RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 JSRP1Q96MG2 331 aaPredicted RBP7.83□□□□□ -1.16
VPS41-202ENST00000310301 FRG2BQ96QU4 278 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 FCRL5Q96RD9 977 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 RPS10P5Q9NQ39 176 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 PRMT8Q9NR22 394 aaPredicted RBP7.83□□□□□ -1.16
VPS41-202ENST00000310301 YBX2Q9Y2T7 364 aaKnown RBP7.83□□□□□ -1.16
VPS41-202ENST00000310301 PCDHGB5Q9Y5G0 923 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 TEX13CA0A0J9YWL9 993 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 LCHNA4D1U4 455 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 TMEM221A6NGB7 291 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 EEF1E1-BLOC1S5C9J1V9 151 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 TSTD3H0UI37 97 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 M0R296 226 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 MUSKO15146 869 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 HSD3B1P14060 373 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 CD6P30203 668 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 IRS1P35568 1242 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 EIF1AXP47813 144 aaKnown RBP7.83□□□□□ -1.16
VPS41-202ENST00000310301 SSTP61278 116 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 GALEQ14376 348 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 EXOC3L2Q2M3D2 409 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.83□□□□□ -1.16
VPS41-202ENST00000310301 NCBP2-AS2Q69YL0 99 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 RASGRP3Q8IV61 690 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 SAMD14Q8IZD0 417 aaPredicted RBP7.83□□□□□ -1.16
VPS41-202ENST00000310301 OR5T1Q8NG75 326 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 KCNN1Q92952 543 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 NAT6Q93015 286 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 TESCQ96BS2 214 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 C16orf58Q96GQ5 468 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 HHIPQ96QV1 700 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 NEUROD4Q9HD90 331 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 A0A1B0GTW7 788 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 B4DGG1 531 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 LOC730098B7Z3J9 87 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 TNFRSF10AO00220 468 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 CDC7O00311 574 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 CYP17A1P05093 508 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 EIF2DP41214 584 aaKnown RBP7.82□□□□□ -1.16
VPS41-202ENST00000310301 HCAR3P49019 387 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 PRKXP51817 358 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 EMX2Q04743 252 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 TRAM1Q15629 374 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 CST6Q15828 149 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 CDNFQ49AH0 187 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 SPEM1Q8N4L4 309 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 OR6Q1Q8NGQ2 317 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 SNAPC3Q92966 411 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 PTERQ96BW5 349 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 WDR92Q96MX6 357 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 CACNG6Q9BXT2 260 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 MYNNQ9NPC7 610 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 CD300AQ9UGN4 299 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 SLC2A6Q9UGQ3 507 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 SIX4Q9UIU6 781 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 LAMP5Q9UJQ1 280 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 PI15O43692 258 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 IFNA1P01562 189 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 PTNP21246 168 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 CASRP41180 1078 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 PRAMEF13Q5VWM6 474 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 B3GNT9Q6UX72 402 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 Q6ZVU0 165 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 ZDHHC14Q8IZN3 488 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 TMEM145Q8NBT3 493 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 CHDHQ8NE62 594 aaPredicted RBP7.82□□□□□ -1.16
VPS41-202ENST00000310301 KLK6Q92876 244 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 C1orf74Q96LT6 269 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 SECISBP2Q96T21 854 aaKnown RBP7.82□□□□□ -1.16
VPS41-202ENST00000310301 GPR22Q99680 433 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 PAAF1Q9BRP4 392 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 RBCK1Q9BYM8 510 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.82□□□□□ -1.16
VPS41-202ENST00000310301 SIRPGQ9P1W8 387 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 CNOT11Q9UKZ1 510 aaKnown RBP7.82□□□□□ -1.16
VPS41-202ENST00000310301 TTC24A2A3L6 582 aaPredicted RBP7.82□□□□□ -1.16
VPS41-202ENST00000310301 RNGTTO60942 597 aaKnown RBP7.82□□□□□ -1.16
VPS41-202ENST00000310301 RGS9O75916 674 aaPredicted RBP7.82□□□□□ -1.16
VPS41-202ENST00000310301 IFNA5P01569 189 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 ZNF630Q2M218 657 aaPredicted RBP7.82□□□□□ -1.16
VPS41-202ENST00000310301 NKAPLQ5M9Q1 402 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 TXNRD3NBQ6F5E7 133 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 SLC39A4Q6P5W5 647 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 NUDT13Q86X67 352 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 NPAS3Q8IXF0 933 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 LILRB4Q8NHJ6 448 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 C17orf62Q9BQA9 187 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 RNF121Q9H920 327 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 MRPS30Q9NP92 439 aaKnown RBP7.82□□□□□ -1.16
VPS41-202ENST00000310301 FAM120CQ9NX05 1096 aaKnown RBP7.82□□□□□ -1.16
VPS41-202ENST00000310301 NLGN3Q9NZ94 848 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 MEIS3P2A8K0S8 358 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 JUNP05412 331 aaKnown RBP7.82□□□□□ -1.16
VPS41-202ENST00000310301 HLA-DQB2P05538 268 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 CSNK2A2P19784 350 aaPredicted RBP7.82□□□□□ -1.16
VPS41-202ENST00000310301 GNRHRP30968 328 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 HSD17B2P37059 387 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 LSSP48449 732 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 MC2RQ01718 297 aa7.82□□□□□ -1.16
VPS41-202ENST00000310301 ZNF678Q5SXM1 525 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms