RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 HOXD1Q9GZZ0 328 aa5.71□□□□□ -1.5
SEC22A-201ENST00000309934 NANOGQ9H9S0 305 aa5.71□□□□□ -1.5
SEC22A-201ENST00000309934 POLR1BQ9H9Y6 1135 aa5.71□□□□□ -1.5
SEC22A-201ENST00000309934 TPT1P8Q9HAU6 139 aa5.71□□□□□ -1.5
SEC22A-201ENST00000309934 TM9SF3Q9HD45 589 aa5.71□□□□□ -1.5
SEC22A-201ENST00000309934 CLEC1BQ9P126 229 aa5.71□□□□□ -1.5
SEC22A-201ENST00000309934 COPZ2Q9P299 210 aa5.71□□□□□ -1.5
SEC22A-201ENST00000309934 REV1Q9UBZ9 1251 aa5.71□□□□□ -1.5
SEC22A-201ENST00000309934 PCOLCE2Q9UKZ9 415 aa5.71□□□□□ -1.5
SEC22A-201ENST00000309934 HSPE1-MOB4S4R3N1 261 aa5.71□□□□□ -1.5
SEC22A-201ENST00000309934 FAM149AA5PLN7 773 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 E7EQ34 232 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 G3V2T6 193 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 PSMD9O00233 223 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 TRIM24O15164 1050 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 MRPS14O60783 128 aaKnown RBP5.7□□□□□ -1.5
SEC22A-201ENST00000309934 IGLV3-19P01714 112 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 KLK1P06870 262 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 IFI6P09912 130 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 ENGP17813 658 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 YAP1P46937 504 aaKnown RBP5.7□□□□□ -1.5
SEC22A-201ENST00000309934 HK3P52790 923 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 DGKQP52824 942 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 PFN3P60673 137 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 BTN1A1Q13410 526 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 DNASE1L3Q13609 305 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 SCARB2Q14108 478 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 GRB7Q14451 532 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 NR0B2Q15466 257 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 ATP6AP1Q15904 470 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 TMEM198Q66K66 360 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 REEP3Q6NUK4 255 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 LMNTD1Q8N9Z9 388 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 ZNF248Q8NDW4 579 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 OR4E2Q8NGC2 313 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 LKAAEAR1Q8TD35 194 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 VWCEQ96DN2 955 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 PYURFQ96I23 114 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 PIP5K1AQ99755 562 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 DPH7Q9BTV6 452 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 STRADBQ9C0K7 418 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 RACGAP1Q9H0H5 632 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 RIBC2Q9H4K1 309 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 TBC1D17Q9HA65 648 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 LYRM4Q9HD34 91 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 NIT2Q9NQR4 276 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 OLAHQ9NV23 265 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 USE1Q9NZ43 259 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 CPNE7Q9UBL6 633 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 COPS7AQ9UBW8 275 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 EBF1Q9UH73 591 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 DLGAP4Q9Y2H0 992 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 SCN5AQ14524 2016 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 METTL12A8MUP2 240 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 H0YAE9 185 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 RFXAPO00287 272 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 ZNF195O14628 629 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 HSPA12AO43301 675 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 TBX10O75333 385 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 PNPP00491 289 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 TGFB1P01137 390 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 ASGR2P07307 311 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 GNAO1P09471 354 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 PRKCAP17252 672 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 NELFEP18615 380 aaKnown RBP5.7□□□□□ -1.5
SEC22A-201ENST00000309934 NDUFV2P19404 249 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 GGT1P19440 569 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 ALDH4A1P30038 563 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 PCGF2P35227 344 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 IGFALSP35858 605 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 EMP3P54852 163 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 TAS2R50P59544 299 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 BNIP3Q12983 259 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 UGT3A2Q3SY77 523 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 CRTC2Q53ET0 693 aaPredicted RBP5.7□□□□□ -1.5
SEC22A-201ENST00000309934 SPANXN4Q5MJ08 99 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 EIF3MQ7L2H7 374 aaKnown RBP5.7□□□□□ -1.5
SEC22A-201ENST00000309934 COMMD6Q7Z4G1 85 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 ZER1Q7Z7L7 766 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 AMIGO2Q86SJ2 522 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 PTRH1Q86Y79 214 aaKnown RBP5.7□□□□□ -1.5
SEC22A-201ENST00000309934 KIF18BQ86Y91 864 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 TIGD4Q8IY51 512 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 OR5AR1Q8NGP9 310 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 CHTF18Q8WVB6 975 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 PYDC1Q8WXC3 89 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 ESAMQ96AP7 390 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 KCNA7Q96RP8 456 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 INSM2Q96T92 566 aaPredicted RBP5.7□□□□□ -1.5
SEC22A-201ENST00000309934 ACPTQ9BZG2 426 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 PPA2Q9H2U2 334 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 ZNF395Q9H8N7 513 aaPredicted RBP5.7□□□□□ -1.5
SEC22A-201ENST00000309934 IL1RAPQ9NPH3 570 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 IFT46Q9NQC8 304 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 C1GALT1Q9NS00 363 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 SMPD3Q9NY59 655 aaPredicted RBP5.7□□□□□ -1.5
SEC22A-201ENST00000309934 TAAR2Q9P1P5 351 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 SEC14L3Q9UDX4 400 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 UTS2RQ9UKP6 389 aa5.7□□□□□ -1.5
SEC22A-201ENST00000309934 CA5BQ9Y2D0 317 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms