RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 CCDC116Q8IYX3 515 aa13.74□□□□□ -0.21
TPM3-206ENST00000330188 MCFD2Q8NI22 146 aa13.74□□□□□ -0.21
TPM3-206ENST00000330188 JPH3Q8WXH2 748 aaPredicted RBP13.74□□□□□ -0.21
TPM3-206ENST00000330188 DACH2Q96NX9 599 aa13.74□□□□□ -0.21
TPM3-206ENST00000330188 OR5M11Q96RB7 305 aa13.74□□□□□ -0.21
TPM3-206ENST00000330188 IL4I1Q96RQ9 567 aa13.74□□□□□ -0.21
TPM3-206ENST00000330188 C1QTNF7Q9BXJ2 289 aa13.74□□□□□ -0.21
TPM3-206ENST00000330188 OR51E2Q9H255 320 aa13.74□□□□□ -0.21
TPM3-206ENST00000330188 FGF22Q9HCT0 170 aa13.74□□□□□ -0.21
TPM3-206ENST00000330188 APOBEC3BQ9UH17 382 aaKnown RBP13.74□□□□□ -0.21
TPM3-206ENST00000330188 DAPK2Q9UIK4 370 aa13.74□□□□□ -0.21
TPM3-206ENST00000330188 FBXW2Q9UKT8 454 aa13.74□□□□□ -0.21
TPM3-206ENST00000330188 KLHL20Q9Y2M5 609 aa13.74□□□□□ -0.21
TPM3-206ENST00000330188 IFT52Q9Y366 437 aa13.74□□□□□ -0.21
TPM3-206ENST00000330188 PCDHGA4Q9Y5G9 962 aa13.74□□□□□ -0.21
TPM3-206ENST00000330188 A0A1W2PS29 197 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 GUCY1B2O75343 617 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 UGT2B17O75795 530 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 SLITRK5O94991 958 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 DNTTP04053 509 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 TP53P04637 393 aaPredicted RBP13.73□□□□□ -0.21
TPM3-206ENST00000330188 HMGN2P05204 90 aaKnown RBP13.73□□□□□ -0.21
TPM3-206ENST00000330188 CMPK1P30085 196 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 BCAP31P51572 246 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 XKP51811 444 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 ARFIP1P53367 373 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 OLR1P78380 273 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 LASP1Q14847 261 aaKnown RBP13.73□□□□□ -0.21
TPM3-206ENST00000330188 TMEM196Q5HYL7 178 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 TMEM201Q5SNT2 666 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 PERM1Q5SV97 790 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 C18orf63Q68DL7 685 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 PLAG1Q6DJT9 500 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 ZNF425Q6IV72 752 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 HMGN2P46Q86SG4 172 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 MFSD9Q8NBP5 474 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 TRMT61BQ9BVS5 477 aaKnown RBP13.73□□□□□ -0.21
TPM3-206ENST00000330188 POLR2J3Q9H1A7 115 aaKnown RBP13.73□□□□□ -0.21
TPM3-206ENST00000330188 RNF167Q9H6Y7 350 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 KIR3DX1Q9H7L2 352 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 TBC1D3DA0A087WVF3 549 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 TBC1D3IA0A087WXS9 549 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 TBC1D3EA0A087X179 549 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 TBC1D3KA0A087X1G2 549 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 A0A1W2PRQ8 180 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 TBC1D3FA6NER0 549 aaPredicted RBP13.73□□□□□ -0.21
TPM3-206ENST00000330188 TBC1D3LB9A6J9 549 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 SLC31A1O15431 190 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 TBC1D3HP0C7X1 549 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 HSMCR30P0CW71 290 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 C8orf89P0DMQ9 161 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 F3P13726 295 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 NTSR1P30989 418 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 LBX1P52954 281 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 RAB8AP61006 207 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 PPP2CBP62714 309 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 PPP2CAP67775 309 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 TARDBPQ13148 414 aaKnown RBP eCLIP13.73□□□□□ -0.21
TPM3-206ENST00000330188 DOC2BQ14184 412 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 ZNF404Q494X3 552 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 SOWAHCQ53LP3 525 aaPredicted RBP13.73□□□□□ -0.21
TPM3-206ENST00000330188 TBC1D3GQ6DHY5 549 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 TBC1D3CQ6IPX1 549 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 ANKRD54Q6NXT1 300 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 SLC48A1Q6P1K1 146 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 PODNL1Q6PEZ8 512 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 TMEM107Q6UX40 140 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 WDR53Q7Z5U6 358 aaPredicted RBP13.73□□□□□ -0.21
TPM3-206ENST00000330188 TBC1D3Q8IZP1 549 aaPredicted RBP13.73□□□□□ -0.21
TPM3-206ENST00000330188 ENTPD4Q9Y227 616 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 HEBP2Q9Y5Z4 205 aa13.73□□□□□ -0.21
TPM3-206ENST00000330188 LOC100506127A0A0U1RQW1 187 aa13.72□□□□□ -0.21
TPM3-206ENST00000330188 PRSS38A1L453 326 aa13.72□□□□□ -0.21
TPM3-206ENST00000330188 H3BN98 237 aa13.72□□□□□ -0.21
TPM3-206ENST00000330188 DSCR3O14972 297 aa13.72□□□□□ -0.21
TPM3-206ENST00000330188 LGI1O95970 557 aa13.72□□□□□ -0.21
TPM3-206ENST00000330188 LAMP2P13473 410 aa13.72□□□□□ -0.21
TPM3-206ENST00000330188 COL9A1P20849 921 aa13.72□□□□□ -0.21
TPM3-206ENST00000330188 TRIM16LQ309B1 348 aa13.72□□□□□ -0.21
TPM3-206ENST00000330188 BHLHB9Q6PI77 547 aa13.72□□□□□ -0.21
TPM3-206ENST00000330188 C19orf48Q6RUI8 117 aa13.72□□□□□ -0.21
TPM3-206ENST00000330188 OR56A1Q8NGH5 318 aa13.72□□□□□ -0.21
TPM3-206ENST00000330188 OR6T1Q8NGN1 323 aa13.72□□□□□ -0.21
TPM3-206ENST00000330188 C16orf58Q96GQ5 468 aa13.72□□□□□ -0.21
TPM3-206ENST00000330188 OR2M4Q96R27 311 aa13.72□□□□□ -0.21
TPM3-206ENST00000330188 GABRG3Q99928 467 aa13.72□□□□□ -0.21
TPM3-206ENST00000330188 SPATA5L1Q9BVQ7 753 aa13.72□□□□□ -0.21
TPM3-206ENST00000330188 ROGDIQ9GZN7 287 aa13.72□□□□□ -0.21
TPM3-206ENST00000330188 MMP27Q9H306 513 aa13.72□□□□□ -0.21
TPM3-206ENST00000330188 MAN2C1Q9NTJ4 1040 aa13.72□□□□□ -0.21
TPM3-206ENST00000330188 DNAJC27Q9NZQ0 273 aa13.72□□□□□ -0.21
TPM3-206ENST00000330188 SLC9A8Q9Y2E8 581 aa13.72□□□□□ -0.21
TPM3-206ENST00000330188 KLK4Q9Y5K2 254 aa13.72□□□□□ -0.21
TPM3-206ENST00000330188 ISM1B1AKI9 464 aa13.72□□□□□ -0.21
TPM3-206ENST00000330188 NME6O75414 186 aaPredicted RBP13.72□□□□□ -0.21
TPM3-206ENST00000330188 EML2O95834 649 aa13.72□□□□□ -0.21
TPM3-206ENST00000330188 FHP07954 510 aa13.72□□□□□ -0.21
TPM3-206ENST00000330188 DBTP11182 482 aaKnown RBP13.72□□□□□ -0.21
TPM3-206ENST00000330188 CSNK2A2P19784 350 aaPredicted RBP13.72□□□□□ -0.21
TPM3-206ENST00000330188 TSFMP43897 325 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms