RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 A0A096LPI6 279 aa14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 UPK1AO00322 258 aa14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 IL10P22301 178 aa14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 ST13P50502 369 aaKnown RBP14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 ERFP50548 548 aa14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 MNAT1P51948 309 aa14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 PSME3P61289 254 aa14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 IL10RAQ13651 578 aa14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 LASP1Q14847 261 aaKnown RBP14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 ZNF628Q5EBL2 1059 aa14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 COX20Q5RI15 118 aa14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 ATP1A1-AS1Q5TC04 95 aa14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 TNFAIP8L2Q6P589 184 aaPredicted RBP14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 GALNT10Q86SR1 603 aa14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 RNF130Q86XS8 419 aa14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 DPP10Q8N608 796 aa14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 OR5D16Q8NGK9 328 aa14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 PTPMT1Q8WUK0 201 aaPredicted RBP14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 CCDC124Q96CT7 223 aaKnown RBP14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 ELP4Q96EB1 424 aa14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 THTPAQ9BU02 230 aa14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 WDR54Q9H977 334 aa14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 GPN2Q9H9Y4 310 aaPredicted RBP14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 CXorf21Q9HAI6 301 aa14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 TPT1P8Q9HAU6 139 aa14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 TMEM45AQ9NWC5 275 aa14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 GID8Q9NWU2 228 aa14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 MAN2B2Q9Y2E5 1009 aa14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 NCOR2Q9Y618 2525 aa14.37□□□□□ -0.11
PDLIM5-202ENST00000318007 CLIC1O00299 241 aa14.37□□□□□ -0.11
PDLIM5-202ENST00000318007 SLC6A2P23975 617 aa14.37□□□□□ -0.11
PDLIM5-202ENST00000318007 CRATP43155 626 aa14.37□□□□□ -0.11
PDLIM5-202ENST00000318007 SERTAD2Q14140 314 aa14.37□□□□□ -0.11
PDLIM5-202ENST00000318007 C6orf163Q5TEZ5 329 aa14.37□□□□□ -0.11
PDLIM5-202ENST00000318007 SAMD14Q8IZD0 417 aaPredicted RBP14.37□□□□□ -0.11
PDLIM5-202ENST00000318007 TRIML2Q8N7C3 387 aa14.37□□□□□ -0.11
PDLIM5-202ENST00000318007 OR52R1Q8NGF1 315 aa14.37□□□□□ -0.11
PDLIM5-202ENST00000318007 THAP3Q8WTV1 239 aaPredicted RBP14.37□□□□□ -0.11
PDLIM5-202ENST00000318007 C16orf58Q96GQ5 468 aa14.37□□□□□ -0.11
PDLIM5-202ENST00000318007 ZNF764Q96H86 408 aaPredicted RBP14.37□□□□□ -0.11
PDLIM5-202ENST00000318007 CDRT15Q96T59 188 aa14.37□□□□□ -0.11
PDLIM5-202ENST00000318007 BTBD10Q9BSF8 475 aa14.37□□□□□ -0.11
PDLIM5-202ENST00000318007 LIN28AQ9H9Z2 209 aaKnown RBP14.37□□□□□ -0.11
PDLIM5-202ENST00000318007 NXT1Q9UKK6 140 aaKnown RBP14.37□□□□□ -0.11
PDLIM5-202ENST00000318007 PADI2Q9Y2J8 665 aa14.37□□□□□ -0.11
PDLIM5-202ENST00000318007 BLACEA4D250 179 aa14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 ERN1O75460 977 aaKnown RBP14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 ONECUT2O95948 504 aa14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 CELA2AP08217 269 aa14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 LIFP15018 202 aa14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 PTPN4P29074 926 aa14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 IGLV3-21P80748 117 aaPredicted RBP14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 RTP5Q14D33 572 aa14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 LRIF1Q5T3J3 769 aa14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 SLC44A2Q8IWA5 706 aaPredicted RBP14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 NUP43Q8NFH3 380 aa14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 OR10A6Q8NH74 314 aa14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 ROPN1LQ96C74 230 aa14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 ANKRD27Q96NW4 1050 aa14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 TUBB6Q9BUF5 446 aa14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 SEMA3GQ9NS98 782 aa14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 WASF3Q9UPY6 502 aa14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 DTX4Q9Y2E6 619 aa14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 HS3ST3B1Q9Y662 390 aa14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 HMGN2P05204 90 aaKnown RBP14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 NUDT7P0C024 238 aa14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 PRKAR1AP10644 381 aa14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 LIPCP11150 499 aa14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 ETFAP13804 333 aa14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 TRPC1P48995 793 aa14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 MGAT2Q10469 447 aa14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 COQ5Q5HYK3 327 aa14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 PAPD4Q6PIY7 484 aaKnown RBP14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 C16orf89Q6UX73 402 aa14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 MSANTD1Q6ZTZ1 278 aa14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 C6orf120Q7Z4R8 191 aa14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 DTX1Q86Y01 620 aa14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 SLC2A12Q8TD20 617 aa14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 ZFP90Q8TF47 636 aa14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 SLC9A6Q92581 669 aa14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 RAB8BQ92930 207 aa14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 MAL2Q969L2 176 aa14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 SENP5Q96HI0 755 aaPredicted RBP14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 SPAG4Q9NPE6 437 aa14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 GPATCH2Q9NW75 528 aa14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 CMTM6Q9NX76 183 aa14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 L3MBTL1Q9Y468 752 aa14.36□□□□□ -0.11
PDLIM5-202ENST00000318007 BOD1L1Q8NFC6 3051 aa14.35□□□□□ -0.11
PDLIM5-202ENST00000318007 CDC14CA4D256 554 aa14.35□□□□□ -0.11
PDLIM5-202ENST00000318007 NME4O00746 187 aa14.35□□□□□ -0.11
PDLIM5-202ENST00000318007 CBX7O95931 251 aa14.35□□□□□ -0.11
PDLIM5-202ENST00000318007 HOXB9P17482 250 aaPredicted RBP14.35□□□□□ -0.11
PDLIM5-202ENST00000318007 UQCRC2P22695 453 aa14.35□□□□□ -0.11
PDLIM5-202ENST00000318007 RFX3P48380 749 aa14.35□□□□□ -0.11
PDLIM5-202ENST00000318007 PRR5P85299 388 aa14.35□□□□□ -0.11
PDLIM5-202ENST00000318007 DUSP8Q13202 625 aa14.35□□□□□ -0.11
PDLIM5-202ENST00000318007 MLC1Q15049 377 aa14.35□□□□□ -0.11
PDLIM5-202ENST00000318007 ELAVL1Q15717 326 aaKnown RBP14.35□□□□□ -0.11
PDLIM5-202ENST00000318007 TBC1D25Q3MII6 688 aa14.35□□□□□ -0.11
PDLIM5-202ENST00000318007 OLIG3Q7RTU3 272 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms