RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 OR1F2PQ96R84 312 aa13.81□□□□□ -0.2
CDK5RAP3-201ENST00000338399 EQTNQ9NQ60 294 aa13.81□□□□□ -0.2
CDK5RAP3-201ENST00000338399 NECTIN3Q9NQS3 549 aa13.81□□□□□ -0.2
CDK5RAP3-201ENST00000338399 MAT2BQ9NZL9 334 aa13.81□□□□□ -0.2
CDK5RAP3-201ENST00000338399 PTGFRNQ9P2B2 879 aa13.81□□□□□ -0.2
CDK5RAP3-201ENST00000338399 ANGPTL2Q9UKU9 493 aa13.81□□□□□ -0.2
CDK5RAP3-201ENST00000338399 AP4S1Q9Y587 144 aa13.81□□□□□ -0.2
CDK5RAP3-201ENST00000338399 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 HMGN4O00479 90 aa13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 SERPINA1P01009 418 aa13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 OR12D1P0DN82 309 aa13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 ARAFP10398 606 aa13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 PSMA4P25789 261 aaKnown RBP13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 CDK6Q00534 326 aa13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 INSM1Q01101 510 aaPredicted RBP13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 MC2RQ01718 297 aa13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 RBBP4Q09028 425 aa13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 MGAT2Q10469 447 aa13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 ILKQ13418 452 aa13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 SCARB2Q14108 478 aa13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 MINDY4Q4G0A6 757 aa13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 LRRC23Q53EV4 343 aaPredicted RBP13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 MTX3Q5HYI7 312 aa13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 STPG1Q5TH74 334 aa13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 ST13P4Q8IZP2 240 aaPredicted RBP13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 OR2L13Q8N349 312 aa13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 GOLM1Q8NBJ4 401 aa13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 OR52E4Q8NGH9 312 aa13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 GIMAP5Q96F15 307 aa13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 PTCHD1Q96NR3 888 aa13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 SEPHS2Q99611 448 aa13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 CCM2LQ9NUG4 571 aaPredicted RBP13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 DCAF13Q9NV06 445 aaKnown RBP13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 NTMQ9P121 344 aa13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 ANAPC2Q9UJX6 822 aa13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 CCDC88CQ9P219 2028 aa13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 PCNX2A6NKB5 2137 aa13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 GPIP06744 558 aa13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 HBQ1P09105 142 aa13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 UMPSP11172 480 aa13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 AQP1P29972 269 aa13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 KDELR2P33947 212 aa13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 EEF1A2Q05639 463 aaKnown RBP13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 ZNF630Q2M218 657 aaPredicted RBP13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 FHL5Q5TD97 284 aa13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 COX15Q7KZN9 410 aa13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 PACS2Q86VP3 889 aa13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 SLC44A2Q8IWA5 706 aaPredicted RBP13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 PRSS58Q8IYP2 241 aa13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 ZNF675Q8TD23 568 aa13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 XAGE5Q8WWM1 108 aa13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 DGAT2Q96PD7 388 aa13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 ASPSCR1Q9BZE9 553 aa13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 CXorf21Q9HAI6 301 aa13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 MKKSQ9NPJ1 570 aaPredicted RBP13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 SLC22A11Q9NSA0 550 aa13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 C19orf53Q9UNZ5 99 aaPredicted RBP13.8□□□□□ -0.2
CDK5RAP3-201ENST00000338399 PLOD3O60568 738 aa13.79□□□□□ -0.2
CDK5RAP3-201ENST00000338399 SLITRK5O94991 958 aa13.79□□□□□ -0.2
CDK5RAP3-201ENST00000338399 IL10P22301 178 aa13.79□□□□□ -0.2
CDK5RAP3-201ENST00000338399 KHKP50053 298 aa13.79□□□□□ -0.2
CDK5RAP3-201ENST00000338399 TBCELQ5QJ74 424 aa13.79□□□□□ -0.2
CDK5RAP3-201ENST00000338399 ENPP6Q6UWR7 440 aa13.79□□□□□ -0.2
CDK5RAP3-201ENST00000338399 MED25Q71SY5 747 aa13.79□□□□□ -0.2
CDK5RAP3-201ENST00000338399 WDR53Q7Z5U6 358 aaPredicted RBP13.79□□□□□ -0.2
CDK5RAP3-201ENST00000338399 PIP4P1Q86T03 277 aa13.79□□□□□ -0.2
CDK5RAP3-201ENST00000338399 FAM86B1Q8N7N1 296 aa13.79□□□□□ -0.2
CDK5RAP3-201ENST00000338399 SLC38A5Q8WUX1 472 aa13.79□□□□□ -0.2
CDK5RAP3-201ENST00000338399 RIT1Q92963 219 aa13.79□□□□□ -0.2
CDK5RAP3-201ENST00000338399 CTHRC1Q96CG8 243 aa13.79□□□□□ -0.2
CDK5RAP3-201ENST00000338399 MS4A4EQ96PG1 132 aa13.79□□□□□ -0.2
CDK5RAP3-201ENST00000338399 CMKLR1Q99788 373 aa13.79□□□□□ -0.2
CDK5RAP3-201ENST00000338399 ADAP2Q9NPF8 381 aa13.79□□□□□ -0.2
CDK5RAP3-201ENST00000338399 FBXO8Q9NRD0 319 aa13.79□□□□□ -0.2
CDK5RAP3-201ENST00000338399 TOR4AQ9NXH8 423 aa13.79□□□□□ -0.2
CDK5RAP3-201ENST00000338399 AKAP7Q9P0M2 348 aaPredicted RBP13.79□□□□□ -0.2
CDK5RAP3-201ENST00000338399 CTSFQ9UBX1 484 aa13.79□□□□□ -0.2
CDK5RAP3-201ENST00000338399 MMACHCQ9Y4U1 282 aa13.79□□□□□ -0.2
CDK5RAP3-201ENST00000338399 A0A087WV62 115 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 GCM2O75603 506 aaPredicted RBP13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 PRKD3O94806 890 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 IFNA16P05015 189 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 BCHEP06276 602 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 TFPTP0C1Z6 253 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 STT3AP46977 705 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 ANXA11P50995 505 aaKnown RBP13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 DCDP81605 110 aaKnown RBP13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 MAP4K2Q12851 820 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 SERTAD2Q14140 314 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 EXOSC7Q15024 291 aaKnown RBP13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 TRIP6Q15654 476 aaKnown RBP13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.78□□□□□ -0.21e-6■□□□□ 10.2
CDK5RAP3-201ENST00000338399 NKAIN1Q4KMZ8 207 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 QSOX2Q6ZRP7 698 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 LAPTM4BQ86VI4 370 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 GALNT12Q8IXK2 581 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 LILRA2Q8N149 483 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 PQLC1Q8N2U9 271 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 OR10Q1Q8NGQ4 319 aa13.78□□□□□ -0.2
CDK5RAP3-201ENST00000338399 MIPOL1Q8TD10 442 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms