RNA–Protein interactions for RNA: ENST00000302424.11

TRIM8-201, Transcript of tripartite motif containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM8, Length 2,831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-201ENST00000302424 PEX16Q9Y5Y5 336 aa16.99■□□□□ 0.31
TRIM8-201ENST00000302424 TRBV23OR9-2A0A075B6M9 112 aa16.98■□□□□ 0.31
TRIM8-201ENST00000302424 H3BQ06 376 aaPredicted RBP16.98■□□□□ 0.31
TRIM8-201ENST00000302424 COPZ1P61923 177 aa16.98■□□□□ 0.31
TRIM8-201ENST00000302424 ZNF45Q02386 682 aa16.98■□□□□ 0.31
TRIM8-201ENST00000302424 WSCD2Q2TBF2 565 aa16.98■□□□□ 0.31
TRIM8-201ENST00000302424 LCTLQ6UWM7 567 aa16.98■□□□□ 0.31
TRIM8-201ENST00000302424 TMEM107Q6UX40 140 aa16.98■□□□□ 0.31
TRIM8-201ENST00000302424 LINC00299Q6ZSB3 139 aa16.98■□□□□ 0.31
TRIM8-201ENST00000302424 ERN2Q76MJ5 926 aaKnown RBP16.98■□□□□ 0.31
TRIM8-201ENST00000302424 FBXO15Q8NCQ5 510 aaPredicted RBP16.98■□□□□ 0.31
TRIM8-201ENST00000302424 SIMC1Q8NDZ2 872 aa16.98■□□□□ 0.31
TRIM8-201ENST00000302424 SPPL3Q8TCT6 385 aa16.98■□□□□ 0.31
TRIM8-201ENST00000302424 OTULINQ96BN8 352 aa16.98■□□□□ 0.31
TRIM8-201ENST00000302424 TMEM80Q96HE8 168 aa16.98■□□□□ 0.31
TRIM8-201ENST00000302424 ZNF354BQ96LW1 612 aa16.98■□□□□ 0.31
TRIM8-201ENST00000302424 FNDC11Q9BVV2 318 aa16.98■□□□□ 0.31
TRIM8-201ENST00000302424 MMP28Q9H239 520 aa16.98■□□□□ 0.31
TRIM8-201ENST00000302424 C6orf106Q9H6K1 298 aaPredicted RBP16.98■□□□□ 0.31
TRIM8-201ENST00000302424 SMURF1Q9HCE7 757 aa16.98■□□□□ 0.31
TRIM8-201ENST00000302424 FZD3Q9NPG1 666 aa16.98■□□□□ 0.31
TRIM8-201ENST00000302424 TBC1D24Q9ULP9 559 aa16.98■□□□□ 0.31
TRIM8-201ENST00000302424 MAFFQ9ULX9 164 aa16.98■□□□□ 0.31
TRIM8-201ENST00000302424 GPR55Q9Y2T6 319 aaPredicted RBP16.98■□□□□ 0.31
TRIM8-201ENST00000302424 BOLA1Q9Y3E2 137 aa16.98■□□□□ 0.31
TRIM8-201ENST00000302424 MDC1Q14676 2089 aaKnown RBP16.98■□□□□ 0.31
TRIM8-201ENST00000302424 SYNDIG1LA6NDD5 238 aa16.98■□□□□ 0.31
TRIM8-201ENST00000302424 PDZK1P1A8MUH7 402 aa16.98■□□□□ 0.31
TRIM8-201ENST00000302424 KIAA0355O15063 1070 aa16.98■□□□□ 0.31
TRIM8-201ENST00000302424 ASNA1O43681 348 aa16.98■□□□□ 0.31
TRIM8-201ENST00000302424 SNX4O95219 450 aa16.98■□□□□ 0.31
TRIM8-201ENST00000302424 TP53P04637 393 aaPredicted RBP16.98■□□□□ 0.31
TRIM8-201ENST00000302424 CHRM4P08173 479 aa16.98■□□□□ 0.31
TRIM8-201ENST00000302424 SRPRAP08240 638 aaKnown RBP16.98■□□□□ 0.31
TRIM8-201ENST00000302424 CRYBB2P43320 205 aa16.98■□□□□ 0.31
TRIM8-201ENST00000302424 SLC15A1P46059 708 aa16.98■□□□□ 0.31
TRIM8-201ENST00000302424 CCR8P51685 355 aa16.98■□□□□ 0.31
TRIM8-201ENST00000302424 PCBP4P57723 403 aaKnown RBP16.98■□□□□ 0.31
TRIM8-201ENST00000302424 LRIG1Q96JA1 1093 aa16.98■□□□□ 0.31
TRIM8-201ENST00000302424 TAPBPLQ9BX59 468 aa16.98■□□□□ 0.31
TRIM8-201ENST00000302424 BEX2Q9BXY8 128 aa16.98■□□□□ 0.31
TRIM8-201ENST00000302424 DPEP2Q9H4A9 486 aa16.98■□□□□ 0.31
TRIM8-201ENST00000302424 SP140LQ9H930 580 aa16.98■□□□□ 0.31
TRIM8-201ENST00000302424 CPNE5Q9HCH3 593 aa16.98■□□□□ 0.31
TRIM8-201ENST00000302424 ABCB9Q9NP78 766 aa16.98■□□□□ 0.31
TRIM8-201ENST00000302424 DSPPQ9NZW4 1301 aa16.98■□□□□ 0.31
TRIM8-201ENST00000302424 TCEA1P23193 301 aaKnown RBP16.97■□□□□ 0.31
TRIM8-201ENST00000302424 MAT2AP31153 395 aaKnown RBP16.97■□□□□ 0.31
TRIM8-201ENST00000302424 CASP3P42574 277 aa16.97■□□□□ 0.31
TRIM8-201ENST00000302424 PCYT1AP49585 367 aa16.97■□□□□ 0.31
TRIM8-201ENST00000302424 CLDN2P57739 230 aa16.97■□□□□ 0.31
TRIM8-201ENST00000302424 PRKCDQ05655 676 aa16.97■□□□□ 0.31
TRIM8-201ENST00000302424 MLF2Q15773 248 aaPredicted RBP16.97■□□□□ 0.31
TRIM8-201ENST00000302424 SNAPC1Q16533 368 aa16.97■□□□□ 0.31
TRIM8-201ENST00000302424 RSBN1Q5VWQ0 802 aaPredicted RBP16.97■□□□□ 0.31
TRIM8-201ENST00000302424 CCDC190Q86UF4 302 aa16.97■□□□□ 0.31
TRIM8-201ENST00000302424 OR5K2Q8NHB8 316 aa16.97■□□□□ 0.31
TRIM8-201ENST00000302424 UBE2E3Q969T4 207 aa16.97■□□□□ 0.31
TRIM8-201ENST00000302424 ITPKCQ96DU7 683 aa16.97■□□□□ 0.31
TRIM8-201ENST00000302424 MTERF3Q96E29 417 aa16.97■□□□□ 0.31
TRIM8-201ENST00000302424 SLC35G5Q96KT7 338 aa16.97■□□□□ 0.31
TRIM8-201ENST00000302424 RACGAP1Q9H0H5 632 aa16.97■□□□□ 0.31
TRIM8-201ENST00000302424 EPHX3Q9H6B9 360 aa16.97■□□□□ 0.31
TRIM8-201ENST00000302424 CCDC59Q9P031 241 aaKnown RBP16.97■□□□□ 0.31
TRIM8-201ENST00000302424 ICKQ9UPZ9 632 aa16.97■□□□□ 0.31
TRIM8-201ENST00000302424 ATG4BQ9Y4P1 393 aa16.97■□□□□ 0.31
TRIM8-201ENST00000302424 SPIN1Q9Y657 262 aaPredicted RBP16.97■□□□□ 0.31
TRIM8-201ENST00000302424 CPSF4LA6NMK7 179 aaKnown RBP16.97■□□□□ 0.31
TRIM8-201ENST00000302424 ADAP00813 363 aa16.97■□□□□ 0.31
TRIM8-201ENST00000302424 CSF2P04141 144 aa16.97■□□□□ 0.31
TRIM8-201ENST00000302424 HMGN2P05204 90 aaKnown RBP16.97■□□□□ 0.31
TRIM8-201ENST00000302424 CSTF2P33240 577 aaKnown RBP eCLIP16.97■□□□□ 0.31
TRIM8-201ENST00000302424 GSTM5P46439 218 aa16.97■□□□□ 0.31
TRIM8-201ENST00000302424 CDK3Q00526 305 aa16.97■□□□□ 0.31
TRIM8-201ENST00000302424 ALDH6A1Q02252 535 aaKnown RBP16.97■□□□□ 0.31
TRIM8-201ENST00000302424 ILKQ13418 452 aa16.97■□□□□ 0.31
TRIM8-201ENST00000302424 ELAVL3Q14576 367 aaKnown RBP16.97■□□□□ 0.31
TRIM8-201ENST00000302424 C6orf183Q5T699 404 aa16.97■□□□□ 0.31
TRIM8-201ENST00000302424 UNC5DQ6UXZ4 953 aa16.97■□□□□ 0.31
TRIM8-201ENST00000302424 LHFPL3Q86UP9 236 aa16.97■□□□□ 0.31
TRIM8-201ENST00000302424 SETD7Q8WTS6 366 aaKnown RBP16.97■□□□□ 0.31
TRIM8-201ENST00000302424 ASB15Q8WXK1 588 aa16.97■□□□□ 0.31
TRIM8-201ENST00000302424 KAT2AQ92830 837 aa16.97■□□□□ 0.31
TRIM8-201ENST00000302424 SLC35B4Q969S0 331 aa16.97■□□□□ 0.31
TRIM8-201ENST00000302424 BBS4Q96RK4 519 aa16.97■□□□□ 0.31
TRIM8-201ENST00000302424 INSM2Q96T92 566 aaPredicted RBP16.97■□□□□ 0.31
TRIM8-201ENST00000302424 MARK1Q9P0L2 795 aa16.97■□□□□ 0.31
TRIM8-201ENST00000302424 LSM2Q9Y333 95 aaKnown RBP16.97■□□□□ 0.31
TRIM8-201ENST00000302424 SAGE2PA6NJ88 616 aa16.97■□□□□ 0.31
TRIM8-201ENST00000302424 MYL12BO14950 172 aa16.97■□□□□ 0.31
TRIM8-201ENST00000302424 MID1O15344 667 aa16.97■□□□□ 0.31
TRIM8-201ENST00000302424 ERI3O43414 337 aaKnown RBP16.97■□□□□ 0.31
TRIM8-201ENST00000302424 CCNKO75909 580 aa16.97■□□□□ 0.31
TRIM8-201ENST00000302424 SCG5P05408 212 aa16.97■□□□□ 0.31
TRIM8-201ENST00000302424 FAM78AQ5JUQ0 283 aa16.97■□□□□ 0.31
TRIM8-201ENST00000302424 LRRTM4Q86VH4 590 aa16.97■□□□□ 0.31
TRIM8-201ENST00000302424 NUDT13Q86X67 352 aa16.97■□□□□ 0.31
TRIM8-201ENST00000302424 NLGN4YQ8NFZ3 816 aaPredicted RBP16.97■□□□□ 0.31
TRIM8-201ENST00000302424 SLC6A17Q9H1V8 727 aa16.97■□□□□ 0.31
TRIM8-201ENST00000302424 A4GALTQ9NPC4 353 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms