RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 SOX3P41225 446 aa15.18■□□□□ 0.02
C11orf88-201ENST00000332814 NCBP2P52298 156 aaKnown RBP eCLIP15.18■□□□□ 0.02
C11orf88-201ENST00000332814 MAP4K2Q12851 820 aa15.18■□□□□ 0.02
C11orf88-201ENST00000332814 EBPQ15125 230 aaKnown RBP15.18■□□□□ 0.02
C11orf88-201ENST00000332814 LTB4RQ15722 352 aa15.18■□□□□ 0.02
C11orf88-201ENST00000332814 MPEG1Q2M385 716 aa15.18■□□□□ 0.02
C11orf88-201ENST00000332814 TTMPQ5BVD1 217 aa15.18■□□□□ 0.02
C11orf88-201ENST00000332814 ZNF468Q5VIY5 522 aaPredicted RBP15.18■□□□□ 0.02
C11orf88-201ENST00000332814 CES4AQ5XG92 561 aa15.18■□□□□ 0.02
C11orf88-201ENST00000332814 FAM111BQ6SJ93 734 aa15.18■□□□□ 0.02
C11orf88-201ENST00000332814 IL20RBQ6UXL0 311 aa15.18■□□□□ 0.02
C11orf88-201ENST00000332814 GALNTL5Q7Z4T8 443 aa15.18■□□□□ 0.02
C11orf88-201ENST00000332814 R3HCC1LQ7Z5L2 792 aaKnown RBP15.18■□□□□ 0.02
C11orf88-201ENST00000332814 LIX1Q8N485 282 aa15.18■□□□□ 0.02
C11orf88-201ENST00000332814 GALNT11Q8NCW6 608 aa15.18■□□□□ 0.02
C11orf88-201ENST00000332814 OR9A2Q8NGT5 310 aa15.18■□□□□ 0.02
C11orf88-201ENST00000332814 CLHC1Q8NHS4 586 aa15.18■□□□□ 0.02
C11orf88-201ENST00000332814 ZFP28Q8NHY6 868 aa15.18■□□□□ 0.02
C11orf88-201ENST00000332814 GRHL3Q8TE85 626 aa15.18■□□□□ 0.02
C11orf88-201ENST00000332814 SCMH1Q96GD3 660 aa15.18■□□□□ 0.02
C11orf88-201ENST00000332814 FCRL1Q96LA6 429 aa15.18■□□□□ 0.02
C11orf88-201ENST00000332814 ZNF681Q96N22 645 aa15.18■□□□□ 0.02
C11orf88-201ENST00000332814 SORT1Q99523 831 aa15.18■□□□□ 0.02
C11orf88-201ENST00000332814 SH3GL2Q99962 352 aa15.18■□□□□ 0.02
C11orf88-201ENST00000332814 C1orf50Q9BV19 199 aa15.18■□□□□ 0.02
C11orf88-201ENST00000332814 C20orf27Q9GZN8 174 aa15.18■□□□□ 0.02
C11orf88-201ENST00000332814 REEP4Q9H6H4 257 aa15.18■□□□□ 0.02
C11orf88-201ENST00000332814 TRIM45Q9H8W5 580 aaPredicted RBP15.18■□□□□ 0.02
C11orf88-201ENST00000332814 RYDENQ9NUL5 291 aaKnown RBP15.18■□□□□ 0.02
C11orf88-201ENST00000332814 OLAHQ9NV23 265 aa15.18■□□□□ 0.02
C11orf88-201ENST00000332814 PRODH2Q9UF12 536 aa15.18■□□□□ 0.02
C11orf88-201ENST00000332814 GIMAP2Q9UG22 337 aa15.18■□□□□ 0.02
C11orf88-201ENST00000332814 SPTA1P02549 2419 aa15.17■□□□□ 0.02
C11orf88-201ENST00000332814 TMEM200CA6NKL6 621 aa15.17■□□□□ 0.02
C11orf88-201ENST00000332814 KLRC4-KLRK1H3BQV0 150 aa15.17■□□□□ 0.02
C11orf88-201ENST00000332814 PDPK1O15530 556 aa15.17■□□□□ 0.02
C11orf88-201ENST00000332814 NME2P1O60361 137 aa15.17■□□□□ 0.02
C11orf88-201ENST00000332814 BCAS2O75934 225 aaPredicted RBP15.17■□□□□ 0.02
C11orf88-201ENST00000332814 SLITRK5O94991 958 aa15.17■□□□□ 0.02
C11orf88-201ENST00000332814 OR6B1O95007 311 aa15.17■□□□□ 0.02
C11orf88-201ENST00000332814 JUNP05412 331 aaKnown RBP15.17■□□□□ 0.02
C11orf88-201ENST00000332814 PRPS2P11908 318 aa15.17■□□□□ 0.02
C11orf88-201ENST00000332814 BCKDHAP12694 445 aa15.17■□□□□ 0.02
C11orf88-201ENST00000332814 NME2P22392 152 aa15.17■□□□□ 0.02
C11orf88-201ENST00000332814 NRG3P56975 720 aa15.17■□□□□ 0.02
C11orf88-201ENST00000332814 MRPS35P82673 323 aaKnown RBP15.17■□□□□ 0.02
C11orf88-201ENST00000332814 DUSP2Q05923 314 aa15.17■□□□□ 0.02
C11orf88-201ENST00000332814 EXOSC7Q15024 291 aaKnown RBP15.17■□□□□ 0.02
C11orf88-201ENST00000332814 C6orf136Q5SQH8 315 aa15.17■□□□□ 0.02
C11orf88-201ENST00000332814 RTL4Q6ZR62 310 aa15.17■□□□□ 0.02
C11orf88-201ENST00000332814 SLC15A4Q8N697 577 aa15.17■□□□□ 0.02
C11orf88-201ENST00000332814 OR52R1Q8NGF1 315 aa15.17■□□□□ 0.02
C11orf88-201ENST00000332814 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.17■□□□□ 0.02
C11orf88-201ENST00000332814 ZNF675Q8TD23 568 aa15.17■□□□□ 0.02
C11orf88-201ENST00000332814 ERP27Q96DN0 273 aa15.17■□□□□ 0.02
C11orf88-201ENST00000332814 EGLN2Q96KS0 407 aa15.17■□□□□ 0.02
C11orf88-201ENST00000332814 C3orf30Q96M34 536 aa15.17■□□□□ 0.02
C11orf88-201ENST00000332814 HES7Q9BYE0 225 aa15.17■□□□□ 0.02
C11orf88-201ENST00000332814 NUF2Q9BZD4 464 aa15.17■□□□□ 0.02
C11orf88-201ENST00000332814 TAS2R7Q9NYW3 318 aa15.17■□□□□ 0.02
C11orf88-201ENST00000332814 NOP53Q9NZM5 478 aaKnown RBP15.17■□□□□ 0.02
C11orf88-201ENST00000332814 SH3BP4Q9P0V3 963 aa15.17■□□□□ 0.02
C11orf88-201ENST00000332814 BAIAP2L1Q9UHR4 511 aa15.17■□□□□ 0.02
C11orf88-201ENST00000332814 UQCRHLA0A096LP55 91 aa15.16■□□□□ 0.02
C11orf88-201ENST00000332814 TRPC5OSA6NMA1 111 aa15.16■□□□□ 0.02
C11orf88-201ENST00000332814 CAPN14A8MX76 684 aa15.16■□□□□ 0.02
C11orf88-201ENST00000332814 SLCO1B7G3V0H7 640 aa15.16■□□□□ 0.02
C11orf88-201ENST00000332814 CLPSP04118 112 aa15.16■□□□□ 0.02
C11orf88-201ENST00000332814 PCSK2P16519 638 aa15.16■□□□□ 0.02
C11orf88-201ENST00000332814 GPC1P35052 558 aa15.16■□□□□ 0.02
C11orf88-201ENST00000332814 TMED10P49755 219 aaKnown RBP15.16■□□□□ 0.02
C11orf88-201ENST00000332814 NR0B1P51843 470 aaKnown RBP15.16■□□□□ 0.02
C11orf88-201ENST00000332814 KCNC4Q03721 635 aa15.16■□□□□ 0.02
C11orf88-201ENST00000332814 SMU1Q2TAY7 513 aa15.16■□□□□ 0.02
C11orf88-201ENST00000332814 ZNF628Q5EBL2 1059 aa15.16■□□□□ 0.02
C11orf88-201ENST00000332814 PIGGQ5H8A4 983 aa15.16■□□□□ 0.02
C11orf88-201ENST00000332814 IL23RQ5VWK5 629 aa15.16■□□□□ 0.02
C11orf88-201ENST00000332814 DND1Q8IYX4 353 aaKnown RBP15.16■□□□□ 0.02
C11orf88-201ENST00000332814 ZNF615Q8N8J6 731 aa15.16■□□□□ 0.02
C11orf88-201ENST00000332814 DNAJB8Q8NHS0 232 aa15.16■□□□□ 0.02
C11orf88-201ENST00000332814 C16orf52Q8NHV5 167 aa15.16■□□□□ 0.02
C11orf88-201ENST00000332814 LRRC8CQ8TDW0 803 aa15.16■□□□□ 0.02
C11orf88-201ENST00000332814 FAR1Q8WVX9 515 aa15.16■□□□□ 0.02
C11orf88-201ENST00000332814 KAT2AQ92830 837 aa15.16■□□□□ 0.02
C11orf88-201ENST00000332814 TP53INP1Q96A56 240 aa15.16■□□□□ 0.02
C11orf88-201ENST00000332814 MTERF3Q96E29 417 aa15.16■□□□□ 0.02
C11orf88-201ENST00000332814 PNPOQ9NVS9 261 aa15.16■□□□□ 0.02
C11orf88-201ENST00000332814 MARCOQ9UEW3 520 aaPredicted RBP15.16■□□□□ 0.02
C11orf88-201ENST00000332814 HAO1Q9UJM8 370 aa15.16■□□□□ 0.02
C11orf88-201ENST00000332814 NTNG1Q9Y2I2 539 aa15.16■□□□□ 0.02
C11orf88-201ENST00000332814 MYO1GB0I1T2 1018 aa15.15■□□□□ 0.02
C11orf88-201ENST00000332814 COQ9O75208 318 aa15.15■□□□□ 0.02
C11orf88-201ENST00000332814 P04436 131 aa15.15■□□□□ 0.02
C11orf88-201ENST00000332814 KITP10721 976 aa15.15■□□□□ 0.02
C11orf88-201ENST00000332814 GPX3P22352 226 aa15.15■□□□□ 0.02
C11orf88-201ENST00000332814 PPP2R2AP63151 447 aa15.15■□□□□ 0.02
C11orf88-201ENST00000332814 PMP22Q01453 160 aa15.15■□□□□ 0.02
C11orf88-201ENST00000332814 CEBPEQ15744 281 aa15.15■□□□□ 0.02
C11orf88-201ENST00000332814 TRMT12Q53H54 448 aaKnown RBP15.15■□□□□ 0.02
C11orf88-201ENST00000332814 ANKRD26P1Q6NSI1 321 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms