RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 DHCR7Q9UBM7 475 aaKnown RBP13.82□□□□□ -0.2
CXCL12-201ENST00000343575 PHF11Q9UIL8 331 aa13.82□□□□□ -0.2
CXCL12-201ENST00000343575 KIF26BQ2KJY2 2108 aa13.81□□□□□ -0.2
CXCL12-201ENST00000343575 MYO1GB0I1T2 1018 aa13.81□□□□□ -0.2
CXCL12-201ENST00000343575 PDPK1O15530 556 aa13.81□□□□□ -0.2
CXCL12-201ENST00000343575 B4GALT2O60909 372 aa13.81□□□□□ -0.2
CXCL12-201ENST00000343575 RASAL1O95294 804 aa13.81□□□□□ -0.2
CXCL12-201ENST00000343575 TIAF1O95411 115 aa13.81□□□□□ -0.2
CXCL12-201ENST00000343575 C8orf89P0DMQ9 161 aa13.81□□□□□ -0.2
CXCL12-201ENST00000343575 PSMA4P25789 261 aaKnown RBP13.81□□□□□ -0.2
CXCL12-201ENST00000343575 PTGER1P34995 402 aa13.81□□□□□ -0.2
CXCL12-201ENST00000343575 ITGA1P56199 1179 aa13.81□□□□□ -0.2
CXCL12-201ENST00000343575 SHC2P98077 582 aa13.81□□□□□ -0.2
CXCL12-201ENST00000343575 ATP6AP1Q15904 470 aa13.81□□□□□ -0.2
CXCL12-201ENST00000343575 LINC00299Q6ZSB3 139 aa13.81□□□□□ -0.2
CXCL12-201ENST00000343575 ZNF621Q6ZSS3 439 aa13.81□□□□□ -0.2
CXCL12-201ENST00000343575 MINDY2Q8NBR6 621 aa13.81□□□□□ -0.2
CXCL12-201ENST00000343575 VPS37AQ8NEZ2 397 aa13.81□□□□□ -0.2
CXCL12-201ENST00000343575 ZNF583Q96ND8 569 aa13.81□□□□□ -0.2
CXCL12-201ENST00000343575 AMDHD1Q96NU7 426 aa13.81□□□□□ -0.2
CXCL12-201ENST00000343575 KAT8Q9H7Z6 458 aaKnown RBP13.81□□□□□ -0.2
CXCL12-201ENST00000343575 AGPAT4Q9NRZ5 378 aa13.81□□□□□ -0.2
CXCL12-201ENST00000343575 GPATCH2Q9NW75 528 aa13.81□□□□□ -0.2
CXCL12-201ENST00000343575 OCIAD1Q9NX40 245 aa13.81□□□□□ -0.2
CXCL12-201ENST00000343575 TOR4AQ9NXH8 423 aa13.81□□□□□ -0.2
CXCL12-201ENST00000343575 MS4A12Q9NXJ0 267 aa13.81□□□□□ -0.2
CXCL12-201ENST00000343575 TAS2R9Q9NYW1 312 aa13.81□□□□□ -0.2
CXCL12-201ENST00000343575 DHRS12A0PJE2 317 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 SOCS2O14508 198 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 E2F6O75461 281 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 ERAL1O75616 437 aaKnown RBP13.8□□□□□ -0.2
CXCL12-201ENST00000343575 ABCB1P08183 1280 aaPredicted RBP13.8□□□□□ -0.2
CXCL12-201ENST00000343575 JUNBP17275 347 aaPredicted RBP13.8□□□□□ -0.2
CXCL12-201ENST00000343575 SOX18P35713 384 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 BUD31P41223 144 aaPredicted RBP13.8□□□□□ -0.2
CXCL12-201ENST00000343575 GSK3BP49841 420 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 MVDP53602 400 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 CDH15P55291 814 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 RAB38P57729 211 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 LIPEQ05469 1076 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 TBCELQ5QJ74 424 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 PHF19Q5T6S3 580 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 LCN8Q6JVE9 175 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 TTLL10Q6ZVT0 673 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 PIP4P1Q86T03 277 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 OR4N5Q8IXE1 308 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 BMPERQ8N8U9 685 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 TTC29Q8NA56 475 aaPredicted RBP13.8□□□□□ -0.2
CXCL12-201ENST00000343575 SLC38A9Q8NBW4 561 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 OR4A15Q8NGL6 344 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 PSMA8Q8TAA3 256 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 ZFP90Q8TF47 636 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.8□□□□□ -0.2
CXCL12-201ENST00000343575 RNF31Q96EP0 1072 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 MAGED4Q96JG8 741 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 OR6C1Q96RD1 312 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 CXorf36Q9H7Y0 433 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 APMAPQ9HDC9 416 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 ACSS1Q9NUB1 689 aaPredicted RBP13.8□□□□□ -0.2
CXCL12-201ENST00000343575 HCN3Q9P1Z3 774 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.8□□□□□ -0.2
CXCL12-201ENST00000343575 SERTAD3Q9UJW9 196 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 CLDN16Q9Y5I7 305 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 BOLA2-SMG1P6H3BVE0 249 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 CLIC1O00299 241 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 CLOCKO15516 846 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 TIPRLO75663 272 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 UMPSP11172 480 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 FEN1P39748 380 aaKnown RBP13.8□□□□□ -0.2
CXCL12-201ENST00000343575 CAPGP40121 348 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 EEFSECP57772 596 aaKnown RBP13.8□□□□□ -0.2
CXCL12-201ENST00000343575 LRRC74AQ0VAA2 488 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 MLC1Q15049 377 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 RGS21Q2M5E4 152 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 FAM214AQ32MH5 1076 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 AASDHQ4L235 1098 aaPredicted RBP13.8□□□□□ -0.2
CXCL12-201ENST00000343575 CBR4Q8N4T8 237 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 DHRSXQ8N5I4 330 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 OR5P2Q8WZ92 322 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 MMABQ96EY8 250 aaPredicted RBP13.8□□□□□ -0.2
CXCL12-201ENST00000343575 TMEM121BQ9BXQ6 578 aaPredicted RBP13.8□□□□□ -0.2
CXCL12-201ENST00000343575 PIF1Q9H611 641 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 EPS8L2Q9H6S3 715 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 TPT1P8Q9HAU6 139 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 PRDM9Q9NQV7 894 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 ACTR3BQ9P1U1 418 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 MAU2Q9Y6X3 613 aa13.8□□□□□ -0.2
CXCL12-201ENST00000343575 RIF1Q5UIP0 2472 aaKnown RBP13.79□□□□□ -0.2
CXCL12-201ENST00000343575 RNF103-CHMP3A0A140T963 221 aa13.79□□□□□ -0.2
CXCL12-201ENST00000343575 H0YAE9 185 aa13.79□□□□□ -0.2
CXCL12-201ENST00000343575 H0YIG0 161 aa13.79□□□□□ -0.2
CXCL12-201ENST00000343575 TGFBR3LH3BV60 316 aa13.79□□□□□ -0.2
CXCL12-201ENST00000343575 KPNA4O00629 521 aaPredicted RBP13.79□□□□□ -0.2
CXCL12-201ENST00000343575 FGF17O60258 216 aa13.79□□□□□ -0.2
CXCL12-201ENST00000343575 LDB3O75112 727 aa13.79□□□□□ -0.2
CXCL12-201ENST00000343575 ATE1O95260 518 aa13.79□□□□□ -0.2
CXCL12-201ENST00000343575 GPX2P18283 190 aa13.79□□□□□ -0.2
CXCL12-201ENST00000343575 OR1D4P47884 311 aa13.79□□□□□ -0.2
CXCL12-201ENST00000343575 HLCSP50747 726 aa13.79□□□□□ -0.2
CXCL12-201ENST00000343575 MANFP55145 182 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms