RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 MAN2B2Q9Y2E5 1009 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 MUC22E2RYF6 1773 aaPredicted RBP7.2□□□□□ -1.26
TRIM55-202ENST00000315962 HEATR5BQ9P2D3 2071 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 ASXL3Q9C0F0 2248 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.19□□□□□ -1.26
TRIM55-202ENST00000315962 C1orf226A1L170 272 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 FAM170BA6NMN3 283 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 CCNKO75909 580 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 CCDC159P0C7I6 412 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 THEGLP0DJG4 465 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 HOXB9P17482 250 aaPredicted RBP7.19□□□□□ -1.26
TRIM55-202ENST00000315962 GPX2P18283 190 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 RRM2P31350 389 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 GPC1P35052 558 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 ASMTP46597 345 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 DUSP2Q05923 314 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 ABHD18Q0P651 414 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 NFATC4Q14934 902 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 MED22Q15528 200 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 GPR19Q15760 415 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 FRMPD2BQ6IN97 320 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 FAM71E1Q6IPT2 247 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 NRROSQ86YC3 692 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 HIPK1Q86Z02 1210 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 SIX5Q8N196 739 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 SETD7Q8WTS6 366 aaKnown RBP7.19□□□□□ -1.26
TRIM55-202ENST00000315962 XAGE5Q8WWM1 108 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 S100ZQ8WXG8 99 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 GTPBP3Q969Y2 492 aaKnown RBP7.19□□□□□ -1.26
TRIM55-202ENST00000315962 OR5M11Q96RB7 305 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 RBCK1Q9BYM8 510 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 NEK6Q9HC98 313 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 FAM120CQ9NX05 1096 aaKnown RBP7.19□□□□□ -1.26
TRIM55-202ENST00000315962 FBXL21Q9UKT6 434 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 RNF6Q9Y252 685 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 TTC28Q96AY4 2481 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 NCOR1O75376 2440 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 PLXND1Q9Y4D7 1925 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 OR2A25A4D2G3 310 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 NPIPB8E9PQR5 432 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 B4GALT2O60909 372 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 CDC123O75794 336 aaPredicted RBP7.19□□□□□ -1.26
TRIM55-202ENST00000315962 SCELO95171 688 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 FABP3P05413 133 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 FHP07954 510 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 CTSEP14091 401 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 GRK3P35626 688 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 PIK3CBP42338 1070 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 CASP3P42574 277 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 PPP5CP53041 499 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 MVDP53602 400 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 IRF3Q14653 427 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 DUSP7Q16829 419 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 SMU1Q2TAY7 513 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 EOGTQ5NDL2 527 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 OR4C11Q6IEV9 310 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 TSSK4Q6SA08 328 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 CEACAM20Q6UY09 585 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 GDPD3Q7L5L3 318 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 BCDIN3DQ7Z5W3 292 aaKnown RBP7.19□□□□□ -1.26
TRIM55-202ENST00000315962 CALHM3Q86XJ0 350 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 DEPDC4Q8N2C3 294 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 RAB42Q8N4Z0 105 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 LSM14AQ8ND56 463 aaKnown RBP7.19□□□□□ -1.26
TRIM55-202ENST00000315962 COQ8BQ96D53 544 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 VMP1Q96GC9 406 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 CCDC115Q96NT0 180 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 WFDC6Q9BQY6 131 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 PRR14Q9BWN1 585 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 DUSP21Q9H596 190 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 IL21RQ9HBE5 538 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 TAS2R9Q9NYW1 312 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 USE1Q9NZ43 259 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 EHD3Q9NZN3 535 aa7.19□□□□□ -1.26
TRIM55-202ENST00000315962 MRPS2Q9Y399 296 aaKnown RBP7.19□□□□□ -1.26
TRIM55-202ENST00000315962 CACNA1IQ9P0X4 2223 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 A0A1W2PR48 441 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 WWP2O00308 870 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 SLC16A6O15403 523 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 ZW10O43264 779 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 APOL3O95236 402 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 BCHEP06276 602 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 CHRNB1P11230 501 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 CKMT1AP12532 417 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 HSD3B1P14060 373 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 IL1RNP18510 177 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 SDHBP21912 280 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 HSD3B2P26439 372 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 SSTR4P31391 388 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 LSSP48449 732 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 ARHGDIAP52565 204 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 MRPS15P82914 257 aaKnown RBP7.18□□□□□ -1.26
TRIM55-202ENST00000315962 MRPS21P82921 87 aaKnown RBP7.18□□□□□ -1.26
TRIM55-202ENST00000315962 ILF3Q12906 894 aaKnown RBP eCLIP7.18□□□□□ -1.26
TRIM55-202ENST00000315962 NPRL3Q12980 569 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 TOR1AIP1Q5JTV8 583 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 SYT6Q5T7P8 510 aaPredicted RBP7.18□□□□□ -1.26
TRIM55-202ENST00000315962 SHQ1Q6PI26 577 aaKnown RBP7.18□□□□□ -1.26
TRIM55-202ENST00000315962 MEX3DQ86XN8 651 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms