RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 SERPINA4P29622 427 aa13.02□□□□□ -0.32
SYNE3-201ENST00000334258 TAS2R50P59544 299 aa13.02□□□□□ -0.32
SYNE3-201ENST00000334258 DEFB103AP81534 67 aa13.02□□□□□ -0.32
SYNE3-201ENST00000334258 FABP5Q01469 135 aa13.02□□□□□ -0.32
SYNE3-201ENST00000334258 FCN2Q15485 313 aa13.02□□□□□ -0.32
SYNE3-201ENST00000334258 ZNF770Q6IQ21 691 aaPredicted RBP13.02□□□□□ -0.32
SYNE3-201ENST00000334258 REEP3Q6NUK4 255 aa13.02□□□□□ -0.32
SYNE3-201ENST00000334258 FAM92BQ6ZTR7 304 aa13.02□□□□□ -0.32
SYNE3-201ENST00000334258 LHFPL3Q86UP9 236 aa13.02□□□□□ -0.32
SYNE3-201ENST00000334258 RBM45Q8IUH3 476 aaKnown RBP13.02□□□□□ -0.32
SYNE3-201ENST00000334258 DUSP18Q8NEJ0 188 aa13.02□□□□□ -0.32
SYNE3-201ENST00000334258 PAWRQ96IZ0 340 aaKnown RBP13.02□□□□□ -0.32
SYNE3-201ENST00000334258 MARVELD1Q9BSK0 173 aa13.02□□□□□ -0.32
SYNE3-201ENST00000334258 NLNQ9BYT8 704 aa13.02□□□□□ -0.32
SYNE3-201ENST00000334258 TMEM38AQ9H6F2 299 aa13.02□□□□□ -0.32
SYNE3-201ENST00000334258 SLC28A3Q9HAS3 691 aa13.02□□□□□ -0.32
SYNE3-201ENST00000334258 RC3H2Q9HBD1 1191 aaKnown RBP13.02□□□□□ -0.32
SYNE3-201ENST00000334258 CTPS2Q9NRF8 586 aa13.02□□□□□ -0.32
SYNE3-201ENST00000334258 PATJQ8NI35 1801 aa13.02□□□□□ -0.33
SYNE3-201ENST00000334258 THSD7BQ9C0I4 1608 aa13.02□□□□□ -0.33
SYNE3-201ENST00000334258 TRAV6A0A075B6T7 132 aa13.02□□□□□ -0.33
SYNE3-201ENST00000334258 CIB4A0PJX0 185 aa13.02□□□□□ -0.33
SYNE3-201ENST00000334258 ZNF840PA6NDX5 716 aa13.02□□□□□ -0.33
SYNE3-201ENST00000334258 CSF2RAP15509 400 aa13.02□□□□□ -0.33
SYNE3-201ENST00000334258 ZNF8P17098 575 aaPredicted RBP13.02□□□□□ -0.33
SYNE3-201ENST00000334258 LHCGRP22888 699 aa13.02□□□□□ -0.33
SYNE3-201ENST00000334258 SF3A2Q15428 464 aaKnown RBP13.02□□□□□ -0.33
SYNE3-201ENST00000334258 SPDYE7PQ495Y7 208 aa13.02□□□□□ -0.33
SYNE3-201ENST00000334258 BICRALQ6AI39 1079 aa13.02□□□□□ -0.33
SYNE3-201ENST00000334258 KRT74Q7RTS7 529 aa13.02□□□□□ -0.33
SYNE3-201ENST00000334258 MARCH9Q86YJ5 346 aa13.02□□□□□ -0.33
SYNE3-201ENST00000334258 WFDC5Q8TCV5 224 aa13.02□□□□□ -0.33
SYNE3-201ENST00000334258 TMEM43Q9BTV4 400 aa13.02□□□□□ -0.33
SYNE3-201ENST00000334258 PPP1R3EQ9H7J1 279 aa13.02□□□□□ -0.33
SYNE3-201ENST00000334258 CBX5P45973 191 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 CCT3P49368 545 aaKnown RBP13.01□□□□□ -0.33
SYNE3-201ENST00000334258 DGKGP49619 791 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 ELOAQ14241 798 aaKnown RBP13.01□□□□□ -0.33
SYNE3-201ENST00000334258 SYTL3Q4VX76 610 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 KLHL22Q53GT1 634 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 SYT14P1Q58G82 188 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 B3GLCTQ6Y288 498 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 COMMD6Q7Z4G1 85 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 C9orf62Q8N4C0 152 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 OR6C4Q8NGE1 309 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 SLC9A6Q92581 669 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 PLD4Q96BZ4 506 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 TEFMQ96QE5 360 aaKnown RBP13.01□□□□□ -0.33
SYNE3-201ENST00000334258 TRPM5Q9NZQ8 1165 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 DIMT1Q9UNQ2 313 aaKnown RBP13.01□□□□□ -0.33
SYNE3-201ENST00000334258 EXO1Q9UQ84 846 aaKnown RBP13.01□□□□□ -0.33
SYNE3-201ENST00000334258 CLCA2Q9UQC9 943 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 GPR52Q9Y2T5 361 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 PRR23AA6NEV1 266 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 ARAFP10398 606 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 ATP1B2P14415 290 aaPredicted RBP13.01□□□□□ -0.33
SYNE3-201ENST00000334258 ZNF250P15622 560 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 ELAVL4P26378 380 aaKnown RBP13.01□□□□□ -0.33
SYNE3-201ENST00000334258 ATP6V1E1P36543 226 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 SMAD3P84022 425 aaKnown RBP13.01□□□□□ -0.33
SYNE3-201ENST00000334258 PIN1Q13526 163 aaPredicted RBP13.01□□□□□ -0.33
SYNE3-201ENST00000334258 FGFBP1Q14512 234 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 CCSMST1Q4G0I0 132 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 FAM26DQ5JW98 314 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 GRHL2Q6ISB3 625 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 MZT2AQ6P582 158 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 MEX3DQ86XN8 651 aaKnown RBP13.01□□□□□ -0.33
SYNE3-201ENST00000334258 ZNF680Q8NEM1 530 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 NEIL3Q8TAT5 605 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 ASZ1Q8WWH4 475 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.01□□□□□ -0.33
SYNE3-201ENST00000334258 EVA1BQ9NVM1 165 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 NUP50Q9UKX7 468 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 KCNE2Q9Y6J6 123 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 A0A1B0GVC2 190 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 C2orf92A0A1B0GVN3 265 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 A6NIN4 97 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 ARHGEF33A8MVX0 844 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 GFYI3L273 518 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 UGDHO60701 494 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 GPR37L1O60883 481 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 KLK1P06870 262 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 CELP19835 753 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 EVX1P49640 407 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 TCTN3Q6NUS6 607 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 MED27Q6P2C8 311 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 UNC5DQ6UXZ4 953 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 LUZP2Q86TE4 346 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 TTLQ8NG68 377 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.01□□□□□ -0.33
SYNE3-201ENST00000334258 TMEM163Q8TC26 289 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 SAMD11Q96NU1 681 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 LINC00597Q9H2U6 94 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 ZNF624Q9P2J8 865 aaPredicted RBP13.01□□□□□ -0.33
SYNE3-201ENST00000334258 CPNE7Q9UBL6 633 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 STOML2Q9UJZ1 356 aa13.01□□□□□ -0.33
SYNE3-201ENST00000334258 H0YIV9 168 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 LINC01387J3KSC0 135 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 SLC16A8O95907 504 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 HSD3B1P14060 373 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms