RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 DUSP28Q4G0W2 176 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 ARHGAP15Q53QZ3 475 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 ASPGQ86U10 573 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 NAA40Q86UY6 237 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 CLDN22Q8N7P3 220 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 AVL9Q8NBF6 648 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 MDGA1Q8NFP4 955 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 OR9Q1Q8NGQ5 310 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 C9orf43Q8TAL5 461 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-201ENST00000328923 WNT2BQ93097 391 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 TMEM203Q969S6 136 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 CPNE4Q96A23 557 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-201ENST00000328923 ART5Q96L15 291 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 C7orf50Q9BRJ6 194 aaKnown RBP11.26□□□□□ -0.61
SHMT2-201ENST00000328923 FDXACB1Q9BRP7 624 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-201ENST00000328923 C1QTNF3Q9BXJ4 246 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 CDCA4Q9BXL8 241 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 SIK2Q9H0K1 926 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 MFSD1Q9H3U5 465 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 BEX1Q9HBH7 125 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 SH3BP4Q9P0V3 963 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 AKT3Q9Y243 479 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 PDCD11Q14690 1871 aaKnown RBP11.26□□□□□ -0.61
SHMT2-201ENST00000328923 C9orf170A2RU37 121 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 RHPN2P1A8MT19 583 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 HPP00738 406 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 IL1AP01583 271 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 WARSP23381 471 aaKnown RBP11.26□□□□□ -0.61
SHMT2-201ENST00000328923 GKP32189 559 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 AVPR1BP47901 424 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 NRG1Q02297 640 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-201ENST00000328923 HLXQ14774 488 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-201ENST00000328923 INO80DQ53TQ3 878 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-201ENST00000328923 ATPAF2Q8N5M1 289 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 PNPLA1Q8N8W4 532 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 SYT14Q8NB59 555 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 OR10H5Q8NGA6 315 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 NDRG1Q92597 394 aaKnown RBP11.26□□□□□ -0.61
SHMT2-201ENST00000328923 ATOH8Q96SQ7 321 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 JAM3Q9BX67 310 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 GSDMCQ9BYG8 508 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 ABCG5Q9H222 651 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 C11orf16Q9NQ32 467 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 HEBP1Q9NRV9 189 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 TXNL4BQ9NX01 149 aaKnown RBP11.26□□□□□ -0.61
SHMT2-201ENST00000328923 NLGN3Q9NZ94 848 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 OR6C2Q9NZP2 312 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 CLEC2DQ9UHP7 191 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 CLEC4AQ9UMR7 237 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 GABRDO14764 452 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 SCAMP2O15127 329 aaKnown RBP11.25□□□□□ -0.61
SHMT2-201ENST00000328923 ADAMDEC1O15204 470 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 CASC3O15234 703 aaKnown RBP11.25□□□□□ -0.61
SHMT2-201ENST00000328923 LILRB5O75023 590 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 CRCPO75575 148 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 APBB3O95704 486 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 MMP3P08254 477 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 UROSP10746 265 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 C4BPBP20851 252 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 MST1P26927 711 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 GCGRP47871 477 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 PPP3R1P63098 170 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 SKP2Q13309 424 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 LIPKQ5VXJ0 399 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 FAHD1Q6P587 224 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 GDPGP1Q6ZNW5 385 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 C10orf111Q8N326 155 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 LIX1Q8N485 282 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 OR2T11Q8NH01 316 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 SVIPQ8NHG7 77 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 STK35Q8TDR2 534 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 HSD17B8Q92506 261 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 MS4A4EQ96PG1 132 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 NELL2Q99435 816 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 TCEAL7Q9BRU2 100 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 CHST2Q9Y4C5 530 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 ANKRD36A6QL64 1941 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 COL4A4P53420 1690 aaPredicted RBP11.25□□□□□ -0.61
SHMT2-201ENST00000328923 MATN3O15232 486 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 HCRTO43612 131 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 KERAO60938 352 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 S1PR4O95977 384 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 FABP9Q0Z7S8 132 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 MPPE1Q53F39 396 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 FBXO48Q5FWF7 155 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 MARCH8Q5T0T0 291 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 GCNT6Q5T4J0 391 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 C9orf57Q5W0N0 161 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 DHRS7BQ6IAN0 325 aaPredicted RBP11.25□□□□□ -0.61
SHMT2-201ENST00000328923 ZCCHC12Q6PEW1 402 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 RELL2Q8NC24 303 aaPredicted RBP11.25□□□□□ -0.61
SHMT2-201ENST00000328923 KATNB1Q9BVA0 655 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 COLEC11Q9BWP8 271 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 ATP13A1Q9HD20 1204 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 OR12D3Q9UGF7 316 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 PLEKHM1Q9Y4G2 1056 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 BACE2Q9Y5Z0 518 aa11.25□□□□□ -0.61
SHMT2-201ENST00000328923 TNRC18O15417 2968 aaPredicted RBP11.24□□□□□ -0.61
SHMT2-201ENST00000328923 PDE4DIPQ5VU43 2346 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 PLSCR5A0PG75 271 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms