RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 ABCB9Q9NP78 766 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 SLAMF7Q9NQ25 335 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 PLD2O14939 933 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 LILRB3O75022 631 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 OR2B3O76000 313 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 FCER2P06734 321 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 PTX3P26022 381 aaPredicted RBP12.75□□□□□ -0.37
CTDP1-202ENST00000299543 SSTR4P31391 388 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 WASP42768 502 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 DHCR24Q15392 516 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 LILRA6Q6PI73 481 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 C6orf120Q7Z4R8 191 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 KRT78Q8N1N4 520 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 RIT1Q92963 219 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 MTERF3Q96E29 417 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 DTD2Q96FN9 168 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 POLR2J3Q9H1A7 115 aaKnown RBP12.75□□□□□ -0.37
CTDP1-202ENST00000299543 PLXNB3Q9ULL4 1909 aa12.74□□□□□ -0.37
CTDP1-202ENST00000299543 ABHD14A-ACY1A0A1B0GW23 586 aa12.74□□□□□ -0.37
CTDP1-202ENST00000299543 M0R3H8 397 aa12.74□□□□□ -0.37
CTDP1-202ENST00000299543 PI15O43692 258 aa12.74□□□□□ -0.37
CTDP1-202ENST00000299543 OR1F1O43749 312 aa12.74□□□□□ -0.37
CTDP1-202ENST00000299543 TLX2O43763 284 aaPredicted RBP12.74□□□□□ -0.37
CTDP1-202ENST00000299543 PRKRAO75569 313 aaKnown RBP12.74□□□□□ -0.37
CTDP1-202ENST00000299543 OR12D1P0DN82 309 aa12.74□□□□□ -0.37
CTDP1-202ENST00000299543 ARAFP10398 606 aa12.74□□□□□ -0.37
CTDP1-202ENST00000299543 CCL5P13501 91 aa12.74□□□□□ -0.37
CTDP1-202ENST00000299543 RHCEP18577 417 aa12.74□□□□□ -0.37
CTDP1-202ENST00000299543 IRS1P35568 1242 aa12.74□□□□□ -0.37
CTDP1-202ENST00000299543 SLC6A11P48066 632 aa12.74□□□□□ -0.37
CTDP1-202ENST00000299543 UGT2B15P54855 530 aa12.74□□□□□ -0.37
CTDP1-202ENST00000299543 LSM11P83369 360 aaKnown RBP eCLIP12.74□□□□□ -0.37
CTDP1-202ENST00000299543 SEC23BQ15437 767 aa12.74□□□□□ -0.37
CTDP1-202ENST00000299543 WDR53Q7Z5U6 358 aaPredicted RBP12.74□□□□□ -0.37
CTDP1-202ENST00000299543 ZNF547Q8IVP9 402 aa12.74□□□□□ -0.37
CTDP1-202ENST00000299543 GALNT11Q8NCW6 608 aa12.74□□□□□ -0.37
CTDP1-202ENST00000299543 KLK6Q92876 244 aa12.74□□□□□ -0.37
CTDP1-202ENST00000299543 NXPE3Q969Y0 559 aa12.74□□□□□ -0.37
CTDP1-202ENST00000299543 SIGLEC11Q96RL6 698 aa12.74□□□□□ -0.37
CTDP1-202ENST00000299543 TM9SF2Q99805 663 aa12.74□□□□□ -0.37
CTDP1-202ENST00000299543 AIFM2Q9BRQ8 373 aa12.74□□□□□ -0.37
CTDP1-202ENST00000299543 PRR14Q9BWN1 585 aa12.74□□□□□ -0.37
CTDP1-202ENST00000299543 XIRP2A4UGR9 3374 aa12.74□□□□□ -0.37
CTDP1-202ENST00000299543 ANHXE9PGG2 379 aa12.74□□□□□ -0.37
CTDP1-202ENST00000299543 RFXAPO00287 272 aa12.74□□□□□ -0.37
CTDP1-202ENST00000299543 PLPP1O14494 284 aa12.74□□□□□ -0.37
CTDP1-202ENST00000299543 FFAR1O14842 300 aa12.74□□□□□ -0.37
CTDP1-202ENST00000299543 CAPN5O15484 640 aaPredicted RBP12.74□□□□□ -0.37
CTDP1-202ENST00000299543 PCCBP05166 539 aa12.74□□□□□ -0.37
CTDP1-202ENST00000299543 NR2F1P10589 423 aa12.74□□□□□ -0.37
CTDP1-202ENST00000299543 OLR1P78380 273 aa12.74□□□□□ -0.37
CTDP1-202ENST00000299543 SYPL1Q16563 259 aa12.74□□□□□ -0.37
CTDP1-202ENST00000299543 CAMKMTQ7Z624 323 aa12.74□□□□□ -0.37
CTDP1-202ENST00000299543 PLA2G15Q8NCC3 412 aa12.74□□□□□ -0.37
CTDP1-202ENST00000299543 METTL2AQ96IZ6 378 aaKnown RBP12.74□□□□□ -0.37
CTDP1-202ENST00000299543 ASPNQ9BXN1 380 aa12.74□□□□□ -0.37
CTDP1-202ENST00000299543 POLR2J2Q9GZM3 115 aaKnown RBP12.74□□□□□ -0.37
CTDP1-202ENST00000299543 XKR8Q9H6D3 395 aa12.74□□□□□ -0.37
CTDP1-202ENST00000299543 AHSPQ9NZD4 102 aa12.74□□□□□ -0.37
CTDP1-202ENST00000299543 A0A0C4DFX4 3053 aa12.74□□□□□ -0.37
CTDP1-202ENST00000299543 PDPK1O15530 556 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 EPCAMP16422 314 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 XKP51811 444 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 TAGLNQ01995 201 aaKnown RBP12.73□□□□□ -0.37
CTDP1-202ENST00000299543 LIPKQ5VXJ0 399 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 FAM46DQ8NEK8 389 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 LILRB1Q8NHL6 650 aaPredicted RBP12.73□□□□□ -0.37
CTDP1-202ENST00000299543 RAD51AP1Q96B01 352 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 CDCP1Q9H5V8 836 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 RC3H2Q9HBD1 1191 aaKnown RBP12.73□□□□□ -0.37
CTDP1-202ENST00000299543 MYNNQ9NPC7 610 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 PLCXD1Q9NUJ7 323 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 GLTPQ9NZD2 209 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 MALT1Q9UDY8 824 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 MRPS23Q9Y3D9 190 aaKnown RBP12.73□□□□□ -0.37
CTDP1-202ENST00000299543 PRRT4C9JH25 899 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 FOXE1O00358 373 aaPredicted RBP12.73□□□□□ -0.37
CTDP1-202ENST00000299543 MRPS14O60783 128 aaKnown RBP12.73□□□□□ -0.37
CTDP1-202ENST00000299543 GPX5O75715 221 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 UQCRC2P22695 453 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 RPL3P39023 403 aaKnown RBP12.73□□□□□ -0.37
CTDP1-202ENST00000299543 BUD31P41223 144 aaPredicted RBP12.73□□□□□ -0.37
CTDP1-202ENST00000299543 RHAGQ02094 409 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 DOC2BQ14184 412 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 POU4F3Q15319 338 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 FBXO43Q4G163 708 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 ESCO2Q56NI9 601 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 IGSF11Q5DX21 431 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 TMEM65Q6PI78 240 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 SLC9B2Q86UD5 537 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.73□□□□□ -0.374e-6■■■■□ 20.6
CTDP1-202ENST00000299543 ARRDC3Q96B67 414 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 LRRC3BQ96PB8 259 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 SLC23A2Q9UGH3 650 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 SNX7Q9UNH6 387 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 PEX16Q9Y5Y5 336 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 CLCA3PQ9Y6N3 262 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 MOSPD3O75425 235 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 B3GALNT1O75752 331 aa12.73□□□□□ -0.37
CTDP1-202ENST00000299543 KLHL18O94889 574 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms