RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 LRRC32Q14392 662 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 ZNF57Q68EA5 555 aaPredicted RBP9.15□□□□□ -0.94
HOXA1-201ENST00000343060 USP45Q70EL2 814 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 TSPAN33Q86UF1 283 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 CELF5Q8N6W0 485 aaKnown RBP9.15□□□□□ -0.94
HOXA1-201ENST00000343060 GPR156Q8NFN8 814 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 OVCA2Q8WZ82 227 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 PPCDCQ96CD2 204 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 TMEM121BQ9BXQ6 578 aaPredicted RBP9.15□□□□□ -0.94
HOXA1-201ENST00000343060 TM6SF2Q9BZW4 377 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 CYSLTR2Q9NS75 346 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 ASB6Q9NWX5 421 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 DNMT3AQ9Y6K1 912 aaPredicted RBP9.15□□□□□ -0.94
HOXA1-201ENST00000343060 A0A1B0GVI7 797 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 A0A1W2PRQ8 180 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 MYADML2A6NDP7 307 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 NPIPB15A6NHN6 443 aaPredicted RBP9.15□□□□□ -0.94
HOXA1-201ENST00000343060 ARHGEF33A8MVX0 844 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 GABRPO00591 440 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 KPNA5O15131 536 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 COCHO43405 550 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 PSIP1O75475 530 aaKnown RBP9.15□□□□□ -0.94
HOXA1-201ENST00000343060 MPC2O95563 127 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 PAHP00439 452 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 HLA-DPB1P04440 258 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 CHRM5P08912 532 aaPredicted RBP9.15□□□□□ -0.94
HOXA1-201ENST00000343060 UQCRC2P22695 453 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 EPHA4P54764 986 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 RPS13P62277 151 aaKnown RBP9.15□□□□□ -0.94
HOXA1-201ENST00000343060 POU4F3Q15319 338 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 ZNF284Q2VY69 593 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 BCL2L15Q5TBC7 163 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 TYW3Q6IPR3 259 aaKnown RBP9.15□□□□□ -0.94
HOXA1-201ENST00000343060 CRTC1Q6UUV9 634 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 SLC36A4Q6YBV0 504 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 COMMD6Q7Z4G1 85 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 MARCH9Q86YJ5 346 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 DNAJC5GQ8N7S2 189 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 OR56A3Q8NH54 315 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 OR5AK3PQ8NH89 298 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 SLC7A13Q8TCU3 470 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 SKA2Q8WVK7 121 aaPredicted RBP9.15□□□□□ -0.94
HOXA1-201ENST00000343060 GATAD2BQ8WXI9 593 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 BRI3BPQ8WY22 251 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 RFT1Q96AA3 541 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 PHF21AQ96BD5 680 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 RNFT2Q96EX2 444 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 MSANTD3Q96H12 275 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 ZSWIM3Q96MP5 696 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 PPA2Q9H2U2 334 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 GPBP1L1Q9HC44 474 aaPredicted RBP9.15□□□□□ -0.94
HOXA1-201ENST00000343060 EVA1BQ9NVM1 165 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 LYARQ9NX58 379 aaKnown RBP9.15□□□□□ -0.94
HOXA1-201ENST00000343060 UBQLN2Q9UHD9 624 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 FBXW2Q9UKT8 454 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 ICKQ9UPZ9 632 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 ANAPC1Q9H1A4 1944 aa9.15□□□□□ -0.95
HOXA1-201ENST00000343060 KDM4EB2RXH2 506 aaPredicted RBP9.14□□□□□ -0.95
HOXA1-201ENST00000343060 K7ERQ8 282 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 FOXE1O00358 373 aaPredicted RBP9.14□□□□□ -0.95
HOXA1-201ENST00000343060 NFATC1O95644 943 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 LALBAP00709 142 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 OR12D1P0DN82 309 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 TFPIP10646 304 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 ELK1P19419 428 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 DDCP20711 480 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 KCNJ5P48544 419 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 GIPRP48546 466 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 CYP4F8P98187 520 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 TAP2Q03519 686 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 ZNF155Q12901 538 aaPredicted RBP9.14□□□□□ -0.95
HOXA1-201ENST00000343060 GINS1Q14691 196 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 PRSS53Q2L4Q9 553 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 CLLU1OSQ5K130 101 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 ENTPD8Q5MY95 495 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 VASNQ6EMK4 673 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 ACSM5Q6NUN0 579 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 GLB1LQ6UWU2 654 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 OTOP2Q7RTS6 562 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 LINC00471Q8N535 108 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 POGLUT1Q8NBL1 392 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 OR4D11Q8NGI4 311 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 OR5M3Q8NGP4 307 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 OR6K2Q8NGY2 324 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 NEIL3Q8TAT5 605 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 C16orf78Q8WTQ4 265 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 VOPP1Q96AW1 172 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 RBP7Q96R05 134 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 RERGLQ9H628 205 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 STOX2Q9P2F5 926 aaPredicted RBP9.14□□□□□ -0.95
HOXA1-201ENST00000343060 PPIL1Q9Y3C6 166 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 NUBP2Q9Y5Y2 271 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 NPTNQ9Y639 398 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 DOCK3Q8IZD9 2030 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 DOCK6Q96HP0 2047 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 MEIKINA0A087WXM9 373 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 CCL15-CCL14A0A0B4J2E2 113 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 ZNF840PA6NDX5 716 aa9.14□□□□□ -0.95
HOXA1-201ENST00000343060 KHNYNO15037 678 aaKnown RBP9.14□□□□□ -0.95
HOXA1-201ENST00000343060 LANCL1O43813 399 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms