RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 TCEA2Q15560 299 aa16.71■□□□□ 0.27
LRCH3-201ENST00000334859 C12orf73Q69YU5 71 aa16.71■□□□□ 0.27
LRCH3-201ENST00000334859 FAM109BQ6ICB4 259 aaPredicted RBP16.71■□□□□ 0.27
LRCH3-201ENST00000334859 TMEM107Q6UX40 140 aa16.71■□□□□ 0.27
LRCH3-201ENST00000334859 ATCAYQ86WG3 371 aa16.71■□□□□ 0.27
LRCH3-201ENST00000334859 CCDC116Q8IYX3 515 aa16.71■□□□□ 0.27
LRCH3-201ENST00000334859 CADM3Q8N126 398 aa16.71■□□□□ 0.27
LRCH3-201ENST00000334859 CYP4Z2PQ8N1L4 340 aa16.71■□□□□ 0.27
LRCH3-201ENST00000334859 FBXL6Q8N531 539 aa16.71■□□□□ 0.27
LRCH3-201ENST00000334859 ACOT4Q8N9L9 421 aa16.71■□□□□ 0.27
LRCH3-201ENST00000334859 ZNF784Q8NCA9 323 aaPredicted RBP16.71■□□□□ 0.27
LRCH3-201ENST00000334859 OR8J1Q8NGP2 316 aa16.71■□□□□ 0.27
LRCH3-201ENST00000334859 BBS10Q8TAM1 723 aa16.71■□□□□ 0.27
LRCH3-201ENST00000334859 JPH3Q8WXH2 748 aaPredicted RBP16.71■□□□□ 0.27
LRCH3-201ENST00000334859 MS4A6EQ96DS6 147 aa16.71■□□□□ 0.27
LRCH3-201ENST00000334859 KXD1Q9BQD3 176 aa16.71■□□□□ 0.27
LRCH3-201ENST00000334859 TRMT61BQ9BVS5 477 aaKnown RBP16.71■□□□□ 0.27
LRCH3-201ENST00000334859 NXF2Q9GZY0 626 aaKnown RBP16.71■□□□□ 0.27
LRCH3-201ENST00000334859 EXOSC4Q9NPD3 245 aaKnown RBP16.71■□□□□ 0.27
LRCH3-201ENST00000334859 FZD3Q9NPG1 666 aa16.71■□□□□ 0.27
LRCH3-201ENST00000334859 GIN1Q9NXP7 522 aa16.71■□□□□ 0.27
LRCH3-201ENST00000334859 CLEC2DQ9UHP7 191 aa16.71■□□□□ 0.27
LRCH3-201ENST00000334859 A0A1W2PR48 441 aa16.71■□□□□ 0.27
LRCH3-201ENST00000334859 A0A1W2PRQ8 180 aa16.71■□□□□ 0.27
LRCH3-201ENST00000334859 CERS1P27544 350 aa16.71■□□□□ 0.27
LRCH3-201ENST00000334859 MAT2AP31153 395 aaKnown RBP16.71■□□□□ 0.27
LRCH3-201ENST00000334859 CSTF2P33240 577 aaKnown RBP eCLIP16.71■□□□□ 0.273e-7■■■■□ 20.5
LRCH3-201ENST00000334859 SSX1Q16384 188 aa16.71■□□□□ 0.27
LRCH3-201ENST00000334859 GPAT3Q53EU6 434 aa16.71■□□□□ 0.27
LRCH3-201ENST00000334859 TOR1AIP1Q5JTV8 583 aa16.71■□□□□ 0.27
LRCH3-201ENST00000334859 IQCHQ86VS3 1027 aa16.71■□□□□ 0.27
LRCH3-201ENST00000334859 LYSMD2Q8IV50 215 aa16.71■□□□□ 0.27
LRCH3-201ENST00000334859 C7orf61Q8IZ16 206 aa16.71■□□□□ 0.27
LRCH3-201ENST00000334859 TMEM145Q8NBT3 493 aa16.71■□□□□ 0.27
LRCH3-201ENST00000334859 OR4K5Q8NGD3 323 aa16.71■□□□□ 0.27
LRCH3-201ENST00000334859 OR6T1Q8NGN1 323 aa16.71■□□□□ 0.27
LRCH3-201ENST00000334859 OPALINQ96PE5 141 aa16.71■□□□□ 0.27
LRCH3-201ENST00000334859 SPATA5L1Q9BVQ7 753 aa16.71■□□□□ 0.27
LRCH3-201ENST00000334859 PLA2G2FQ9BZM2 168 aa16.71■□□□□ 0.27
LRCH3-201ENST00000334859 BTBD1Q9H0C5 482 aa16.71■□□□□ 0.27
LRCH3-201ENST00000334859 MTIF3Q9H2K0 278 aaKnown RBP16.71■□□□□ 0.27
LRCH3-201ENST00000334859 TRPV4Q9HBA0 871 aa16.71■□□□□ 0.27
LRCH3-201ENST00000334859 TVP23BQ9NYZ1 205 aa16.71■□□□□ 0.27
LRCH3-201ENST00000334859 NDOR1Q9UHB4 597 aa16.71■□□□□ 0.27
LRCH3-201ENST00000334859 CFL2Q9Y281 166 aa16.71■□□□□ 0.27
LRCH3-201ENST00000334859 KLHL20Q9Y2M5 609 aa16.71■□□□□ 0.27
LRCH3-201ENST00000334859 AIFM1O95831 613 aa16.7■□□□□ 0.26
LRCH3-201ENST00000334859 DNTTP04053 509 aa16.7■□□□□ 0.26
LRCH3-201ENST00000334859 CEACAM5P06731 702 aa16.7■□□□□ 0.26
LRCH3-201ENST00000334859 ANXA11P50995 505 aaKnown RBP16.7■□□□□ 0.26
LRCH3-201ENST00000334859 LIMK1P53667 647 aa16.7■□□□□ 0.26
LRCH3-201ENST00000334859 RAB8AP61006 207 aa16.7■□□□□ 0.26
LRCH3-201ENST00000334859 FUT5Q11128 374 aa16.7■□□□□ 0.26
LRCH3-201ENST00000334859 AGERQ15109 404 aa16.7■□□□□ 0.26
LRCH3-201ENST00000334859 C2orf27AQ580R0 203 aa16.7■□□□□ 0.26
LRCH3-201ENST00000334859 STEAP3Q658P3 488 aa16.7■□□□□ 0.26
LRCH3-201ENST00000334859 ABHD17CQ6PCB6 329 aa16.7■□□□□ 0.26
LRCH3-201ENST00000334859 BHLHB9Q6PI77 547 aa16.7■□□□□ 0.26
LRCH3-201ENST00000334859 ZBTB8BQ8NAP8 495 aaPredicted RBP16.7■□□□□ 0.26
LRCH3-201ENST00000334859 OR14C36Q8NHC7 312 aa16.7■□□□□ 0.26
LRCH3-201ENST00000334859 HTRA1Q92743 480 aa16.7■□□□□ 0.26
LRCH3-201ENST00000334859 CNRIP1Q96F85 164 aaPredicted RBP16.7■□□□□ 0.26
LRCH3-201ENST00000334859 TMEM80Q96HE8 168 aa16.7■□□□□ 0.26
LRCH3-201ENST00000334859 FUZQ9BT04 418 aa16.7■□□□□ 0.26
LRCH3-201ENST00000334859 TMEM106CQ9BVX2 250 aa16.7■□□□□ 0.26
LRCH3-201ENST00000334859 TSSK6Q9BXA6 273 aa16.7■□□□□ 0.26
LRCH3-201ENST00000334859 QRSL1Q9H0R6 528 aaKnown RBP16.7■□□□□ 0.26
LRCH3-201ENST00000334859 EQTNQ9NQ60 294 aa16.7■□□□□ 0.26
LRCH3-201ENST00000334859 RPL36Q9Y3U8 105 aaKnown RBP16.7■□□□□ 0.26
LRCH3-201ENST00000334859 A0A1W2PQU0 124 aa16.7■□□□□ 0.26
LRCH3-201ENST00000334859 MMP11P24347 488 aa16.7■□□□□ 0.26
LRCH3-201ENST00000334859 ATP5A1P25705 553 aaKnown RBP16.7■□□□□ 0.26
LRCH3-201ENST00000334859 RPS21P63220 83 aaKnown RBP16.7■□□□□ 0.26
LRCH3-201ENST00000334859 DUSP2Q05923 314 aa16.7■□□□□ 0.26
LRCH3-201ENST00000334859 HYAL2Q12891 473 aa16.7■□□□□ 0.26
LRCH3-201ENST00000334859 ZIC1Q15915 447 aa16.7■□□□□ 0.26
LRCH3-201ENST00000334859 DUSP6Q16828 381 aa16.7■□□□□ 0.26
LRCH3-201ENST00000334859 ZNF181Q2M3W8 571 aa16.7■□□□□ 0.26
LRCH3-201ENST00000334859 UAP1L1Q3KQV9 507 aa16.7■□□□□ 0.26
LRCH3-201ENST00000334859 TMEM201Q5SNT2 666 aa16.7■□□□□ 0.26
LRCH3-201ENST00000334859 AGAP7PQ5VUJ5 663 aa16.7■□□□□ 0.26
LRCH3-201ENST00000334859 MEDAGQ5VYS4 303 aa16.7■□□□□ 0.26
LRCH3-201ENST00000334859 C18orf63Q68DL7 685 aa16.7■□□□□ 0.26
LRCH3-201ENST00000334859 NUDT18Q6ZVK8 323 aa16.7■□□□□ 0.26
LRCH3-201ENST00000334859 PARP16Q8N5Y8 322 aa16.7■□□□□ 0.26
LRCH3-201ENST00000334859 OR2L3Q8NG85 312 aa16.7■□□□□ 0.26
LRCH3-201ENST00000334859 SUN3Q8TAQ9 357 aa16.7■□□□□ 0.26
LRCH3-201ENST00000334859 SLC6A18Q96N87 628 aa16.7■□□□□ 0.26
LRCH3-201ENST00000334859 FBXL12Q9NXK8 326 aa16.7■□□□□ 0.26
LRCH3-201ENST00000334859 SPHK1Q9NYA1 384 aa16.7■□□□□ 0.26
LRCH3-201ENST00000334859 SCHIP1Q9P0W5 487 aaPredicted RBP16.7■□□□□ 0.26
LRCH3-201ENST00000334859 ASB4Q9Y574 426 aa16.7■□□□□ 0.26
LRCH3-201ENST00000334859 PEX16Q9Y5Y5 336 aa16.7■□□□□ 0.26
LRCH3-201ENST00000334859 A0A1W2PS29 197 aa16.69■□□□□ 0.26
LRCH3-201ENST00000334859 ZSCAN9O15535 394 aaPredicted RBP16.69■□□□□ 0.26
LRCH3-201ENST00000334859 GUCY1B2O75343 617 aa16.69■□□□□ 0.26
LRCH3-201ENST00000334859 SLITRK5O94991 958 aa16.69■□□□□ 0.26
LRCH3-201ENST00000334859 MED26O95402 600 aa16.69■□□□□ 0.26
LRCH3-201ENST00000334859 SCG5P05408 212 aa16.69■□□□□ 0.26
LRCH3-201ENST00000334859 IMPDH2P12268 514 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms