RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 C5orf34Q96MH7 638 aa10.21□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 ZNF681Q96N22 645 aa10.21□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 NPAS2Q99743 824 aa10.21□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 DPY30Q9C005 99 aa10.21□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 WWTR1Q9GZV5 400 aa10.21□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 OR10A5Q9H207 317 aa10.21□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 HPF1Q9NWY4 346 aa10.21□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 ANKRD10Q9NXR5 420 aa10.21□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 ASIC5Q9NY37 505 aa10.21□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 LRFN1Q9P244 771 aa10.21□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 MYOTQ9UBF9 498 aa10.21□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 PRODH2Q9UF12 536 aa10.21□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 ERVK-11Q9UQG0 969 aa10.21□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 CSAG2Q9Y5P2 127 aa10.21□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 USH1CQ9Y6N9 552 aa10.21□□□□□ -0.77
CSPG4P2Y-201ENST00000306853 MYO1GB0I1T2 1018 aa10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 SDHDO14521 159 aa10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 DYNC1I1O14576 645 aa10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 MAN1A2O60476 641 aa10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 TBX19O60806 448 aa10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 DIAPH2O60879 1101 aa10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 OR2J2O76002 312 aa10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 G6PDP11413 515 aa10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 PCSK2P16519 638 aa10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 EPHA3P29320 983 aa10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 PTGER1P34995 402 aa10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 TNFSF10P50591 281 aa10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 MANFP55145 182 aaKnown RBP10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 NRG3P56975 720 aa10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 MRPS35P82673 323 aaKnown RBP10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 DUSP2Q05923 314 aa10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 PDE7AQ13946 482 aa10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 EBPQ15125 230 aaKnown RBP10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 OR1C1Q15619 314 aa10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 ZNF628Q5EBL2 1059 aa10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 CPTPQ5TA50 214 aa10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 OGFOD2Q6N063 350 aa10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 FAM111BQ6SJ93 734 aa10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 OPN5Q6U736 354 aa10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 FAM47EQ6ZV65 393 aa10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 SZRD1Q7Z422 152 aa10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 SPATA19Q7Z5L4 167 aa10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 ZNF605Q86T29 641 aa10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 GPALPP1Q8IXQ4 340 aa10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 TAGAPQ8N103 731 aa10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 CYP4Z2PQ8N1L4 340 aa10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 ARMC10Q8N2F6 343 aa10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 NATD1Q8N6N6 113 aa10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 TMEM178AQ8NBL3 297 aa10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 FAM98AQ8NCA5 519 aaKnown RBP10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 CATSPER1Q8NEC5 780 aa10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 OR52R1Q8NGF1 315 aa10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 KAT2AQ92830 837 aa10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 ERP27Q96DN0 273 aa10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 RASL10BQ96S79 203 aa10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 GLIPR2Q9H4G4 154 aa10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 LIN28AQ9H9Z2 209 aaKnown RBP10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 SLCO1B3Q9NPD5 702 aa10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 RYDENQ9NUL5 291 aaKnown RBP10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 TAS2R7Q9NYW3 318 aa10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 ATP6V1HQ9UI12 483 aa10.2□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 NUP214P35658 2090 aaPredicted RBP10.19□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 ATMQ13315 3056 aa10.19□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 POLR3GO15318 223 aaPredicted RBP10.19□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 SUV39H1O43463 412 aa10.19□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 SLC25A12O75746 678 aa10.19□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 SORBS2O94875 1100 aaKnown RBP10.19□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 TRHRP34981 398 aaPredicted RBP10.19□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 CD96P40200 585 aa10.19□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 MC3RP41968 323 aa10.19□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 TMED10P49755 219 aaKnown RBP10.19□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 ST13P50502 369 aaKnown RBP10.19□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 HLCSP50747 726 aa10.19□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 CLNS1AP54105 237 aaKnown RBP10.19□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 DIO3P55073 304 aa10.19□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 CLDN8P56748 225 aa10.19□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 ZNF155Q12901 538 aaPredicted RBP10.19□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 EXOSC7Q15024 291 aaKnown RBP10.19□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 RPS6KA2Q15349 733 aa10.19□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 INAQ16352 499 aa10.19□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 MPEG1Q2M385 716 aa10.19□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 DPY19L1Q2PZI1 675 aa10.19□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 PLEKHN1Q494U1 663 aaPredicted RBP10.19□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 ZNF385BQ569K4 471 aa10.19□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 ZNF766Q5HY98 468 aa10.19□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 TMEM107Q6UX40 140 aa10.19□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 LARP4Q71RC2 724 aaKnown RBP eCLIP10.19□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 DND1Q8IYX4 353 aaKnown RBP10.19□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 SLC15A4Q8N697 577 aa10.19□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 OR7A2PQ8NGA2 310 aa10.19□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 CEP70Q8NHQ1 597 aa10.19□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 C16orf52Q8NHV5 167 aa10.19□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 CIDECQ96AQ7 238 aaPredicted RBP10.19□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 CTHRC1Q96CG8 243 aa10.19□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 AMDHD1Q96NU7 426 aa10.19□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 ZBTB18Q99592 522 aa10.19□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 EPN3Q9H201 632 aa10.19□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 WDR55Q9H6Y2 383 aaPredicted RBP10.19□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 DDX18Q9NVP1 670 aaKnown RBP10.19□□□□□ -0.78
CSPG4P2Y-201ENST00000306853 TAS2R9Q9NYW1 312 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms