RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 XCR1P46094 333 aa20.92■□□□□ 0.94
SMAD1-201ENST00000302085 RAB38P57729 211 aa20.92■□□□□ 0.94
SMAD1-201ENST00000302085 EPS8Q12929 822 aa20.92■□□□□ 0.94
SMAD1-201ENST00000302085 TTC23Q5W5X9 447 aa20.92■□□□□ 0.94
SMAD1-201ENST00000302085 KDM4DQ6B0I6 523 aa20.92■□□□□ 0.94
SMAD1-201ENST00000302085 TTC33Q6PID6 262 aaPredicted RBP20.92■□□□□ 0.94
SMAD1-201ENST00000302085 FAM111BQ6SJ93 734 aa20.92■□□□□ 0.94
SMAD1-201ENST00000302085 SLC35F3Q8IY50 421 aa20.92■□□□□ 0.94
SMAD1-201ENST00000302085 LGI4Q8N135 537 aa20.92■□□□□ 0.94
SMAD1-201ENST00000302085 COL21A1Q96P44 957 aa20.92■□□□□ 0.94
SMAD1-201ENST00000302085 BCL2L10Q9HD36 194 aa20.92■□□□□ 0.94
SMAD1-201ENST00000302085 PRMT8Q9NR22 394 aaPredicted RBP20.92■□□□□ 0.94
SMAD1-201ENST00000302085 PLCL2Q9UPR0 1127 aa20.92■□□□□ 0.94
SMAD1-201ENST00000302085 ENPP4Q9Y6X5 453 aa20.92■□□□□ 0.94
SMAD1-201ENST00000302085 A0A0A6YYC8 382 aaPredicted RBP20.91■□□□□ 0.94
SMAD1-201ENST00000302085 I3L1I5 382 aaPredicted RBP20.91■□□□□ 0.94
SMAD1-201ENST00000302085 FOXS1O43638 330 aa20.91■□□□□ 0.94
SMAD1-201ENST00000302085 MYF5P13349 255 aa20.91■□□□□ 0.94
SMAD1-201ENST00000302085 POLR2IP36954 125 aaKnown RBP20.91■□□□□ 0.94
SMAD1-201ENST00000302085 KCNJ5P48544 419 aa20.91■□□□□ 0.94
SMAD1-201ENST00000302085 APOFQ13790 326 aa20.91■□□□□ 0.94
SMAD1-201ENST00000302085 RNF220Q5VTB9 566 aa20.91■□□□□ 0.94
SMAD1-201ENST00000302085 GALNT5Q7Z7M9 940 aa20.91■□□□□ 0.94
SMAD1-201ENST00000302085 OR2L13Q8N349 312 aa20.91■□□□□ 0.94
SMAD1-201ENST00000302085 ZNF555Q8NEP9 628 aa20.91■□□□□ 0.94
SMAD1-201ENST00000302085 OR4C15Q8NGM1 316 aa20.91■□□□□ 0.94
SMAD1-201ENST00000302085 TANKQ92844 425 aa20.91■□□□□ 0.94
SMAD1-201ENST00000302085 ANKRD9Q96BM1 317 aaPredicted RBP20.91■□□□□ 0.94
SMAD1-201ENST00000302085 ZDHHC12Q96GR4 267 aa20.91■□□□□ 0.94
SMAD1-201ENST00000302085 ELF4Q99607 663 aaPredicted RBP20.91■□□□□ 0.94
SMAD1-201ENST00000302085 ACTRT3Q9BYD9 372 aa20.91■□□□□ 0.94
SMAD1-201ENST00000302085 EXD2Q9NVH0 621 aa20.91■□□□□ 0.94
SMAD1-201ENST00000302085 KLHL3Q9UH77 587 aa20.91■□□□□ 0.94
SMAD1-201ENST00000302085 C3orf18Q9UK00 162 aa20.91■□□□□ 0.94
SMAD1-201ENST00000302085 TNFRSF11BO00300 401 aa20.9■□□□□ 0.94
SMAD1-201ENST00000302085 ADAMDEC1O15204 470 aa20.9■□□□□ 0.94
SMAD1-201ENST00000302085 NUDT21O43809 227 aaKnown RBP20.9■□□□□ 0.94
SMAD1-201ENST00000302085 DNAJB5O75953 348 aa20.9■□□□□ 0.94
SMAD1-201ENST00000302085 IGFBP5P24593 272 aa20.9■□□□□ 0.94
SMAD1-201ENST00000302085 PPP2R1BP30154 601 aa20.9■□□□□ 0.94
SMAD1-201ENST00000302085 MLLT3P42568 568 aaPredicted RBP20.9■□□□□ 0.94
SMAD1-201ENST00000302085 RFX4Q33E94 735 aa20.9■□□□□ 0.94
SMAD1-201ENST00000302085 ZNF628Q5EBL2 1059 aa20.9■□□□□ 0.94
SMAD1-201ENST00000302085 FAHD1Q6P587 224 aa20.9■□□□□ 0.94
SMAD1-201ENST00000302085 ZNF786Q8N393 782 aa20.9■□□□□ 0.94
SMAD1-201ENST00000302085 DOK4Q8TEW6 326 aa20.9■□□□□ 0.94
SMAD1-201ENST00000302085 SLC35A4Q96G79 324 aa20.9■□□□□ 0.94
SMAD1-201ENST00000302085 PIP5K1AQ99755 562 aa20.9■□□□□ 0.94
SMAD1-201ENST00000302085 MRPS26Q9BYN8 205 aaKnown RBP20.9■□□□□ 0.94
SMAD1-201ENST00000302085 CLK4Q9HAZ1 481 aaKnown RBP20.9■□□□□ 0.94
SMAD1-201ENST00000302085 DDX18Q9NVP1 670 aaKnown RBP20.9■□□□□ 0.94
SMAD1-201ENST00000302085 DNAAF2Q9NVR5 837 aaKnown RBP20.9■□□□□ 0.94
SMAD1-201ENST00000302085 IGHV1OR21-1A0A087WYE8 117 aa20.9■□□□□ 0.94
SMAD1-201ENST00000302085 B4GAT1O43505 415 aa20.9■□□□□ 0.94
SMAD1-201ENST00000302085 SERPINB7O75635 380 aa20.9■□□□□ 0.94
SMAD1-201ENST00000302085 CRISP3P54108 245 aa20.9■□□□□ 0.94
SMAD1-201ENST00000302085 RAD23AP54725 363 aa20.9■□□□□ 0.94
SMAD1-201ENST00000302085 CFHR1Q03591 330 aa20.9■□□□□ 0.94
SMAD1-201ENST00000302085 KCNC4Q03721 635 aa20.9■□□□□ 0.94
SMAD1-201ENST00000302085 TRMT12Q53H54 448 aaKnown RBP20.9■□□□□ 0.94
SMAD1-201ENST00000302085 FHL5Q5TD97 284 aa20.9■□□□□ 0.94
SMAD1-201ENST00000302085 FOXB2Q5VYV0 432 aa20.9■□□□□ 0.94
SMAD1-201ENST00000302085 PMS2CLQ68D20 193 aa20.9■□□□□ 0.94
SMAD1-201ENST00000302085 WDR53Q7Z5U6 358 aaPredicted RBP20.9■□□□□ 0.94
SMAD1-201ENST00000302085 TTC29Q8NA56 475 aaPredicted RBP20.9■□□□□ 0.94
SMAD1-201ENST00000302085 TSPAN14Q8NG11 270 aa20.9■□□□□ 0.94
SMAD1-201ENST00000302085 BBS10Q8TAM1 723 aa20.9■□□□□ 0.94
SMAD1-201ENST00000302085 CHRNA10Q9GZZ6 450 aa20.9■□□□□ 0.94
SMAD1-201ENST00000302085 PDE7BQ9NP56 450 aa20.9■□□□□ 0.94
SMAD1-201ENST00000302085 SOHLH2Q9NX45 425 aa20.9■□□□□ 0.94
SMAD1-201ENST00000302085 CLCA2Q9UQC9 943 aa20.9■□□□□ 0.94
SMAD1-201ENST00000302085 ORC6Q9Y5N6 252 aa20.9■□□□□ 0.94
SMAD1-201ENST00000302085 ASNA1O43681 348 aa20.89■□□□□ 0.93
SMAD1-201ENST00000302085 IFNW1P05000 195 aa20.89■□□□□ 0.93
SMAD1-201ENST00000302085 ATP1B1P05026 303 aa20.89■□□□□ 0.93
SMAD1-201ENST00000302085 TFAP2AP05549 437 aa20.89■□□□□ 0.93
SMAD1-201ENST00000302085 ATP6V1B1P15313 513 aa20.89■□□□□ 0.93
SMAD1-201ENST00000302085 FUT4P22083 530 aa20.89■□□□□ 0.93
SMAD1-201ENST00000302085 SPIBQ01892 262 aa20.89■□□□□ 0.93
SMAD1-201ENST00000302085 SIGLEC14Q08ET2 396 aa20.89■□□□□ 0.93
SMAD1-201ENST00000302085 MFSD12Q6NUT3 480 aa20.89■□□□□ 0.93
SMAD1-201ENST00000302085 OR52J3Q8NH60 311 aa20.89■□□□□ 0.93
SMAD1-201ENST00000302085 PROX1Q92786 737 aa20.89■□□□□ 0.93
SMAD1-201ENST00000302085 CD180Q99467 661 aa20.89■□□□□ 0.93
SMAD1-201ENST00000302085 SPRTNQ9H040 489 aaPredicted RBP20.89■□□□□ 0.93
SMAD1-201ENST00000302085 ACER3Q9NUN7 267 aa20.89■□□□□ 0.93
SMAD1-201ENST00000302085 PTGFRNQ9P2B2 879 aa20.89■□□□□ 0.93
SMAD1-201ENST00000302085 SEC14L3Q9UDX4 400 aa20.89■□□□□ 0.93
SMAD1-201ENST00000302085 HYKKA2RU49 373 aa20.88■□□□□ 0.93
SMAD1-201ENST00000302085 CLPTM1O96005 669 aa20.88■□□□□ 0.93
SMAD1-201ENST00000302085 CDH12P55289 794 aa20.88■□□□□ 0.93
SMAD1-201ENST00000302085 GNA13Q14344 377 aa20.88■□□□□ 0.93
SMAD1-201ENST00000302085 NDUFA9Q16795 377 aa20.88■□□□□ 0.93
SMAD1-201ENST00000302085 GPAT3Q53EU6 434 aa20.88■□□□□ 0.93
SMAD1-201ENST00000302085 ZNF605Q86T29 641 aa20.88■□□□□ 0.93
SMAD1-201ENST00000302085 COMTD1Q86VU5 262 aa20.88■□□□□ 0.93
SMAD1-201ENST00000302085 KRT73Q86Y46 540 aa20.88■□□□□ 0.93
SMAD1-201ENST00000302085 APLFQ8IW19 511 aaPredicted RBP20.88■□□□□ 0.93
SMAD1-201ENST00000302085 MAML2Q8IZL2 1156 aaPredicted RBP20.88■□□□□ 0.93
SMAD1-201ENST00000302085 PIK3C3Q8NEB9 887 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms