RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 VARS2Q5ST30 1063 aaKnown RBP12.62□□□□□ -0.39
COL2A1-201ENST00000337299 IRAK1BP1Q5VVH5 260 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 TMEM145Q8NBT3 493 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 QRSL1Q9H0R6 528 aaKnown RBP12.62□□□□□ -0.39
COL2A1-201ENST00000337299 ZNF304Q9HCX3 659 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 THSD1Q9NS62 852 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 FARSAQ9Y285 508 aaKnown RBP12.62□□□□□ -0.39
COL2A1-201ENST00000337299 PRAMEF11O60813 436 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 SERPINA3P01011 423 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 RPLP2P05387 115 aaKnown RBP12.62□□□□□ -0.39
COL2A1-201ENST00000337299 CBR1P16152 277 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 ZNF792Q3KQV3 632 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 PKDCCQ504Y2 493 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 PM20D1Q6GTS8 502 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 SLC30A6Q6NXT4 461 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 AGTRAPQ6RW13 159 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 THAP6Q8TBB0 222 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 TSEN15Q8WW01 171 aaKnown RBP12.62□□□□□ -0.39
COL2A1-201ENST00000337299 SCLYQ96I15 445 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 DDOQ99489 341 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 CLMPQ9H6B4 373 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 ZSCAN32Q9NX65 697 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 FBXL12Q9NXK8 326 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 ERVK-19Q9WJR5 959 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 TMEM5Q9Y2B1 443 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 STRCP1A6NGW2 1772 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 A0A1B0GUL6 1792 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 A0A1B0GVM2 712 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 TRAPPC2P0DI81 140 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 TRAPPC2BP0DI82 140 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 JUNDP17535 347 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 NUDT1P36639 197 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 PREPP48147 710 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 SRP9P49458 86 aaKnown RBP12.62□□□□□ -0.39
COL2A1-201ENST00000337299 EPHB3P54753 998 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 DUSP7Q16829 419 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 IGSF11Q5DX21 431 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 KRBOX4Q5JUW0 171 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 RAET1GQ6H3X3 334 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 BRAT1Q6PJG6 821 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 LYPD4Q6UWN0 246 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 ZNF627Q7L945 461 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 TRIB2Q92519 343 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 ZNF768Q9H5H4 540 aaKnown RBP12.62□□□□□ -0.39
COL2A1-201ENST00000337299 SDHAF2Q9NX18 166 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 SLC25A37Q9NYZ2 338 aa12.62□□□□□ -0.39
COL2A1-201ENST00000337299 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.61□□□□□ -0.39
COL2A1-201ENST00000337299 H7C0S8 307 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 M0R082 166 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 M0R3H8 397 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 CA12O43570 354 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 ARL6IP5O75915 188 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 PAK4O96013 591 aaPredicted RBP12.61□□□□□ -0.39
COL2A1-201ENST00000337299 MPP7Q5T2T1 576 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 C18orf63Q68DL7 685 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 PLBD1Q6P4A8 553 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 SLC24A5Q71RS6 500 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 ZFP82Q8N141 532 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 C2CD4CQ8TF44 421 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 TCEAL3Q969E4 200 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 DCLRE1CQ96SD1 692 aaKnown RBP12.61□□□□□ -0.39
COL2A1-201ENST00000337299 C1QTNF6Q9BXI9 259 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 ZNF350Q9GZX5 532 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 MFFQ9GZY8 342 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 NT5DC2Q9H857 520 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 RDH14Q9HBH5 336 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 SNX11Q9Y5W9 270 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 COL1A2P08123 1366 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 SCO2O43819 266 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 SLC43A1O75387 559 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 GASTP01350 101 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 HMGN1P05114 100 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 SYPP08247 313 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 RD3LP0DJH9 198 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 GSTM3P21266 225 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 GBX2P52951 348 aaPredicted RBP12.61□□□□□ -0.39
COL2A1-201ENST00000337299 TCTE1Q5JU00 501 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 PROKR2Q8NFJ6 384 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 OR4F15Q8NGB8 312 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 PEX13Q92968 403 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 C12orf57Q99622 126 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 C16orf70Q9BSU1 422 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 CNIH4Q9P003 139 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 C5AR2Q9P296 337 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 TMEFF2Q9UIK5 374 aaPredicted RBP12.61□□□□□ -0.39
COL2A1-201ENST00000337299 GRXCR2A6NFK2 248 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 ERVH48-1M5A8F1 160 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 AGPAT2O15120 278 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 CSO75390 466 aaKnown RBP12.61□□□□□ -0.39
COL2A1-201ENST00000337299 ADAP00813 363 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 PRH1P02810 166 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 HLA-EP13747 358 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 GPR4P46093 362 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 PRMT2P55345 433 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 MC1RQ01726 317 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 ASAH1Q13510 395 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 PCBP1Q15365 356 aaKnown RBP eCLIP12.61□□□□□ -0.39
COL2A1-201ENST00000337299 ZNF467Q7Z7K2 595 aaPredicted RBP12.61□□□□□ -0.39
COL2A1-201ENST00000337299 SERPINA11Q86U17 422 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 OAFQ86UD1 273 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms