RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 ACAD11Q709F0 780 aa8.44□□□□□ -1.06
PDE4D-201ENST00000309641 ZNF615Q8N8J6 731 aa8.44□□□□□ -1.06
PDE4D-201ENST00000309641 COQ8BQ96D53 544 aa8.44□□□□□ -1.06
PDE4D-201ENST00000309641 MAGED4Q96JG8 741 aa8.44□□□□□ -1.06
PDE4D-201ENST00000309641 AGAP4Q96P64 663 aa8.44□□□□□ -1.06
PDE4D-201ENST00000309641 DEFB126Q9BYW3 111 aa8.44□□□□□ -1.06
PDE4D-201ENST00000309641 DPY30Q9C005 99 aa8.44□□□□□ -1.06
PDE4D-201ENST00000309641 RABEP2Q9H5N1 569 aa8.44□□□□□ -1.06
PDE4D-201ENST00000309641 CPAMD8Q8IZJ3 1885 aa8.44□□□□□ -1.06
PDE4D-201ENST00000309641 WWP2O00308 870 aa8.44□□□□□ -1.06
PDE4D-201ENST00000309641 TBX19O60806 448 aa8.44□□□□□ -1.06
PDE4D-201ENST00000309641 SCN2BO60939 215 aa8.44□□□□□ -1.06
PDE4D-201ENST00000309641 C1QCP02747 245 aa8.44□□□□□ -1.06
PDE4D-201ENST00000309641 PRB1P04280 392 aa8.44□□□□□ -1.06
PDE4D-201ENST00000309641 LSP1P33241 339 aa8.44□□□□□ -1.06
PDE4D-201ENST00000309641 GALNSP34059 522 aa8.44□□□□□ -1.06
PDE4D-201ENST00000309641 HPCAL1P37235 193 aa8.44□□□□□ -1.06
PDE4D-201ENST00000309641 C21orf58P58505 322 aa8.44□□□□□ -1.06
PDE4D-201ENST00000309641 RNF4P78317 190 aa8.44□□□□□ -1.06
PDE4D-201ENST00000309641 BIKQ13323 160 aa8.44□□□□□ -1.06
PDE4D-201ENST00000309641 FAM174BQ3ZCQ3 159 aa8.44□□□□□ -1.06
PDE4D-201ENST00000309641 CPTPQ5TA50 214 aa8.44□□□□□ -1.06
PDE4D-201ENST00000309641 FHL5Q5TD97 284 aa8.44□□□□□ -1.06
PDE4D-201ENST00000309641 PAOXQ6QHF9 649 aa8.44□□□□□ -1.06
PDE4D-201ENST00000309641 ISLR2Q6UXK2 745 aa8.44□□□□□ -1.06
PDE4D-201ENST00000309641 HSDL2Q6YN16 418 aa8.44□□□□□ -1.06
PDE4D-201ENST00000309641 WDR53Q7Z5U6 358 aaPredicted RBP8.44□□□□□ -1.06
PDE4D-201ENST00000309641 ANKRD46Q86W74 232 aa8.44□□□□□ -1.06
PDE4D-201ENST00000309641 RPS19BP1Q86WX3 136 aaKnown RBP8.44□□□□□ -1.06
PDE4D-201ENST00000309641 PTRH1Q86Y79 214 aaKnown RBP8.44□□□□□ -1.06
PDE4D-201ENST00000309641 CLECL1Q8IZS7 167 aa8.44□□□□□ -1.06
PDE4D-201ENST00000309641 BEST3Q8N1M1 668 aa8.44□□□□□ -1.06
PDE4D-201ENST00000309641 OR52R1Q8NGF1 315 aa8.44□□□□□ -1.06
PDE4D-201ENST00000309641 C9orf43Q8TAL5 461 aaPredicted RBP8.44□□□□□ -1.06
PDE4D-201ENST00000309641 MTERF3Q96E29 417 aa8.44□□□□□ -1.06
PDE4D-201ENST00000309641 ZNF764Q96H86 408 aaPredicted RBP8.44□□□□□ -1.06
PDE4D-201ENST00000309641 PELOQ9BRX2 385 aaKnown RBP8.44□□□□□ -1.06
PDE4D-201ENST00000309641 TMEM120AQ9BXJ8 343 aa8.44□□□□□ -1.06
PDE4D-201ENST00000309641 TRIM4Q9C037 500 aa8.44□□□□□ -1.06
PDE4D-201ENST00000309641 CLMPQ9H6B4 373 aa8.44□□□□□ -1.06
PDE4D-201ENST00000309641 SDR39U1Q9NRG7 319 aaPredicted RBP8.44□□□□□ -1.06
PDE4D-201ENST00000309641 SIRT3Q9NTG7 399 aaPredicted RBP8.44□□□□□ -1.06
PDE4D-201ENST00000309641 GIMAP4Q9NUV9 329 aa8.44□□□□□ -1.06
PDE4D-201ENST00000309641 STMN3Q9NZ72 180 aa8.44□□□□□ -1.06
PDE4D-201ENST00000309641 COPS7AQ9UBW8 275 aa8.44□□□□□ -1.06
PDE4D-201ENST00000309641 OR2J2O76002 312 aa8.43□□□□□ -1.06
PDE4D-201ENST00000309641 ZFAND5O76080 213 aa8.43□□□□□ -1.06
PDE4D-201ENST00000309641 C6orf47O95873 294 aa8.43□□□□□ -1.06
PDE4D-201ENST00000309641 WDPCPO95876 746 aa8.43□□□□□ -1.06
PDE4D-201ENST00000309641 IDO1P14902 403 aa8.43□□□□□ -1.06
PDE4D-201ENST00000309641 GPX3P22352 226 aa8.43□□□□□ -1.06
PDE4D-201ENST00000309641 NTSP30990 170 aa8.43□□□□□ -1.06
PDE4D-201ENST00000309641 EMDP50402 254 aa8.43□□□□□ -1.06
PDE4D-201ENST00000309641 MANFP55145 182 aaKnown RBP8.43□□□□□ -1.06
PDE4D-201ENST00000309641 EBPQ15125 230 aaKnown RBP8.43□□□□□ -1.06
PDE4D-201ENST00000309641 NNATQ16517 81 aa8.43□□□□□ -1.06
PDE4D-201ENST00000309641 CRB2Q5IJ48 1285 aa8.43□□□□□ -1.06
PDE4D-201ENST00000309641 IRAK1BP1Q5VVH5 260 aa8.43□□□□□ -1.06
PDE4D-201ENST00000309641 JMJD6Q6NYC1 403 aaPredicted RBP8.43□□□□□ -1.06
PDE4D-201ENST00000309641 TMEM64Q6YI46 380 aa8.43□□□□□ -1.06
PDE4D-201ENST00000309641 RNF111Q6ZNA4 994 aa8.43□□□□□ -1.06
PDE4D-201ENST00000309641 ASB18Q6ZVZ8 466 aa8.43□□□□□ -1.06
PDE4D-201ENST00000309641 R3HCC1LQ7Z5L2 792 aaKnown RBP8.43□□□□□ -1.06
PDE4D-201ENST00000309641 FAM9CQ8IZT9 166 aa8.43□□□□□ -1.06
PDE4D-201ENST00000309641 CLEC4FQ8N1N0 589 aa8.43□□□□□ -1.06
PDE4D-201ENST00000309641 RBMXL3Q8N7X1 1067 aaKnown RBP8.43□□□□□ -1.06
PDE4D-201ENST00000309641 CATSPER1Q8NEC5 780 aa8.43□□□□□ -1.06
PDE4D-201ENST00000309641 C16orf52Q8NHV5 167 aa8.43□□□□□ -1.06
PDE4D-201ENST00000309641 ZNF675Q8TD23 568 aa8.43□□□□□ -1.06
PDE4D-201ENST00000309641 ELP4Q96EB1 424 aa8.43□□□□□ -1.06
PDE4D-201ENST00000309641 RILPQ96NA2 401 aa8.43□□□□□ -1.06
PDE4D-201ENST00000309641 GAL3ST4Q96RP7 486 aa8.43□□□□□ -1.06
PDE4D-201ENST00000309641 CCDC28BQ9BUN5 200 aa8.43□□□□□ -1.06
PDE4D-201ENST00000309641 DUSP26Q9BV47 211 aa8.43□□□□□ -1.06
PDE4D-201ENST00000309641 MFRPQ9BY79 579 aa8.43□□□□□ -1.06
PDE4D-201ENST00000309641 OR10A5Q9H207 317 aa8.43□□□□□ -1.06
PDE4D-201ENST00000309641 LUZP4Q9P127 313 aa8.43□□□□□ -1.06
PDE4D-201ENST00000309641 MYOTQ9UBF9 498 aa8.43□□□□□ -1.06
PDE4D-201ENST00000309641 BCAP29Q9UHQ4 241 aa8.43□□□□□ -1.06
PDE4D-201ENST00000309641 COPG1Q9Y678 874 aaKnown RBP8.43□□□□□ -1.06
PDE4D-201ENST00000309641 A0A1W2PRB8 838 aa8.42□□□□□ -1.06
PDE4D-201ENST00000309641 SYNDIG1LA6NDD5 238 aa8.42□□□□□ -1.06
PDE4D-201ENST00000309641 UPK1AO00322 258 aa8.42□□□□□ -1.06
PDE4D-201ENST00000309641 ATXN7O15265 892 aaPredicted RBP8.42□□□□□ -1.06
PDE4D-201ENST00000309641 DYRK3O43781 588 aa8.42□□□□□ -1.06
PDE4D-201ENST00000309641 ITGA10O75578 1167 aa8.42□□□□□ -1.06
PDE4D-201ENST00000309641 ABCB1P08183 1280 aaPredicted RBP8.42□□□□□ -1.06
PDE4D-201ENST00000309641 MLF1P58340 268 aa8.42□□□□□ -1.06
PDE4D-201ENST00000309641 GNGT1P63211 74 aa8.42□□□□□ -1.06
PDE4D-201ENST00000309641 HBA1P69905 142 aa8.42□□□□□ -1.06
PDE4D-201ENST00000309641 MFAP5Q13361 173 aa8.42□□□□□ -1.06
PDE4D-201ENST00000309641 RPS6KA2Q15349 733 aa8.42□□□□□ -1.06
PDE4D-201ENST00000309641 NADK2Q4G0N4 442 aa8.42□□□□□ -1.06
PDE4D-201ENST00000309641 LACTB2Q53H82 288 aaPredicted RBP8.42□□□□□ -1.06
PDE4D-201ENST00000309641 ABHD17BQ5VST6 288 aa8.42□□□□□ -1.06
PDE4D-201ENST00000309641 IGFL2Q6UWQ7 119 aa8.42□□□□□ -1.06
PDE4D-201ENST00000309641 CAMKMTQ7Z624 323 aa8.42□□□□□ -1.06
PDE4D-201ENST00000309641 ZNF227Q86WZ6 799 aa8.42□□□□□ -1.06
PDE4D-201ENST00000309641 FUNDC1Q8IVP5 155 aa8.42□□□□□ -1.06
PDE4D-201ENST00000309641 SAMD14Q8IZD0 417 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms