RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 GPR65Q8IYL9 337 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 DYNC2LI1Q8TCX1 351 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 TMEM159Q96B96 161 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 RASD2Q96D21 266 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 TAAR1Q96RJ0 339 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 RHOFQ9HBH0 211 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 C2orf78A6NCI8 922 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 TERTO14746 1132 aaKnown RBP3.61□□□□□ -1.83
SYNE2-202ENST00000344113 SURF4O15260 269 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 MSX2P35548 267 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-202ENST00000344113 WDR4P57081 412 aaKnown RBP3.61□□□□□ -1.83
SYNE2-202ENST00000344113 NME3Q13232 169 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 ABCA11PQ4W5N1 156 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF362Q5T0B9 420 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-202ENST00000344113 LYPLAL1Q5VWZ2 237 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF705AQ6ZN79 300 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-202ENST00000344113 AHSA2Q719I0 299 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 OR5L2Q8NGL0 311 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 GJA10Q969M2 543 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 PYCR2Q96C36 320 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 MED8Q96G25 268 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 MTCH2Q9Y6C9 303 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 TMEM2Q9UHN6 1383 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 TGIF2-C20orf24A0A0A6YYL0 155 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 RFC2P35250 354 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 C6orf141Q5SZD1 244 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 UBE2UQ5VVX9 321 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 KCTD9Q7L273 389 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 L3MBTL4Q8NA19 623 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 OR2T35Q8NGX2 323 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 CREB3L4Q8TEY5 395 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 SCARB1Q8WTV0 552 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 OMDQ99983 421 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 C11orf84Q9BUA3 381 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-202ENST00000344113 BANF2Q9H503 90 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 PARD6AQ9NPB6 346 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 SIDT1Q9NXL6 827 aaKnown RBP3.61□□□□□ -1.83
SYNE2-202ENST00000344113 PCDHGA2Q9Y5H1 932 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 RNF13O43567 381 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 ONECUT3O60422 494 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-202ENST00000344113 SLC22A3O75751 556 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 MT-ND4P03905 459 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 HKR1P10072 659 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 CDK8P49336 464 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 FXR2P51116 673 aaKnown RBP eCLIP3.61□□□□□ -1.832e-6■■■■■ 27
SYNE2-202ENST00000344113 CRTC2Q53ET0 693 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-202ENST00000344113 SLC26A9Q7LBE3 791 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 FBXO32Q969P5 355 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 SENP5Q96HI0 755 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-202ENST00000344113 UGT2B7P16662 529 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 ADPRHP54922 357 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 CACNB2Q08289 660 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-202ENST00000344113 SIM2Q14190 667 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-202ENST00000344113 FAM102BQ5T8I3 360 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 SDHAF4Q5VUM1 108 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 MAP1SQ66K74 1059 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-202ENST00000344113 ACOT7LQ6ZUV0 252 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 PSTKQ8IV42 348 aaKnown RBP3.61□□□□□ -1.83
SYNE2-202ENST00000344113 SLC39A11Q8N1S5 342 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 SLC35F5Q8WV83 523 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 NRG4Q8WWG1 115 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 FCRL3Q96P31 734 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-202ENST00000344113 LRFN1Q9P244 771 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 PPM1HQ9ULR3 514 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 ARHGAP33O14559 1287 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 NDUFS6O75380 124 aaKnown RBP3.61□□□□□ -1.83
SYNE2-202ENST00000344113 PSMD10O75832 226 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 PNLIPRP1P54315 467 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 IQCCQ4KMZ1 466 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 CDCA3Q99618 268 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-202ENST00000344113 PRRT1Q99946 306 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 SIRT5Q9NXA8 310 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 MYH7BA7E2Y1 1941 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 G3V3Q6 166 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 HIST1H2ABP04908 130 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 ATP5A1P25705 553 aaKnown RBP3.61□□□□□ -1.83
SYNE2-202ENST00000344113 CACNB1Q02641 598 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF266Q14584 549 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 TAZQ16635 292 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 CHADLQ6NUI6 762 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 HIST3H2AQ7L7L0 130 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 BHLHA15Q7RTS1 189 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-202ENST00000344113 PTRH1Q86Y79 214 aaKnown RBP3.61□□□□□ -1.83
SYNE2-202ENST00000344113 OR52H1Q8NGJ2 320 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 HIST1H2ACQ93077 130 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 TOE1Q96GM8 510 aaKnown RBP3.61□□□□□ -1.83
SYNE2-202ENST00000344113 PNMA5Q96PV4 448 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 ASAH2Q9NR71 780 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 E9PCH4 1651 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 TSPAN8P19075 237 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 SERPINA4P29622 427 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 NNMTP40261 264 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 SRPXP78539 464 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 MRPS5P82675 430 aaKnown RBP3.61□□□□□ -1.83
SYNE2-202ENST00000344113 TMEM115Q12893 351 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-202ENST00000344113 C21orf62-AS1Q17RA5 79 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 DMRTB1Q96MA1 342 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 OR5B2Q96R09 309 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 NMRK2Q9NPI5 230 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 C19orf53Q9UNZ5 99 aaPredicted RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms