RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 TCTE1Q5JU00 501 aa7.96□□□□□ -1.13
SKA2-201ENST00000330137 NBPF12Q5TAG4 269 aaPredicted RBP7.96□□□□□ -1.13
SKA2-201ENST00000330137 ZC3H14Q6PJT7 736 aaKnown RBP7.96□□□□□ -1.13
SKA2-201ENST00000330137 TPRA1Q86W33 373 aa7.96□□□□□ -1.13
SKA2-201ENST00000330137 ANKRD46Q86W74 232 aa7.96□□□□□ -1.13
SKA2-201ENST00000330137 FAM217AQ8IXS0 508 aa7.96□□□□□ -1.13
SKA2-201ENST00000330137 LRRC56Q8IYG6 542 aaPredicted RBP7.96□□□□□ -1.13
SKA2-201ENST00000330137 GPR65Q8IYL9 337 aa7.96□□□□□ -1.13
SKA2-201ENST00000330137 RNF113BQ8IZP6 322 aaKnown RBP7.96□□□□□ -1.13
SKA2-201ENST00000330137 GPR26Q8NDV2 337 aa7.96□□□□□ -1.13
SKA2-201ENST00000330137 OR5M9Q8NGP3 310 aa7.96□□□□□ -1.13
SKA2-201ENST00000330137 NXPE3Q969Y0 559 aa7.96□□□□□ -1.13
SKA2-201ENST00000330137 SGK3Q96BR1 496 aa7.96□□□□□ -1.13
SKA2-201ENST00000330137 MRPS24Q96EL2 167 aaKnown RBP7.96□□□□□ -1.13
SKA2-201ENST00000330137 ASIC4Q96FT7 647 aa7.96□□□□□ -1.13
SKA2-201ENST00000330137 SLC6A18Q96N87 628 aa7.96□□□□□ -1.13
SKA2-201ENST00000330137 OR2A7Q96R45 310 aa7.96□□□□□ -1.13
SKA2-201ENST00000330137 HBEGFQ99075 208 aa7.96□□□□□ -1.13
SKA2-201ENST00000330137 NMNAT1Q9HAN9 279 aaPredicted RBP7.96□□□□□ -1.13
SKA2-201ENST00000330137 NMUR1Q9HB89 426 aa7.96□□□□□ -1.13
SKA2-201ENST00000330137 MED11Q9P086 117 aa7.96□□□□□ -1.13
SKA2-201ENST00000330137 AKAP7Q9P0M2 348 aaPredicted RBP7.96□□□□□ -1.13
SKA2-201ENST00000330137 KLHL42Q9P2K6 505 aa7.96□□□□□ -1.13
SKA2-201ENST00000330137 TINAGQ9UJW2 476 aa7.96□□□□□ -1.13
SKA2-201ENST00000330137 MAFFQ9ULX9 164 aa7.96□□□□□ -1.13
SKA2-201ENST00000330137 AKT3Q9Y243 479 aa7.96□□□□□ -1.13
SKA2-201ENST00000330137 IGLV3-10A0A075B6K4 115 aa7.96□□□□□ -1.14
SKA2-201ENST00000330137 A0A1B0GTQ1 180 aa7.96□□□□□ -1.14
SKA2-201ENST00000330137 MCRIP1C9JLW8 97 aa7.96□□□□□ -1.14
SKA2-201ENST00000330137 NEDD8-MDP1E9PL57 170 aa7.96□□□□□ -1.14
SKA2-201ENST00000330137 NBNO60934 754 aa7.96□□□□□ -1.14
SKA2-201ENST00000330137 GCM2O75603 506 aaPredicted RBP7.96□□□□□ -1.14
SKA2-201ENST00000330137 HPP00738 406 aa7.96□□□□□ -1.14
SKA2-201ENST00000330137 GASTP01350 101 aa7.96□□□□□ -1.14
SKA2-201ENST00000330137 ELK1P19419 428 aa7.96□□□□□ -1.14
SKA2-201ENST00000330137 DGKAP23743 735 aa7.96□□□□□ -1.14
SKA2-201ENST00000330137 AVPR1BP47901 424 aa7.96□□□□□ -1.14
SKA2-201ENST00000330137 CTBP2P56545 445 aa7.96□□□□□ -1.14
SKA2-201ENST00000330137 EFNB1P98172 346 aa7.96□□□□□ -1.14
SKA2-201ENST00000330137 CRYZQ08257 329 aaKnown RBP7.96□□□□□ -1.14
SKA2-201ENST00000330137 STX4Q12846 297 aa7.96□□□□□ -1.14
SKA2-201ENST00000330137 GPR17Q13304 367 aa7.96□□□□□ -1.14
SKA2-201ENST00000330137 SERINC3Q13530 473 aa7.96□□□□□ -1.14
SKA2-201ENST00000330137 GRM7Q14831 915 aa7.96□□□□□ -1.14
SKA2-201ENST00000330137 UBXN2BQ14CS0 331 aa7.96□□□□□ -1.14
SKA2-201ENST00000330137 ST3GAL2Q16842 350 aa7.96□□□□□ -1.14
SKA2-201ENST00000330137 ZNF630Q2M218 657 aaPredicted RBP7.96□□□□□ -1.14
SKA2-201ENST00000330137 ELFN2Q5R3F8 820 aa7.96□□□□□ -1.14
SKA2-201ENST00000330137 ATAT1Q5SQI0 421 aa7.96□□□□□ -1.14
SKA2-201ENST00000330137 ARMC12Q5T9G4 340 aa7.96□□□□□ -1.14
SKA2-201ENST00000330137 TMEM91Q6ZNR0 172 aa7.96□□□□□ -1.14
SKA2-201ENST00000330137 LRRC70Q7Z2Q7 622 aa7.96□□□□□ -1.14
SKA2-201ENST00000330137 LILRB2Q8N423 598 aa7.96□□□□□ -1.14
SKA2-201ENST00000330137 ZNF454Q8N9F8 522 aa7.96□□□□□ -1.14
SKA2-201ENST00000330137 L3MBTL4Q8NA19 623 aa7.96□□□□□ -1.14
SKA2-201ENST00000330137 FAM98AQ8NCA5 519 aaKnown RBP7.96□□□□□ -1.14
SKA2-201ENST00000330137 ZNF485Q8NCK3 441 aa7.96□□□□□ -1.14
SKA2-201ENST00000330137 OR9Q2Q8NGE9 314 aa7.96□□□□□ -1.14
SKA2-201ENST00000330137 NEIL3Q8TAT5 605 aa7.96□□□□□ -1.14
SKA2-201ENST00000330137 ST8SIA2Q92186 375 aa7.96□□□□□ -1.14
SKA2-201ENST00000330137 SEC22CQ9BRL7 303 aa7.96□□□□□ -1.14
SKA2-201ENST00000330137 SARGQ9BW04 601 aa7.96□□□□□ -1.14
SKA2-201ENST00000330137 CINPQ9BW66 212 aaPredicted RBP7.96□□□□□ -1.14
SKA2-201ENST00000330137 IFT27Q9BW83 186 aa7.96□□□□□ -1.14
SKA2-201ENST00000330137 CACNG6Q9BXT2 260 aa7.96□□□□□ -1.14
SKA2-201ENST00000330137 DCAF16Q9NXF7 216 aa7.96□□□□□ -1.14
SKA2-201ENST00000330137 PPIEQ9UNP9 301 aaKnown RBP7.96□□□□□ -1.14
SKA2-201ENST00000330137 SMIM28A0A1B0GU29 152 aa7.95□□□□□ -1.14
SKA2-201ENST00000330137 HNRNPCL2B2RXH8 293 aa7.95□□□□□ -1.14
SKA2-201ENST00000330137 LOC730098B7Z3J9 87 aa7.95□□□□□ -1.14
SKA2-201ENST00000330137 SSNA1O43805 119 aa7.95□□□□□ -1.14
SKA2-201ENST00000330137 GALR3O60755 368 aaPredicted RBP7.95□□□□□ -1.14
SKA2-201ENST00000330137 TMEM127O75204 238 aa7.95□□□□□ -1.14
SKA2-201ENST00000330137 NIPSNAP2O75323 286 aa7.95□□□□□ -1.14
SKA2-201ENST00000330137 EGFP01133 1207 aa7.95□□□□□ -1.14
SKA2-201ENST00000330137 LPOP22079 712 aaPredicted RBP7.95□□□□□ -1.14
SKA2-201ENST00000330137 RFC3P40938 356 aa7.95□□□□□ -1.14
SKA2-201ENST00000330137 MECP2P51608 486 aaKnown RBP7.95□□□□□ -1.14
SKA2-201ENST00000330137 RPL6Q02878 288 aaKnown RBP7.95□□□□□ -1.14
SKA2-201ENST00000330137 LRRC32Q14392 662 aa7.95□□□□□ -1.14
SKA2-201ENST00000330137 GK2Q14410 553 aaPredicted RBP7.95□□□□□ -1.14
SKA2-201ENST00000330137 KRT33BQ14525 404 aa7.95□□□□□ -1.14
SKA2-201ENST00000330137 IHHQ14623 411 aa7.95□□□□□ -1.14
SKA2-201ENST00000330137 TRAM1Q15629 374 aa7.95□□□□□ -1.14
SKA2-201ENST00000330137 GPR68Q15743 365 aa7.95□□□□□ -1.14
SKA2-201ENST00000330137 UGT8Q16880 541 aa7.95□□□□□ -1.14
SKA2-201ENST00000330137 XKR6Q5GH73 641 aa7.95□□□□□ -1.14
SKA2-201ENST00000330137 LIN54Q6MZP7 749 aa7.95□□□□□ -1.14
SKA2-201ENST00000330137 KIAA1161Q6NSJ0 714 aa7.95□□□□□ -1.14
SKA2-201ENST00000330137 RGMBQ6NW40 437 aa7.95□□□□□ -1.14
SKA2-201ENST00000330137 KANSL1Q7Z3B3 1105 aa7.95□□□□□ -1.14
SKA2-201ENST00000330137 SKA3Q8IX90 412 aa7.95□□□□□ -1.14
SKA2-201ENST00000330137 OR6V1Q8N148 313 aa7.95□□□□□ -1.14
SKA2-201ENST00000330137 TOMM5Q8N4H5 51 aa7.95□□□□□ -1.14
SKA2-201ENST00000330137 EID2Q8N6I1 236 aa7.95□□□□□ -1.14
SKA2-201ENST00000330137 PNPLA1Q8N8W4 532 aa7.95□□□□□ -1.14
SKA2-201ENST00000330137 OR1S1Q8NH92 325 aa7.95□□□□□ -1.14
SKA2-201ENST00000330137 SP7Q8TDD2 431 aaPredicted RBP7.95□□□□□ -1.14
SKA2-201ENST00000330137 ELP5Q8TE02 316 aa7.95□□□□□ -1.14
SKA2-201ENST00000330137 FGF11Q92914 225 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms