RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 OR52R1Q8NGF1 315 aa11.14□□□□□ -0.63
SCFD1-201ENST00000311943 MARK4Q96L34 752 aa11.14□□□□□ -0.63
SCFD1-201ENST00000311943 ITPAQ9BY32 194 aa11.14□□□□□ -0.63
SCFD1-201ENST00000311943 WWTR1Q9GZV5 400 aa11.14□□□□□ -0.63
SCFD1-201ENST00000311943 NXF5Q9H1B4 397 aaKnown RBP11.14□□□□□ -0.63
SCFD1-201ENST00000311943 OR10A5Q9H207 317 aa11.14□□□□□ -0.63
SCFD1-201ENST00000311943 GLIPR2Q9H4G4 154 aa11.14□□□□□ -0.63
SCFD1-201ENST00000311943 AKTIPQ9H8T0 292 aa11.14□□□□□ -0.63
SCFD1-201ENST00000311943 EML4Q9HC35 981 aaKnown RBP11.14□□□□□ -0.63
SCFD1-201ENST00000311943 SLC35C2Q9NQQ7 365 aa11.14□□□□□ -0.63
SCFD1-201ENST00000311943 BCAP29Q9UHQ4 241 aa11.14□□□□□ -0.63
SCFD1-201ENST00000311943 ERVK-11Q9UQG0 969 aa11.14□□□□□ -0.63
SCFD1-201ENST00000311943 C2orf72A6NCS6 295 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 NPIPB8E9PQR5 432 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 PRAMEF2O60811 474 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 SP1P08047 785 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 CCL3P10147 92 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 G6PDP11413 515 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 COX7A2P14406 83 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 CD1EP15812 388 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 PIGAP37287 484 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 CYB561P49447 251 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 NME5P56597 212 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 KCNK10P57789 538 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 FUT7Q11130 342 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 SF3A3Q12874 501 aaKnown RBP eCLIP11.13□□□□□ -0.63
SCFD1-201ENST00000311943 SPRED3Q2MJR0 410 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 ZNF628Q5EBL2 1059 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 TMEM107Q6UX40 140 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 RNF111Q6ZNA4 994 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 HDXQ7Z353 690 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 SULF2Q8IWU5 870 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 CLEC4FQ8N1N0 589 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 ARMC10Q8N2F6 343 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 VWA5B2Q8N398 1253 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 OR4N2Q8NGD1 307 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 CTHRC1Q96CG8 243 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 THOC1Q96FV9 657 aaKnown RBP11.13□□□□□ -0.63
SCFD1-201ENST00000311943 FCRL1Q96LA6 429 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 SIRT5Q9NXA8 310 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 TEKT2Q9UIF3 430 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 MYO18BQ8IUG5 2567 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 TRAV17A0A0B4J275 112 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 GOLGA6L10A6NI86 522 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 SNNO75324 88 aaPredicted RBP11.13□□□□□ -0.63
SCFD1-201ENST00000311943 ATP1B1P05026 303 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 CSNK2A2P19784 350 aaPredicted RBP11.13□□□□□ -0.63
SCFD1-201ENST00000311943 PRPH2P23942 346 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 MC3RP41968 323 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 DNASE1L1P49184 302 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 HLCSP50747 726 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 CDK9P50750 372 aaKnown RBP11.13□□□□□ -0.63
SCFD1-201ENST00000311943 RPL14P50914 215 aaKnown RBP11.13□□□□□ -0.63
SCFD1-201ENST00000311943 AGBL2Q5U5Z8 902 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 GALNT10Q86SR1 603 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 CYP4Z2PQ8N1L4 340 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 LRRC25Q8N386 305 aaPredicted RBP11.13□□□□□ -0.63
SCFD1-201ENST00000311943 FNDC5Q8NAU1 212 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 FBXO30Q8TB52 745 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 ADIPOR1Q96A54 375 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 TEX37Q96LM6 180 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 FAIM2Q9BWQ8 316 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 MYNNQ9NPC7 610 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 MIEF1Q9NQG6 463 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 TNFRSF10DQ9UBN6 386 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 COPS7AQ9UBW8 275 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 ZNF639Q9UID6 485 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 RAP2CQ9Y3L5 183 aa11.13□□□□□ -0.63
SCFD1-201ENST00000311943 UQCRHLA0A096LP55 91 aa11.12□□□□□ -0.63
SCFD1-201ENST00000311943 SEMA7AO75326 666 aa11.12□□□□□ -0.63
SCFD1-201ENST00000311943 WISP1O95388 367 aa11.12□□□□□ -0.63
SCFD1-201ENST00000311943 CBX6O95503 412 aa11.12□□□□□ -0.63
SCFD1-201ENST00000311943 CHEK2O96017 543 aa11.12□□□□□ -0.63
SCFD1-201ENST00000311943 LAMP1P11279 417 aa11.12□□□□□ -0.63
SCFD1-201ENST00000311943 GPX3P22352 226 aa11.12□□□□□ -0.63
SCFD1-201ENST00000311943 EPHA3P29320 983 aa11.12□□□□□ -0.63
SCFD1-201ENST00000311943 EMDP50402 254 aa11.12□□□□□ -0.63
SCFD1-201ENST00000311943 SSR4P51571 173 aa11.12□□□□□ -0.63
SCFD1-201ENST00000311943 NCBP2P52298 156 aaKnown RBP eCLIP11.12□□□□□ -0.636e-13■■□□□ 13
SCFD1-201ENST00000311943 FBXW4P57775 412 aa11.12□□□□□ -0.63
SCFD1-201ENST00000311943 TRA2BP62995 288 aaKnown RBP11.12□□□□□ -0.63
SCFD1-201ENST00000311943 OCRLQ01968 901 aa11.12□□□□□ -0.63
SCFD1-201ENST00000311943 HSPB3Q12988 150 aa11.12□□□□□ -0.63
SCFD1-201ENST00000311943 HEPACAMQ14CZ8 416 aa11.12□□□□□ -0.63
SCFD1-201ENST00000311943 TMEM198Q66K66 360 aa11.12□□□□□ -0.63
SCFD1-201ENST00000311943 SLC25A25Q6KCM7 469 aa11.12□□□□□ -0.63
SCFD1-201ENST00000311943 NCCRP1Q6ZVX7 275 aaPredicted RBP11.12□□□□□ -0.63
SCFD1-201ENST00000311943 WDR75Q8IWA0 830 aaKnown RBP11.12□□□□□ -0.63
SCFD1-201ENST00000311943 OR10G3Q8NGC4 313 aa11.12□□□□□ -0.63
SCFD1-201ENST00000311943 PRR7Q8TB68 274 aa11.12□□□□□ -0.63
SCFD1-201ENST00000311943 FAR1Q8WVX9 515 aa11.12□□□□□ -0.63
SCFD1-201ENST00000311943 ZNF75CPQ92670 426 aaPredicted RBP11.12□□□□□ -0.63
SCFD1-201ENST00000311943 SCMH1Q96GD3 660 aa11.12□□□□□ -0.63
SCFD1-201ENST00000311943 BARD1Q99728 777 aaKnown RBP11.12□□□□□ -0.63
SCFD1-201ENST00000311943 MANSC1Q9H8J5 431 aa11.12□□□□□ -0.63
SCFD1-201ENST00000311943 PROK2Q9HC23 129 aa11.12□□□□□ -0.63
SCFD1-201ENST00000311943 SH3BP4Q9P0V3 963 aa11.12□□□□□ -0.63
SCFD1-201ENST00000311943 ZNF780BQ9Y6R6 833 aa11.12□□□□□ -0.63
SCFD1-201ENST00000311943 ZGRF1Q86YA3 2104 aa11.12□□□□□ -0.63
SCFD1-201ENST00000311943 NCKAP5O14513 1909 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms