RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 PLGLB1Q02325 96 aa13.08□□□□□ -0.32
CLCN6-201ENST00000312413 RAB11BQ15907 218 aa13.08□□□□□ -0.32
CLCN6-201ENST00000312413 SMYD5Q6GMV2 418 aa13.08□□□□□ -0.32
CLCN6-201ENST00000312413 TMEM225Q6GV28 225 aa13.08□□□□□ -0.32
CLCN6-201ENST00000312413 CFAP77Q6ZQR2 320 aa13.08□□□□□ -0.32
CLCN6-201ENST00000312413 VSTM5A8MXK1 200 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 ALDH3B1P43353 468 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 HNRNPFP52597 415 aaKnown RBP13.07□□□□□ -0.32
CLCN6-201ENST00000312413 NIPAL4Q0D2K0 466 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 CTU1Q7Z7A3 348 aaKnown RBP13.07□□□□□ -0.32
CLCN6-201ENST00000312413 PXKQ7Z7A4 578 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 SLC5A8Q8N695 610 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 SGTBQ96EQ0 304 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 RANBP9Q96S59 729 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 SULT4A1Q9BR01 284 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 A0A0A6YYH2 397 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 A6NJ64 397 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 INPPL1O15357 1258 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 HCRTR2O43614 444 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 ETV4P43268 484 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 RIDAP52758 137 aaKnown RBP13.07□□□□□ -0.32
CLCN6-201ENST00000312413 CYCSP99999 105 aaKnown RBP13.07□□□□□ -0.32
CLCN6-201ENST00000312413 CRHR2Q13324 411 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 ACBD4Q8NC06 268 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 CHPT1Q8WUD6 406 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 GATA6Q92908 595 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 C12orf42Q96LP6 360 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 STRA6Q9BX79 667 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 MEPEQ9NQ76 525 aaPredicted RBP13.07□□□□□ -0.32
CLCN6-201ENST00000312413 ENPP5Q9UJA9 477 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 ACSL5Q9ULC5 683 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 UBE2J1Q9Y385 318 aaPredicted RBP13.07□□□□□ -0.32
CLCN6-201ENST00000312413 CLEC3AO75596 197 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 SPDEFO95238 335 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 ASGR2P07307 311 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 PTPN6P29350 595 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 ZNF791Q3KP31 576 aaPredicted RBP13.07□□□□□ -0.32
CLCN6-201ENST00000312413 SLC7A5P1Q8MH63 180 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 ESX1Q8N693 406 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 FRS2Q8WU20 508 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 ZFP57Q9NU63 452 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 A0A0D9SEW6 157 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 A0A0U1RQF3 1178 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 A0A1B0GV50 99 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 CDK2P24941 298 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 PITPNBP48739 271 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 ARHGAP1Q07960 439 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 CRYZQ08257 329 aaKnown RBP13.07□□□□□ -0.32
CLCN6-201ENST00000312413 TRMT10AQ8TBZ6 339 aaKnown RBP13.07□□□□□ -0.32
CLCN6-201ENST00000312413 FKBP10Q96AY3 582 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 SLC6A16Q9GZN6 736 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 MMP28Q9H239 520 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 MAN2C1Q9NTJ4 1040 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 SHMT2P34897 504 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 PRMT2P55345 433 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 CDK5R2Q13319 367 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 ZNF792Q3KQV3 632 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 LRIT3Q3SXY7 679 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 MLIPQ5VWP3 458 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 C14orf80Q86SX3 495 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 OR13C3Q8NGS6 347 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 PCDHGA7Q9Y5G6 932 aa13.07□□□□□ -0.32
CLCN6-201ENST00000312413 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.06□□□□□ -0.32
CLCN6-201ENST00000312413 SLC22A5O76082 557 aa13.06□□□□□ -0.32
CLCN6-201ENST00000312413 HRGP04196 525 aa13.06□□□□□ -0.32
CLCN6-201ENST00000312413 ZNF35P13682 527 aa13.06□□□□□ -0.32
CLCN6-201ENST00000312413 OSMP13725 252 aa13.06□□□□□ -0.32
CLCN6-201ENST00000312413 GPR4P46093 362 aa13.06□□□□□ -0.32
CLCN6-201ENST00000312413 KCNC1P48547 511 aa13.06□□□□□ -0.32
CLCN6-201ENST00000312413 PLP2Q04941 152 aa13.06□□□□□ -0.32
CLCN6-201ENST00000312413 WDR6Q9NNW5 1121 aaKnown RBP13.06□□□□□ -0.32
CLCN6-201ENST00000312413 CRTAC1Q9NQ79 661 aa13.06□□□□□ -0.32
CLCN6-201ENST00000312413 FBXL12Q9NXK8 326 aa13.06□□□□□ -0.32
CLCN6-201ENST00000312413 NUBP2Q9Y5Y2 271 aa13.06□□□□□ -0.32
CLCN6-201ENST00000312413 STYXL1Q9Y6J8 313 aa13.06□□□□□ -0.32
CLCN6-201ENST00000312413 C1orf226A1L170 272 aa13.06□□□□□ -0.32
CLCN6-201ENST00000312413 ANHXE9PGG2 379 aa13.06□□□□□ -0.32
CLCN6-201ENST00000312413 F5H5P2 479 aa13.06□□□□□ -0.32
CLCN6-201ENST00000312413 POLR1CO15160 346 aaPredicted RBP13.06□□□□□ -0.32
CLCN6-201ENST00000312413 TRAPPC6AO75865 159 aa13.06□□□□□ -0.32
CLCN6-201ENST00000312413 AQP2P41181 271 aa13.06□□□□□ -0.32
CLCN6-201ENST00000312413 IDH3GP51553 393 aaPredicted RBP13.06□□□□□ -0.32
CLCN6-201ENST00000312413 CDKN2DP55273 166 aa13.06□□□□□ -0.32
CLCN6-201ENST00000312413 MS4A2Q01362 244 aa13.06□□□□□ -0.32
CLCN6-201ENST00000312413 EIF4HQ15056 248 aaKnown RBP13.06□□□□□ -0.32
CLCN6-201ENST00000312413 AKR1C8PQ5T2L2 129 aa13.06□□□□□ -0.32
CLCN6-201ENST00000312413 OR4K5Q8NGD3 323 aa13.06□□□□□ -0.32
CLCN6-201ENST00000312413 LMO3Q8TAP4 145 aa13.06□□□□□ -0.32
CLCN6-201ENST00000312413 PRAF2O60831 178 aa13.06□□□□□ -0.32
CLCN6-201ENST00000312413 JRKO75564 520 aa13.06□□□□□ -0.32
CLCN6-201ENST00000312413 ADORA3P0DMS8 318 aa13.06□□□□□ -0.32
CLCN6-201ENST00000312413 FDXRP22570 491 aa13.06□□□□□ -0.32
CLCN6-201ENST00000312413 CNIH2Q6PI25 160 aa13.06□□□□□ -0.32
CLCN6-201ENST00000312413 PIWIL3Q7Z3Z3 882 aaKnown RBP13.06□□□□□ -0.32
CLCN6-201ENST00000312413 TRAM1L1Q8N609 369 aa13.06□□□□□ -0.32
CLCN6-201ENST00000312413 GATSQ8NAP1 163 aa13.06□□□□□ -0.32
CLCN6-201ENST00000312413 SCAMP2O15127 329 aaKnown RBP13.06□□□□□ -0.32
CLCN6-201ENST00000312413 GRPRP30550 384 aa13.06□□□□□ -0.32
CLCN6-201ENST00000312413 GALNT1Q10472 559 aaPredicted RBP13.06□□□□□ -0.32
CLCN6-201ENST00000312413 GPR17Q13304 367 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms