RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 CYR61O00622 381 aa19.98■□□□□ 0.79
ATG4D-201ENST00000309469 BCKDKO14874 412 aa19.98■□□□□ 0.79
ATG4D-201ENST00000309469 CTSBP07858 339 aa19.98■□□□□ 0.79
ATG4D-201ENST00000309469 CPMP14384 443 aa19.98■□□□□ 0.79
ATG4D-201ENST00000309469 FUT5Q11128 374 aa19.98■□□□□ 0.79
ATG4D-201ENST00000309469 ZNF605Q86T29 641 aa19.98■□□□□ 0.79
ATG4D-201ENST00000309469 CA13Q8N1Q1 262 aa19.98■□□□□ 0.79
ATG4D-201ENST00000309469 OR52J3Q8NH60 311 aa19.98■□□□□ 0.79
ATG4D-201ENST00000309469 GIMAP5Q96F15 307 aa19.98■□□□□ 0.79
ATG4D-201ENST00000309469 TCTN2Q96GX1 697 aa19.98■□□□□ 0.79
ATG4D-201ENST00000309469 ZNF354BQ96LW1 612 aa19.98■□□□□ 0.79
ATG4D-201ENST00000309469 NPLQ9BXD5 320 aaPredicted RBP19.98■□□□□ 0.79
ATG4D-201ENST00000309469 EQTNQ9NQ60 294 aa19.98■□□□□ 0.79
ATG4D-201ENST00000309469 ACER3Q9NUN7 267 aa19.98■□□□□ 0.79
ATG4D-201ENST00000309469 UCKL1Q9NWZ5 548 aa19.98■□□□□ 0.79
ATG4D-201ENST00000309469 TDRD6O60522 2096 aaKnown RBP19.97■□□□□ 0.79
ATG4D-201ENST00000309469 BCAT2O15382 392 aaPredicted RBP19.97■□□□□ 0.79
ATG4D-201ENST00000309469 SRPX2O60687 465 aaPredicted RBP19.97■□□□□ 0.79
ATG4D-201ENST00000309469 PIAS2O75928 621 aa19.97■□□□□ 0.79
ATG4D-201ENST00000309469 CHRM4P08173 479 aa19.97■□□□□ 0.79
ATG4D-201ENST00000309469 PORP16435 677 aaPredicted RBP19.97■□□□□ 0.79
ATG4D-201ENST00000309469 GSTT1P30711 240 aa19.97■□□□□ 0.79
ATG4D-201ENST00000309469 ALDH3B2P48448 385 aa19.97■□□□□ 0.79
ATG4D-201ENST00000309469 MAN2A2P49641 1150 aa19.97■□□□□ 0.79
ATG4D-201ENST00000309469 AFF3P51826 1226 aaKnown RBP19.97■□□□□ 0.79
ATG4D-201ENST00000309469 HMGA2P52926 109 aa19.97■□□□□ 0.79
ATG4D-201ENST00000309469 ISL1P61371 349 aa19.97■□□□□ 0.79
ATG4D-201ENST00000309469 EXOC3L2Q2M3D2 409 aa19.97■□□□□ 0.79
ATG4D-201ENST00000309469 C14orf28Q4W4Y0 310 aa19.97■□□□□ 0.79
ATG4D-201ENST00000309469 WDR45BQ5MNZ6 344 aa19.97■□□□□ 0.79
ATG4D-201ENST00000309469 C6orf132Q5T0Z8 1188 aa19.97■□□□□ 0.79
ATG4D-201ENST00000309469 FAM92BQ6ZTR7 304 aa19.97■□□□□ 0.79
ATG4D-201ENST00000309469 SHISA5Q8N114 240 aa19.97■□□□□ 0.79
ATG4D-201ENST00000309469 ARHGEF39Q8N4T4 335 aa19.97■□□□□ 0.79
ATG4D-201ENST00000309469 OR7G2Q8NG99 324 aa19.97■□□□□ 0.79
ATG4D-201ENST00000309469 ACTRT3Q9BYD9 372 aa19.97■□□□□ 0.79
ATG4D-201ENST00000309469 RBM38Q9H0Z9 239 aaKnown RBP19.97■□□□□ 0.79
ATG4D-201ENST00000309469 DDX18Q9NVP1 670 aaKnown RBP19.97■□□□□ 0.79
ATG4D-201ENST00000309469 KCNE3Q9Y6H6 103 aa19.97■□□□□ 0.79
ATG4D-201ENST00000309469 GOLGA4Q13439 2230 aaKnown RBP19.96■□□□□ 0.79
ATG4D-201ENST00000309469 SGK494L7N484 410 aa19.96■□□□□ 0.79
ATG4D-201ENST00000309469 ASNA1O43681 348 aa19.96■□□□□ 0.79
ATG4D-201ENST00000309469 ETS2P15036 469 aa19.96■□□□□ 0.79
ATG4D-201ENST00000309469 RYKP34925 604 aa19.96■□□□□ 0.79
ATG4D-201ENST00000309469 CLK3P49761 638 aaKnown RBP19.96■□□□□ 0.79
ATG4D-201ENST00000309469 SHC2P98077 582 aa19.96■□□□□ 0.79
ATG4D-201ENST00000309469 MICAQ29983 383 aa19.96■□□□□ 0.79
ATG4D-201ENST00000309469 BORAQ6PGQ7 559 aa19.96■□□□□ 0.79
ATG4D-201ENST00000309469 OLIG3Q7RTU3 272 aa19.96■□□□□ 0.79
ATG4D-201ENST00000309469 TTC29Q8NA56 475 aaPredicted RBP19.96■□□□□ 0.79
ATG4D-201ENST00000309469 OR10G2Q8NGC3 310 aa19.96■□□□□ 0.79
ATG4D-201ENST00000309469 SPATA5L1Q9BVQ7 753 aa19.96■□□□□ 0.79
ATG4D-201ENST00000309469 ANKHQ9HCJ1 492 aa19.96■□□□□ 0.79
ATG4D-201ENST00000309469 A0A0G2JPF8 293 aa19.96■□□□□ 0.79
ATG4D-201ENST00000309469 CCDC160A6NGH7 325 aa19.96■□□□□ 0.79
ATG4D-201ENST00000309469 HNRNPCL2B2RXH8 293 aa19.96■□□□□ 0.79
ATG4D-201ENST00000309469 HNRNPCL3B7ZW38 293 aa19.96■□□□□ 0.79
ATG4D-201ENST00000309469 HNRNPCL4P0DMR1 293 aa19.96■□□□□ 0.79
ATG4D-201ENST00000309469 CYP4B1P13584 511 aa19.96■□□□□ 0.79
ATG4D-201ENST00000309469 LIMS1P48059 325 aa19.96■□□□□ 0.79
ATG4D-201ENST00000309469 RPS6KA3P51812 740 aa19.96■□□□□ 0.79
ATG4D-201ENST00000309469 ID2Q02363 134 aa19.96■□□□□ 0.79
ATG4D-201ENST00000309469 MLLT1Q03111 559 aaPredicted RBP19.96■□□□□ 0.79
ATG4D-201ENST00000309469 CD47Q08722 323 aa19.96■□□□□ 0.79
ATG4D-201ENST00000309469 KEAP1Q14145 624 aa19.96■□□□□ 0.79
ATG4D-201ENST00000309469 MEP1AQ16819 746 aa19.96■□□□□ 0.79
ATG4D-201ENST00000309469 PRTGQ2VWP7 1150 aa19.96■□□□□ 0.79
ATG4D-201ENST00000309469 GPAT3Q53EU6 434 aa19.96■□□□□ 0.79
ATG4D-201ENST00000309469 RBM48Q5RL73 367 aaKnown RBP19.96■□□□□ 0.79
ATG4D-201ENST00000309469 PRAMEF8Q5VWM4 474 aa19.96■□□□□ 0.79
ATG4D-201ENST00000309469 PRAMEF7Q5VXH5 474 aa19.96■□□□□ 0.79
ATG4D-201ENST00000309469 SLC5A8Q8N695 610 aa19.96■□□□□ 0.79
ATG4D-201ENST00000309469 TMEM52Q8NDY8 209 aa19.96■□□□□ 0.79
ATG4D-201ENST00000309469 CHDHQ8NE62 594 aaPredicted RBP19.96■□□□□ 0.79
ATG4D-201ENST00000309469 ADAMTS16Q8TE57 1224 aa19.96■□□□□ 0.79
ATG4D-201ENST00000309469 HDAC2Q92769 488 aaKnown RBP19.96■□□□□ 0.79
ATG4D-201ENST00000309469 TANKQ92844 425 aa19.96■□□□□ 0.79
ATG4D-201ENST00000309469 FEVQ99581 238 aa19.96■□□□□ 0.79
ATG4D-201ENST00000309469 SCN3AQ9NY46 2000 aa19.95■□□□□ 0.78
ATG4D-201ENST00000309469 FAM227AF5H4B4 570 aa19.95■□□□□ 0.78
ATG4D-201ENST00000309469 FGF17O60258 216 aa19.95■□□□□ 0.78
ATG4D-201ENST00000309469 GADD45GO95257 159 aa19.95■□□□□ 0.78
ATG4D-201ENST00000309469 GPR75O95800 540 aa19.95■□□□□ 0.78
ATG4D-201ENST00000309469 PPM1FP49593 454 aaPredicted RBP19.95■□□□□ 0.78
ATG4D-201ENST00000309469 HLCSP50747 726 aa19.95■□□□□ 0.78
ATG4D-201ENST00000309469 RAPSNQ13702 412 aa19.95■□□□□ 0.78
ATG4D-201ENST00000309469 CTU2Q2VPK5 515 aaKnown RBP19.95■□□□□ 0.78
ATG4D-201ENST00000309469 C6orf141Q5SZD1 244 aa19.95■□□□□ 0.78
ATG4D-201ENST00000309469 FAM111BQ6SJ93 734 aa19.95■□□□□ 0.78
ATG4D-201ENST00000309469 OR2L13Q8N349 312 aa19.95■□□□□ 0.78
ATG4D-201ENST00000309469 NCSTNQ92542 709 aa19.95■□□□□ 0.78
ATG4D-201ENST00000309469 BTBD2Q9BX70 525 aa19.95■□□□□ 0.78
ATG4D-201ENST00000309469 PTGFRNQ9P2B2 879 aa19.95■□□□□ 0.78
ATG4D-201ENST00000309469 KCND3Q9UK17 655 aa19.95■□□□□ 0.78
ATG4D-201ENST00000309469 LIPT1Q9Y234 373 aa19.95■□□□□ 0.78
ATG4D-201ENST00000309469 LDB3O75112 727 aa19.94■□□□□ 0.78
ATG4D-201ENST00000309469 ANXA8P13928 327 aa19.94■□□□□ 0.78
ATG4D-201ENST00000309469 RAB38P57729 211 aa19.94■□□□□ 0.78
ATG4D-201ENST00000309469 GANABQ14697 944 aaKnown RBP19.94■□□□□ 0.78
ATG4D-201ENST00000309469 SETD9Q8NE22 299 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms