RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 FNIP2Q9P278 1114 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 ICKQ9UPZ9 632 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 ANKRD26Q9UPS8 1709 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 BOLA2-SMG1P6H3BVE0 249 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 PPP1R3DO95685 299 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 NTHL1P78549 312 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 ZNF791Q3KP31 576 aaPredicted RBP12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 TMPPEQ6ZT21 453 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 ZDHHC14Q8IZN3 488 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 NPWQ8N729 165 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 CHST14Q8NCH0 376 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 APIPQ96GX9 242 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 NEDD4LQ96PU5 975 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 ZNF442Q9H7R0 627 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 SYNPO2LQ9H987 977 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 FAM118AQ9NWS6 357 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 COQ3Q9NZJ6 369 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 MEIS3P2A8K0S8 358 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 F5H0A9 414 aaPredicted RBP12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 GOSR2O14653 212 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 FMO6PO60774 539 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 EPHA1P21709 976 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 RTP2Q5QGT7 225 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 WDR53Q7Z5U6 358 aaPredicted RBP12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 TRAPPC6BQ86SZ2 158 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 FOXN4Q96NZ1 517 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 STRADBQ9C0K7 418 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 NKX2-4Q9H2Z4 354 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 DNMT3AQ9Y6K1 912 aaPredicted RBP12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 MED1Q15648 1581 aaPredicted RBP12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 MEIS3P1A6NDR6 274 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 A6NL46 340 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 H7C417 338 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 IFNA2P01563 188 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 H2AFB2P0C5Z0 115 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 ANXA3P12429 323 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 SOX3P41225 446 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 PRMT2P55345 433 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 OR8J3Q8NGG0 315 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 C1orf74Q96LT6 269 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 NECAB3Q96P71 396 aaPredicted RBP12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 CWH43Q9H720 699 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 PRODH2Q9UF12 536 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 C12orf71A8MTZ7 269 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 PCSK2P16519 638 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 ITGB8P26012 769 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 FRKP42685 505 aaPredicted RBP12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 HNRNPKP61978 463 aaKnown RBP eCLIP12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 COL28A1Q2UY09 1125 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 KIAA1143Q96AT1 154 aaPredicted RBP12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 C16orf70Q9BSU1 422 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 Q9Y3F1 56 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 AGAP5A6NIR3 686 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 EEDO75530 441 aaKnown RBP12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 ATE1O95260 518 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 BPIP17213 487 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 SMAD2Q15796 467 aaKnown RBP12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 GPR157Q5UAW9 335 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 FAM205BPQ63HN1 556 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 ATG9BQ674R7 924 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 DPY19L4Q7Z388 723 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 HAPLN2Q9GZV7 340 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 XYLT2Q9H1B5 865 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 POPDC3Q9HBV1 291 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 NETO1Q8TDF5 533 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 SLC2A13Q96QE2 648 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 TMEM246Q9BRR3 403 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 MAF1Q9H063 256 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 RANBP3Q9H6Z4 567 aaPredicted RBP12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 PDE7BQ9NP56 450 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 ARMC1Q9NVT9 282 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 MAB21L2Q9Y586 359 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 JUPP14923 745 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 SH3BP2P78314 561 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 DHCR24Q15392 516 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 GTDC1Q4AE62 458 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 C6orf141Q5SZD1 244 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 EEF1A1P5Q5VTE0 462 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 ZNF551Q7Z340 670 aaPredicted RBP12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 OR9Q2Q8NGE9 314 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 FRS2Q8WU20 508 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 MOAP1Q96BY2 351 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 FAM83CQ9BQN1 747 aa12.94□□□□□ -0.34
CHRFAM7A-201ENST00000299847 SOCS5O75159 536 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 NPPAP01160 153 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 CLCA4Q14CN2 919 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 AWAT2Q6E213 333 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 TMEM25Q86YD3 366 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 TMEM234Q8WY98 164 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 UBQLN2Q9UHD9 624 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 MPC1LP0DKB6 136 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 MAOBP27338 520 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 CRISP1P54107 249 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 NCS1P62166 190 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 GNMTQ14749 295 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 C15orf40Q8WUR7 153 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 ZNF296Q8WUU4 475 aaPredicted RBP12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 DIO2Q92813 273 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 SGTBQ96EQ0 304 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 MAELQ96JY0 434 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms