC4-201ENST00000344722 ARL14Q8N4G2 192 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 C3orf58Q8NDZ4 430 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 TMEM106CQ9BVX2 250 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 THSD1Q9NS62 852 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 CENPMQ9NSP4 180 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 CBFBQ13951 182 aa17.24■□□□□ 0.35
SMC4-201ENST00000344722 SMN1Q16637 294 aaKnown RBP17.24■□□□□ 0.35
SMC4-201ENST00000344722 FAM110CQ1W6H9 321 aa17.24■□□□□ 0.35
SMC4-201ENST00000344722 C18orf21Q32NC0 220 aaPredicted RBP17.24■□□□□ 0.35
SMC4-201ENST00000344722 TCEAL6Q6IPX3 200 aa17.24■□□□□ 0.35
SMC4-201ENST00000344722 GSG1LQ6UXU4 331 aa17.24■□□□□ 0.35
SMC4-201ENST00000344722 NAGSQ8N159 534 aa17.24■□□□□ 0.35
SMC4-201ENST00000344722 TMEM185AQ8NFB2 350 aa17.24■□□□□ 0.35
SMC4-201ENST00000344722 DBF4BQ8NFT6 615 aa17.24■□□□□ 0.35
SMC4-201ENST00000344722 MFFQ9GZY8 342 aa17.24■□□□□ 0.35
SMC4-201ENST00000344722 IL36AQ9UHA7 158 aa17.24■□□□□ 0.35
SMC4-201ENST00000344722 ANHXE9PGG2 379 aa17.24■□□□□ 0.35
SMC4-201ENST00000344722 PFKLP17858 780 aa17.24■□□□□ 0.35
SMC4-201ENST00000344722 ATP5A1P25705 553 aaKnown RBP17.24■□□□□ 0.35
SMC4-201ENST00000344722 SSTR2P30874 369 aa17.24■□□□□ 0.35
SMC4-201ENST00000344722 DOC2AQ14183 400 aa17.24■□□□□ 0.35
SMC4-201ENST00000344722 IQCF1Q8N6M8 205 aa17.24■□□□□ 0.35
SMC4-201ENST00000344722 NLGN2Q8NFZ4 835 aa17.24■□□□□ 0.35
SMC4-201ENST00000344722 OR5T2Q8NGG2 359 aa17.24■□□□□ 0.35
SMC4-201ENST00000344722 MYH13Q9UKX3 1938 aa17.24■□□□□ 0.35
SMC4-201ENST00000344722 GXYLT2A0PJZ3 443 aa17.24■□□□□ 0.35
SMC4-201ENST00000344722 TNFRSF1BP20333 461 aa17.24■□□□□ 0.35
SMC4-201ENST00000344722 RRAS2P62070 204 aaPredicted RBP17.24■□□□□ 0.35
SMC4-201ENST00000344722 FAM189BP81408 668 aa17.24■□□□□ 0.35
SMC4-201ENST00000344722 MRPS10P82664 201 aaKnown RBP17.24■□□□□ 0.35
SMC4-201ENST00000344722 PM20D1Q6GTS8 502 aa17.24■□□□□ 0.35
SMC4-201ENST00000344722 CBLL1Q75N03 491 aa17.24■□□□□ 0.35
SMC4-201ENST00000344722 SLC46A3Q7Z3Q1 461 aa17.24■□□□□ 0.35
SMC4-201ENST00000344722 LRRC28Q86X40 367 aaPredicted RBP17.24■□□□□ 0.35
SMC4-201ENST00000344722 PTRH1Q86Y79 214 aaKnown RBP17.24■□□□□ 0.35
SMC4-201ENST00000344722 PCYT2Q99447 389 aa17.24■□□□□ 0.35
SMC4-201ENST00000344722 RAD9AQ99638 391 aa17.24■□□□□ 0.35
SMC4-201ENST00000344722 RBFOX1Q9NWB1 397 aaKnown RBP17.24■□□□□ 0.35
SMC4-201ENST00000344722 HAPLN1P10915 354 aaPredicted RBP17.24■□□□□ 0.35
SMC4-201ENST00000344722 KIAA1324Q6UXG2 1013 aaKnown RBP17.24■□□□□ 0.35
SMC4-201ENST00000344722 DNAJC22Q8N4W6 341 aa17.24■□□□□ 0.35
SMC4-201ENST00000344722 TMEM145Q8NBT3 493 aa17.24■□□□□ 0.35
SMC4-201ENST00000344722 OR8K3Q8NH51 312 aa17.24■□□□□ 0.35
SMC4-201ENST00000344722 NEDD4LQ96PU5 975 aa17.24■□□□□ 0.35
SMC4-201ENST00000344722 HMX1Q9NP08 348 aaPredicted RBP17.24■□□□□ 0.35
SMC4-201ENST00000344722 TREX1Q9NSU2 369 aa17.24■□□□□ 0.35
SMC4-201ENST00000344722 INPPL1O15357 1258 aa17.23■□□□□ 0.35
SMC4-201ENST00000344722 USP2O75604 605 aaPredicted RBP17.23■□□□□ 0.35
SMC4-201ENST00000344722 SLC22A5O76082 557 aa17.23■□□□□ 0.35
SMC4-201ENST00000344722 ADORA3P0DMS8 318 aa17.23■□□□□ 0.35
SMC4-201ENST00000344722 MMP12P39900 470 aa17.23■□□□□ 0.35
SMC4-201ENST00000344722 ADPRMQ3LIE5 342 aa17.23■□□□□ 0.35
SMC4-201ENST00000344722 ZNF783Q6ZMS7 281 aa17.23■□□□□ 0.35
SMC4-201ENST00000344722 SLC25A36Q96CQ1 311 aa17.23■□□□□ 0.35
SMC4-201ENST00000344722 PGAP3Q96FM1 320 aaPredicted RBP17.23■□□□□ 0.35
SMC4-201ENST00000344722 CNN2Q99439 309 aaKnown RBP17.23■□□□□ 0.35
SMC4-201ENST00000344722 UNKLQ9H9P5 680 aaKnown RBP17.23■□□□□ 0.35
SMC4-201ENST00000344722 CPNE6O95741 557 aa17.23■□□□□ 0.35
SMC4-201ENST00000344722 PROS1P07225 676 aa17.23■□□□□ 0.35
SMC4-201ENST00000344722 C8orf89P0DMQ9 161 aa17.23■□□□□ 0.35
SMC4-201ENST00000344722 CERS1P27544 350 aa17.23■□□□□ 0.35
SMC4-201ENST00000344722 SHFQ7M4L6 423 aa17.23■□□□□ 0.35
SMC4-201ENST00000344722 PROKR1Q8TCW9 393 aa17.23■□□□□ 0.35
SMC4-201ENST00000344722 TMEM19Q96HH6 336 aa17.23■□□□□ 0.35
SMC4-201ENST00000344722 CCDC86Q9H6F5 360 aaKnown RBP17.23■□□□□ 0.35
SMC4-201ENST00000344722 MYH11P35749 1972 aa17.23■□□□□ 0.35
SMC4-201ENST00000344722 GMDSO60547 372 aa17.23■□□□□ 0.35
SMC4-201ENST00000344722 SNAPINO95295 136 aa17.23■□□□□ 0.35
SMC4-201ENST00000344722 UGT3A2Q3SY77 523 aa17.23■□□□□ 0.35
SMC4-201ENST00000344722 CDNFQ49AH0 187 aa17.23■□□□□ 0.35
SMC4-201ENST00000344722 FAM205BPQ63HN1 556 aa17.23■□□□□ 0.35
SMC4-201ENST00000344722 DGLUCYQ7Z3D6 616 aa17.23■□□□□ 0.35
SMC4-201ENST00000344722 APIPQ96GX9 242 aa17.23■□□□□ 0.35
SMC4-201ENST00000344722 MRI1Q9BV20 369 aa17.23■□□□□ 0.35
SMC4-201ENST00000344722 RDH14Q9HBH5 336 aa17.23■□□□□ 0.35
SMC4-201ENST00000344722 MED1Q15648 1581 aaPredicted RBP17.23■□□□□ 0.35
SMC4-201ENST00000344722 SLC16A6O15403 523 aa17.23■□□□□ 0.35
SMC4-201ENST00000344722 POP7O75817 140 aaKnown RBP17.23■□□□□ 0.35
SMC4-201ENST00000344722 HSD11B1P28845 292 aa17.23■□□□□ 0.35
SMC4-201ENST00000344722 MAGEA3P43357 314 aa17.23■□□□□ 0.35
SMC4-201ENST00000344722 ARSIQ5FYB1 569 aa17.23■□□□□ 0.35
SMC4-201ENST00000344722 ARHGAP11AQ6P4F7 1023 aa17.23■□□□□ 0.35
SMC4-201ENST00000344722 B3GNT2Q9NY97 397 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms