RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 VIPR1P32241 457 aa22.35■■□□□ 1.17
TSKU-201ENST00000333090 EPHB3P54753 998 aa22.35■■□□□ 1.17
TSKU-201ENST00000333090 RAB25P57735 213 aa22.35■■□□□ 1.17
TSKU-201ENST00000333090 TMEM115Q12893 351 aaPredicted RBP22.35■■□□□ 1.17
TSKU-201ENST00000333090 ZNF284Q2VY69 593 aa22.35■■□□□ 1.17
TSKU-201ENST00000333090 KLHL22Q53GT1 634 aa22.35■■□□□ 1.17
TSKU-201ENST00000333090 MEX3DQ86XN8 651 aaKnown RBP22.35■■□□□ 1.17
TSKU-201ENST00000333090 TMC8Q8IU68 726 aa22.35■■□□□ 1.17
TSKU-201ENST00000333090 TRAM1L1Q8N609 369 aa22.35■■□□□ 1.17
TSKU-201ENST00000333090 RNFT2Q96EX2 444 aa22.35■■□□□ 1.17
TSKU-201ENST00000333090 CTPS2Q9NRF8 586 aa22.35■■□□□ 1.17
TSKU-201ENST00000333090 TEKT2Q9UIF3 430 aa22.35■■□□□ 1.17
TSKU-201ENST00000333090 LOC102723532A0A0G2JNH3 316 aa22.34■■□□□ 1.17
TSKU-201ENST00000333090 CTSAP10619 480 aa22.34■■□□□ 1.17
TSKU-201ENST00000333090 INPP1P49441 399 aa22.34■■□□□ 1.17
TSKU-201ENST00000333090 PRLHRP49683 370 aa22.34■■□□□ 1.17
TSKU-201ENST00000333090 TPBGQ13641 420 aa22.34■■□□□ 1.17
TSKU-201ENST00000333090 CCDC85BQ15834 202 aaPredicted RBP22.34■■□□□ 1.17
TSKU-201ENST00000333090 POM121L1PQ3SYA9 428 aa22.34■■□□□ 1.17
TSKU-201ENST00000333090 TPGS2Q68CL5 300 aa22.34■■□□□ 1.17
TSKU-201ENST00000333090 SZRD1Q7Z422 152 aa22.34■■□□□ 1.17
TSKU-201ENST00000333090 IQCHQ86VS3 1027 aa22.34■■□□□ 1.17
TSKU-201ENST00000333090 OR4M1Q8NGD0 313 aa22.34■■□□□ 1.17
TSKU-201ENST00000333090 OR4K5Q8NGD3 323 aa22.34■■□□□ 1.17
TSKU-201ENST00000333090 SLC5A11Q8WWX8 675 aa22.34■■□□□ 1.17
TSKU-201ENST00000333090 SLC9A6Q92581 669 aa22.34■■□□□ 1.17
TSKU-201ENST00000333090 GPA33Q99795 319 aa22.34■■□□□ 1.17
TSKU-201ENST00000333090 ZSCAN5AQ9BUG6 496 aa22.34■■□□□ 1.17
TSKU-201ENST00000333090 IL21Q9HBE4 155 aa22.34■■□□□ 1.17
TSKU-201ENST00000333090 STMN3Q9NZ72 180 aa22.34■■□□□ 1.17
TSKU-201ENST00000333090 A4GNTQ9UNA3 340 aa22.34■■□□□ 1.17
TSKU-201ENST00000333090 ZSCAN5BA6NJL1 495 aa22.34■■□□□ 1.17
TSKU-201ENST00000333090 TRIM3O75382 744 aaPredicted RBP22.34■■□□□ 1.17
TSKU-201ENST00000333090 HLA-DQB1P01920 261 aa22.34■■□□□ 1.17
TSKU-201ENST00000333090 CYP2A6P11509 494 aaPredicted RBP22.34■■□□□ 1.17
TSKU-201ENST00000333090 CD79BP40259 229 aa22.34■■□□□ 1.17
TSKU-201ENST00000333090 SMIM11AP58511 58 aa22.34■■□□□ 1.17
TSKU-201ENST00000333090 C6orf120Q7Z4R8 191 aa22.34■■□□□ 1.17
TSKU-201ENST00000333090 HMGN2P46Q86SG4 172 aa22.34■■□□□ 1.17
TSKU-201ENST00000333090 DUSP18Q8NEJ0 188 aa22.34■■□□□ 1.17
TSKU-201ENST00000333090 ZC3HAV1LQ96H79 300 aaKnown RBP22.34■■□□□ 1.17
TSKU-201ENST00000333090 FBXW2Q9UKT8 454 aa22.34■■□□□ 1.17
TSKU-201ENST00000333090 ICKQ9UPZ9 632 aa22.34■■□□□ 1.17
TSKU-201ENST00000333090 RTCAO00442 366 aaKnown RBP22.33■■□□□ 1.17
TSKU-201ENST00000333090 SLC28A2O43868 658 aa22.33■■□□□ 1.17
TSKU-201ENST00000333090 GABRR2P28476 465 aa22.33■■□□□ 1.17
TSKU-201ENST00000333090 CA8P35219 290 aa22.33■■□□□ 1.17
TSKU-201ENST00000333090 AVPR1BP47901 424 aa22.33■■□□□ 1.17
TSKU-201ENST00000333090 COMTD1Q86VU5 262 aa22.33■■□□□ 1.17
TSKU-201ENST00000333090 FAM109AQ8N4B1 249 aa22.33■■□□□ 1.17
TSKU-201ENST00000333090 C2orf73Q8N5S3 287 aaPredicted RBP22.33■■□□□ 1.17
TSKU-201ENST00000333090 ANGPTL6Q8NI99 470 aa22.33■■□□□ 1.17
TSKU-201ENST00000333090 TMEM163Q8TC26 289 aa22.33■■□□□ 1.17
TSKU-201ENST00000333090 FNDC11Q9BVV2 318 aa22.33■■□□□ 1.17
TSKU-201ENST00000333090 LINC00597Q9H2U6 94 aa22.33■■□□□ 1.17
TSKU-201ENST00000333090 HMGN4O00479 90 aa22.33■■□□□ 1.16
TSKU-201ENST00000333090 HOXA2O43364 376 aa22.33■■□□□ 1.16
TSKU-201ENST00000333090 ARSBP15848 533 aa22.33■■□□□ 1.16
TSKU-201ENST00000333090 DDX5P17844 614 aaKnown RBP22.33■■□□□ 1.16
TSKU-201ENST00000333090 GABRA5P31644 462 aa22.33■■□□□ 1.16
TSKU-201ENST00000333090 SOX18P35713 384 aa22.33■■□□□ 1.16
TSKU-201ENST00000333090 NXPE4Q6UWF7 544 aa22.33■■□□□ 1.16
TSKU-201ENST00000333090 IKBIPQ70UQ0 350 aa22.33■■□□□ 1.16
TSKU-201ENST00000333090 HTR3DQ70Z44 454 aa22.33■■□□□ 1.16
TSKU-201ENST00000333090 CPXM2Q8N436 756 aa22.33■■□□□ 1.16
TSKU-201ENST00000333090 GLYATL1Q969I3 302 aa22.33■■□□□ 1.16
TSKU-201ENST00000333090 WDR34Q96EX3 536 aa22.33■■□□□ 1.16
TSKU-201ENST00000333090 IGSF21Q96ID5 467 aa22.33■■□□□ 1.16
TSKU-201ENST00000333090 QRFPRQ96P65 431 aa22.33■■□□□ 1.16
TSKU-201ENST00000333090 DCLRE1CQ96SD1 692 aaKnown RBP22.33■■□□□ 1.16
TSKU-201ENST00000333090 ZNF607Q96SK3 696 aa22.33■■□□□ 1.16
TSKU-201ENST00000333090 FUZQ9BT04 418 aa22.33■■□□□ 1.16
TSKU-201ENST00000333090 SMG9Q9H0W8 520 aaKnown RBP22.33■■□□□ 1.16
TSKU-201ENST00000333090 GALNT9Q9HCQ5 603 aa22.33■■□□□ 1.16
TSKU-201ENST00000333090 ACAD8Q9UKU7 415 aa22.33■■□□□ 1.16
TSKU-201ENST00000333090 SCN5AQ14524 2016 aa22.32■■□□□ 1.16
TSKU-201ENST00000333090 A0A1W2PQ72 361 aa22.32■■□□□ 1.16
TSKU-201ENST00000333090 ISM1B1AKI9 464 aa22.32■■□□□ 1.16
TSKU-201ENST00000333090 B4GALT2O60909 372 aa22.32■■□□□ 1.16
TSKU-201ENST00000333090 OR12D1P0DN82 309 aa22.32■■□□□ 1.16
TSKU-201ENST00000333090 GAS1P54826 345 aa22.32■■□□□ 1.16
TSKU-201ENST00000333090 CLDN20P56880 219 aa22.32■■□□□ 1.16
TSKU-201ENST00000333090 DCDC1P59894 354 aa22.32■■□□□ 1.16
TSKU-201ENST00000333090 ALDH6A1Q02252 535 aaKnown RBP22.32■■□□□ 1.16
TSKU-201ENST00000333090 CNTN1Q12860 1018 aa22.32■■□□□ 1.16
TSKU-201ENST00000333090 BRAT1Q6PJG6 821 aa22.32■■□□□ 1.16
TSKU-201ENST00000333090 OLIG3Q7RTU3 272 aa22.32■■□□□ 1.16
TSKU-201ENST00000333090 CFAP206Q8IYR0 622 aa22.32■■□□□ 1.16
TSKU-201ENST00000333090 TREX2Q9BQ50 279 aaPredicted RBP22.32■■□□□ 1.16
TSKU-201ENST00000333090 HDHD5Q9BXW7 423 aa22.32■■□□□ 1.16
TSKU-201ENST00000333090 PLA2G12AQ9BZM1 189 aa22.32■■□□□ 1.16
TSKU-201ENST00000333090 MKRN2Q9H000 416 aaKnown RBP22.32■■□□□ 1.16
TSKU-201ENST00000333090 PCDHGB7Q9Y5F8 929 aa22.32■■□□□ 1.16
TSKU-201ENST00000333090 TMEM129A0AVI4 362 aa22.32■■□□□ 1.16
TSKU-201ENST00000333090 WASHC1A8K0Z3 465 aa22.32■■□□□ 1.16
TSKU-201ENST00000333090 FAM157BP0CG42 384 aa22.32■■□□□ 1.16
TSKU-201ENST00000333090 ACP2P11117 423 aa22.32■■□□□ 1.16
TSKU-201ENST00000333090 RRAS2P62070 204 aaPredicted RBP22.32■■□□□ 1.16
TSKU-201ENST00000333090 TAP2Q03519 686 aa22.32■■□□□ 1.16
TSKU-201ENST00000333090 SYPL1Q16563 259 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms