RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 ELF4Q99607 663 aaPredicted RBP15.27■□□□□ 0.03
HPS1-202ENST00000338546 PDP1Q9P0J1 537 aaPredicted RBP15.27■□□□□ 0.03
HPS1-202ENST00000338546 SEMA5BQ9P283 1151 aa15.27■□□□□ 0.03
HPS1-202ENST00000338546 LYVE1Q9Y5Y7 322 aa15.27■□□□□ 0.03
HPS1-202ENST00000338546 RNF215Q9Y6U7 377 aa15.27■□□□□ 0.03
HPS1-202ENST00000338546 SCN3AQ9NY46 2000 aa15.27■□□□□ 0.03
HPS1-202ENST00000338546 THADAQ6YHU6 1953 aa15.27■□□□□ 0.03
HPS1-202ENST00000338546 TP53BP1Q12888 1972 aaPredicted RBP15.26■□□□□ 0.03
HPS1-202ENST00000338546 PRAMEF27A3QJZ7 478 aa15.26■□□□□ 0.03
HPS1-202ENST00000338546 TNFRSF11BO00300 401 aa15.26■□□□□ 0.03
HPS1-202ENST00000338546 CASC3O15234 703 aaKnown RBP15.26■□□□□ 0.03
HPS1-202ENST00000338546 PLOD3O60568 738 aa15.26■□□□□ 0.03
HPS1-202ENST00000338546 NSA2O95478 260 aaKnown RBP15.26■□□□□ 0.03
HPS1-202ENST00000338546 CLPTM1O96005 669 aa15.26■□□□□ 0.03
HPS1-202ENST00000338546 FESP07332 822 aa15.26■□□□□ 0.03
HPS1-202ENST00000338546 RRM2P31350 389 aa15.26■□□□□ 0.03
HPS1-202ENST00000338546 FNTBP49356 437 aa15.26■□□□□ 0.03
HPS1-202ENST00000338546 DUSP7Q16829 419 aa15.26■□□□□ 0.03
HPS1-202ENST00000338546 ZNF628Q5EBL2 1059 aa15.26■□□□□ 0.03
HPS1-202ENST00000338546 PMS2CLQ68D20 193 aa15.26■□□□□ 0.03
HPS1-202ENST00000338546 CDC73Q6P1J9 531 aa15.26■□□□□ 0.03
HPS1-202ENST00000338546 FAM92BQ6ZTR7 304 aa15.26■□□□□ 0.03
HPS1-202ENST00000338546 THAP5Q7Z6K1 395 aa15.26■□□□□ 0.03
HPS1-202ENST00000338546 ZNF605Q86T29 641 aa15.26■□□□□ 0.03
HPS1-202ENST00000338546 PLXDC1Q8IUK5 500 aa15.26■□□□□ 0.03
HPS1-202ENST00000338546 SLC25A45Q8N413 288 aa15.26■□□□□ 0.03
HPS1-202ENST00000338546 TTC29Q8NA56 475 aaPredicted RBP15.26■□□□□ 0.03
HPS1-202ENST00000338546 TSPAN14Q8NG11 270 aa15.26■□□□□ 0.03
HPS1-202ENST00000338546 OR6C4Q8NGE1 309 aa15.26■□□□□ 0.03
HPS1-202ENST00000338546 OR7D2Q96RA2 312 aa15.26■□□□□ 0.03
HPS1-202ENST00000338546 DDX18Q9NVP1 670 aaKnown RBP15.26■□□□□ 0.03
HPS1-202ENST00000338546 SEC14L3Q9UDX4 400 aa15.26■□□□□ 0.03
HPS1-202ENST00000338546 KCND3Q9UK17 655 aa15.26■□□□□ 0.03
HPS1-202ENST00000338546 C19orf53Q9UNZ5 99 aaPredicted RBP15.26■□□□□ 0.03
HPS1-202ENST00000338546 MRPS33Q9Y291 106 aaKnown RBP15.26■□□□□ 0.03
HPS1-202ENST00000338546 HSPE1-MOB4S4R3N1 261 aa15.26■□□□□ 0.03
HPS1-202ENST00000338546 LOC100130705A0A1B0GUX0 176 aa15.25■□□□□ 0.03
HPS1-202ENST00000338546 ARRDC5A6NEK1 342 aa15.25■□□□□ 0.03
HPS1-202ENST00000338546 HCRTR1O43613 425 aa15.25■□□□□ 0.03
HPS1-202ENST00000338546 SDC3O75056 442 aa15.25■□□□□ 0.03
HPS1-202ENST00000338546 DIRAS1O95057 198 aa15.25■□□□□ 0.03
HPS1-202ENST00000338546 SLC35E2P0CK97 266 aa15.25■□□□□ 0.03
HPS1-202ENST00000338546 RNH1P13489 461 aaKnown RBP15.25■□□□□ 0.03
HPS1-202ENST00000338546 ANXA8P13928 327 aa15.25■□□□□ 0.03
HPS1-202ENST00000338546 PNLIPP16233 465 aa15.25■□□□□ 0.03
HPS1-202ENST00000338546 PRKACGP22612 351 aa15.25■□□□□ 0.03
HPS1-202ENST00000338546 MLLT3P42568 568 aaPredicted RBP15.25■□□□□ 0.03
HPS1-202ENST00000338546 DAPP51397 102 aa15.25■□□□□ 0.03
HPS1-202ENST00000338546 KCNAB2Q13303 367 aa15.25■□□□□ 0.03
HPS1-202ENST00000338546 BIKQ13323 160 aa15.25■□□□□ 0.03
HPS1-202ENST00000338546 SYPL1Q16563 259 aa15.25■□□□□ 0.03
HPS1-202ENST00000338546 ZIK1Q3SY52 487 aaPredicted RBP15.25■□□□□ 0.03
HPS1-202ENST00000338546 HEPHL1Q6MZM0 1159 aa15.25■□□□□ 0.03
HPS1-202ENST00000338546 MFSD12Q6NUT3 480 aa15.25■□□□□ 0.03
HPS1-202ENST00000338546 PRSS41Q7RTY9 318 aa15.25■□□□□ 0.03
HPS1-202ENST00000338546 CYP4Z1Q86W10 505 aa15.25■□□□□ 0.03
HPS1-202ENST00000338546 SLC44A2Q8IWA5 706 aaPredicted RBP15.25■□□□□ 0.03
HPS1-202ENST00000338546 C8orf59Q8N0T1 100 aaPredicted RBP15.25■□□□□ 0.03
HPS1-202ENST00000338546 SMYD1Q8NB12 490 aa15.25■□□□□ 0.03
HPS1-202ENST00000338546 OR5D16Q8NGK9 328 aa15.25■□□□□ 0.03
HPS1-202ENST00000338546 OR4C15Q8NGM1 316 aa15.25■□□□□ 0.03
HPS1-202ENST00000338546 GIPC3Q8TF64 312 aa15.25■□□□□ 0.03
HPS1-202ENST00000338546 GAB3Q8WWW8 586 aa15.25■□□□□ 0.03
HPS1-202ENST00000338546 FKBP10Q96AY3 582 aa15.25■□□□□ 0.03
HPS1-202ENST00000338546 AHCYL2Q96HN2 611 aaKnown RBP15.25■□□□□ 0.03
HPS1-202ENST00000338546 MAGED4Q96JG8 741 aa15.25■□□□□ 0.03
HPS1-202ENST00000338546 COL21A1Q96P44 957 aa15.25■□□□□ 0.03
HPS1-202ENST00000338546 TGM7Q96PF1 710 aa15.25■□□□□ 0.03
HPS1-202ENST00000338546 DUSP23Q9BVJ7 150 aa15.25■□□□□ 0.03
HPS1-202ENST00000338546 AMBRA1Q9C0C7 1298 aa15.25■□□□□ 0.03
HPS1-202ENST00000338546 TRIM45Q9H8W5 580 aaPredicted RBP15.25■□□□□ 0.03
HPS1-202ENST00000338546 GIN1Q9NXP7 522 aa15.25■□□□□ 0.03
HPS1-202ENST00000338546 SH3GLB1Q9Y371 365 aa15.25■□□□□ 0.03
HPS1-202ENST00000338546 IGHV1OR21-1A0A087WYE8 117 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 SMIM31A0A1B0GVY4 71 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 A0A1W2PS29 197 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 HYKKA2RU49 373 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 PRAMEF25A6NGN4 478 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 ZNF860A6NHJ4 632 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 TRIM64CA6NLI5 447 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 SGK494L7N484 410 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 SYT5O00445 386 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 YKT6O15498 198 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 CHST10O43529 356 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 DUX1O43812 170 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 DNAJB6O75190 326 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 GIMD1P0DJR0 217 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 ALPPL2P10696 532 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 RYKP34925 604 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 NR1H2P55055 460 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 SMIM11AP58511 58 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 OLR1P78380 273 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 SHC2P98077 582 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 PPP1R8Q12972 351 aaKnown RBP15.24■□□□□ 0.03
HPS1-202ENST00000338546 KEAP1Q14145 624 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 PUM1Q14671 1186 aaKnown RBP eCLIP15.24■□□□□ 0.03
HPS1-202ENST00000338546 FAM214AQ32MH5 1076 aa15.24■□□□□ 0.03
HPS1-202ENST00000338546 RPS26P11Q5JNZ5 115 aaPredicted RBP15.24■□□□□ 0.03
HPS1-202ENST00000338546 EXOSC6Q5RKV6 272 aaKnown RBP15.24■□□□□ 0.03
HPS1-202ENST00000338546 FHL5Q5TD97 284 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms