RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 UGT2B17O75795 530 aa17.86■□□□□ 0.45
RFTN1-201ENST00000334133 HIST1H1TP22492 207 aaPredicted RBP17.86■□□□□ 0.45
RFTN1-201ENST00000334133 PKLRP30613 574 aa17.86■□□□□ 0.45
RFTN1-201ENST00000334133 FRKP42685 505 aaPredicted RBP17.86■□□□□ 0.45
RFTN1-201ENST00000334133 RNF144AP50876 292 aaPredicted RBP17.86■□□□□ 0.45
RFTN1-201ENST00000334133 XKP51811 444 aa17.86■□□□□ 0.45
RFTN1-201ENST00000334133 FUT5Q11128 374 aa17.86■□□□□ 0.45
RFTN1-201ENST00000334133 SLC13A2Q13183 592 aa17.86■□□□□ 0.45
RFTN1-201ENST00000334133 PGBD2Q6P3X8 592 aa17.86■□□□□ 0.45
RFTN1-201ENST00000334133 PSD4Q8NDX1 1056 aa17.86■□□□□ 0.45
RFTN1-201ENST00000334133 SIMC1Q8NDZ2 872 aa17.86■□□□□ 0.45
RFTN1-201ENST00000334133 MGLLQ99685 303 aa17.86■□□□□ 0.45
RFTN1-201ENST00000334133 A4GNTQ9UNA3 340 aa17.86■□□□□ 0.45
RFTN1-201ENST00000334133 K7EQS6 105 aa17.86■□□□□ 0.45
RFTN1-201ENST00000334133 BTN3A3O00478 584 aa17.86■□□□□ 0.45
RFTN1-201ENST00000334133 RPLP0P05388 317 aaKnown RBP17.86■□□□□ 0.45
RFTN1-201ENST00000334133 OSMP13725 252 aa17.86■□□□□ 0.45
RFTN1-201ENST00000334133 RPE65Q16518 533 aa17.86■□□□□ 0.45
RFTN1-201ENST00000334133 ZNF404Q494X3 552 aa17.86■□□□□ 0.45
RFTN1-201ENST00000334133 SLC34A3Q8N130 599 aa17.86■□□□□ 0.45
RFTN1-201ENST00000334133 FAM46DQ8NEK8 389 aa17.86■□□□□ 0.45
RFTN1-201ENST00000334133 OR9A2Q8NGT5 310 aa17.86■□□□□ 0.45
RFTN1-201ENST00000334133 SUN3Q8TAQ9 357 aa17.86■□□□□ 0.45
RFTN1-201ENST00000334133 BCL7BQ9BQE9 202 aa17.86■□□□□ 0.45
RFTN1-201ENST00000334133 MTIF3Q9H2K0 278 aaKnown RBP17.86■□□□□ 0.45
RFTN1-201ENST00000334133 EXOSC4Q9NPD3 245 aaKnown RBP17.86■□□□□ 0.45
RFTN1-201ENST00000334133 PRDM7Q9NQW5 492 aa17.86■□□□□ 0.45
RFTN1-201ENST00000334133 TBC1D29Q9UFV1 150 aa17.86■□□□□ 0.45
RFTN1-201ENST00000334133 APOBEC3BQ9UH17 382 aaKnown RBP17.86■□□□□ 0.45
RFTN1-201ENST00000334133 PNMA8CA0A1B0GUJ8 204 aa17.85■□□□□ 0.45
RFTN1-201ENST00000334133 KRBA1A5PL33 1030 aa17.85■□□□□ 0.45
RFTN1-201ENST00000334133 WWP2O00308 870 aa17.85■□□□□ 0.45
RFTN1-201ENST00000334133 SERPINB7O75635 380 aa17.85■□□□□ 0.45
RFTN1-201ENST00000334133 CDH3P22223 829 aa17.85■□□□□ 0.45
RFTN1-201ENST00000334133 NTSP30990 170 aa17.85■□□□□ 0.45
RFTN1-201ENST00000334133 MC3RP41968 323 aa17.85■□□□□ 0.45
RFTN1-201ENST00000334133 RPS21P63220 83 aaKnown RBP17.85■□□□□ 0.45
RFTN1-201ENST00000334133 TFF2Q03403 129 aa17.85■□□□□ 0.45
RFTN1-201ENST00000334133 MLIPQ5VWP3 458 aa17.85■□□□□ 0.45
RFTN1-201ENST00000334133 ABHD17CQ6PCB6 329 aa17.85■□□□□ 0.45
RFTN1-201ENST00000334133 IQCHQ86VS3 1027 aa17.85■□□□□ 0.45
RFTN1-201ENST00000334133 FBXO8Q9NRD0 319 aa17.85■□□□□ 0.45
RFTN1-201ENST00000334133 QPCTLQ9NXS2 382 aa17.85■□□□□ 0.45
RFTN1-201ENST00000334133 CAB39Q9Y376 341 aaPredicted RBP17.85■□□□□ 0.45
RFTN1-201ENST00000334133 MRPS14O60783 128 aaKnown RBP17.85■□□□□ 0.45
RFTN1-201ENST00000334133 ADH1BP00325 375 aa17.85■□□□□ 0.45
RFTN1-201ENST00000334133 ATP5A1P25705 553 aaKnown RBP17.85■□□□□ 0.45
RFTN1-201ENST00000334133 UGT2B15P54855 530 aa17.85■□□□□ 0.45
RFTN1-201ENST00000334133 MLLT1Q03111 559 aaPredicted RBP17.85■□□□□ 0.45
RFTN1-201ENST00000334133 RELAQ04206 551 aa17.85■□□□□ 0.45
RFTN1-201ENST00000334133 SYCE2Q6PIF2 218 aa17.85■□□□□ 0.45
RFTN1-201ENST00000334133 OR4N5Q8IXE1 308 aa17.85■□□□□ 0.45
RFTN1-201ENST00000334133 TBC1D19Q8N5T2 526 aa17.85■□□□□ 0.45
RFTN1-201ENST00000334133 OR2L8Q8NGY9 312 aa17.85■□□□□ 0.45
RFTN1-201ENST00000334133 S100ZQ8WXG8 99 aa17.85■□□□□ 0.45
RFTN1-201ENST00000334133 TSACCQ96A04 125 aaPredicted RBP17.85■□□□□ 0.45
RFTN1-201ENST00000334133 APOOQ9BUR5 198 aa17.85■□□□□ 0.45
RFTN1-201ENST00000334133 FNDC11Q9BVV2 318 aa17.85■□□□□ 0.45
RFTN1-201ENST00000334133 ACSS1Q9NUB1 689 aaPredicted RBP17.85■□□□□ 0.45
RFTN1-201ENST00000334133 B3GNT3Q9Y2A9 372 aa17.85■□□□□ 0.45
RFTN1-201ENST00000334133 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.85■□□□□ 0.45
RFTN1-201ENST00000334133 ASB4Q9Y574 426 aa17.85■□□□□ 0.45
RFTN1-201ENST00000334133 DNMT3AQ9Y6K1 912 aaPredicted RBP17.85■□□□□ 0.45
RFTN1-201ENST00000334133 TBX1O43435 398 aa17.85■□□□□ 0.45
RFTN1-201ENST00000334133 PDE9AO76083 593 aa17.85■□□□□ 0.45
RFTN1-201ENST00000334133 GTF2E2P29084 291 aaKnown RBP17.85■□□□□ 0.45
RFTN1-201ENST00000334133 BTN3A2P78410 334 aa17.85■□□□□ 0.45
RFTN1-201ENST00000334133 SHHQ15465 462 aa17.85■□□□□ 0.45
RFTN1-201ENST00000334133 CARTPTQ16568 116 aa17.85■□□□□ 0.45
RFTN1-201ENST00000334133 ITPRIPL2Q3MIP1 535 aa17.85■□□□□ 0.45
RFTN1-201ENST00000334133 TMEM196Q5HYL7 178 aa17.85■□□□□ 0.45
RFTN1-201ENST00000334133 TPRG1LQ5T0D9 272 aa17.85■□□□□ 0.45
RFTN1-201ENST00000334133 ZNF776Q68DI1 518 aaPredicted RBP17.85■□□□□ 0.45
RFTN1-201ENST00000334133 SLC30A8Q8IWU4 369 aa17.85■□□□□ 0.45
RFTN1-201ENST00000334133 C1QTNF2Q9BXJ5 285 aa17.85■□□□□ 0.45
RFTN1-201ENST00000334133 NTNG1Q9Y2I2 539 aa17.85■□□□□ 0.45
RFTN1-201ENST00000334133 KPNA4O00629 521 aaPredicted RBP17.84■□□□□ 0.45
RFTN1-201ENST00000334133 TLX2O43763 284 aaPredicted RBP17.84■□□□□ 0.45
RFTN1-201ENST00000334133 ADAP00813 363 aa17.84■□□□□ 0.45
RFTN1-201ENST00000334133 ASGR2P07307 311 aa17.84■□□□□ 0.45
RFTN1-201ENST00000334133 POU2F2P09086 479 aa17.84■□□□□ 0.45
RFTN1-201ENST00000334133 COL9A1P20849 921 aa17.84■□□□□ 0.45
RFTN1-201ENST00000334133 PPP2R1BP30154 601 aa17.84■□□□□ 0.45
RFTN1-201ENST00000334133 ERVK-21P61565 698 aa17.84■□□□□ 0.45
RFTN1-201ENST00000334133 OXA1LQ15070 435 aa17.84■□□□□ 0.45
RFTN1-201ENST00000334133 CASP12Q6UXS9 341 aa17.84■□□□□ 0.45
RFTN1-201ENST00000334133 ZER1Q7Z7L7 766 aa17.84■□□□□ 0.45
RFTN1-201ENST00000334133 CYP4Z2PQ8N1L4 340 aa17.84■□□□□ 0.45
RFTN1-201ENST00000334133 KCNS3Q9BQ31 491 aa17.84■□□□□ 0.45
RFTN1-201ENST00000334133 FAIM2Q9BWQ8 316 aa17.84■□□□□ 0.45
RFTN1-201ENST00000334133 GPC6Q9Y625 555 aaPredicted RBP17.84■□□□□ 0.45
RFTN1-201ENST00000334133 DNAJB6O75190 326 aa17.84■□□□□ 0.45
RFTN1-201ENST00000334133 MMP11P24347 488 aa17.84■□□□□ 0.45
RFTN1-201ENST00000334133 KIR2DL1P43626 348 aaPredicted RBP17.84■□□□□ 0.45
RFTN1-201ENST00000334133 MAP4K2Q12851 820 aa17.84■□□□□ 0.45
RFTN1-201ENST00000334133 TJAP1Q5JTD0 557 aa17.84■□□□□ 0.45
RFTN1-201ENST00000334133 PLAG1Q6DJT9 500 aa17.84■□□□□ 0.45
RFTN1-201ENST00000334133 ENPP7Q6UWV6 458 aa17.84■□□□□ 0.45
RFTN1-201ENST00000334133 SLC22A16Q86VW1 577 aa17.84■□□□□ 0.45
RFTN1-201ENST00000334133 TMEFF1Q8IYR6 380 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms