RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 RNF32Q9H0A6 362 aa12.81□□□□□ -0.36
RPUSD4-201ENST00000298317 UTRNP46939 3433 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 E7EQ34 232 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 H0YC42 278 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 GFYI3L273 518 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 KHNYNO15037 678 aaKnown RBP12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 LANCL1O43813 399 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 SLC11A2P49281 568 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 RHOAP61586 193 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 EFNB1P98172 346 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 B4GALNT1Q00973 533 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 BEX3Q00994 111 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 UBE3AQ05086 875 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 RAB40BQ12829 278 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 DOC2AQ14183 400 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 ADNP2Q6IQ32 1131 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 GRHL2Q6ISB3 625 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 TMEM91Q6ZNR0 172 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 RTL4Q6ZR62 310 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 VRK3Q8IV63 474 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 SLC30A8Q8IWU4 369 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 ZNF485Q8NCK3 441 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 OR8K5Q8NH50 307 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 SKA2Q8WVK7 121 aaPredicted RBP12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 KLHL15Q96M94 604 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 HDHD2Q9H0R4 259 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 REEP4Q9H6H4 257 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 FANCFQ9NPI8 374 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 LYARQ9NX58 379 aaKnown RBP12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 KCMF1Q9P0J7 381 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 GULP1Q9UBP9 304 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 A0A0B4J203 849 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 SH3BP5O60239 455 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 B4GALT3O60512 393 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 MPC1LP0DKB6 136 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 TFPIP10646 304 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 ACP2P11117 423 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 ZNF8P17098 575 aaPredicted RBP12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 ELK1P19419 428 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 CXCL3P19876 107 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 AP1S2P56377 157 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 CSTF1Q05048 431 aaKnown RBP12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 TCTN3Q6NUS6 607 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 FIP1L1Q6UN15 594 aaKnown RBP12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 LUZP2Q86TE4 346 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 OR6C4Q8NGE1 309 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 OR5AK3PQ8NH89 298 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 OR2M2Q96R28 347 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 SECISBP2Q96T21 854 aaKnown RBP12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 FUZQ9BT04 418 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 ABCG5Q9H222 651 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 SEMA3GQ9NS98 782 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 EXTL2Q9UBQ6 330 aa12.8□□□□□ -0.36
RPUSD4-201ENST00000298317 A0A0U1RQF3 1178 aa12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 GNG14A0A1W2PPG7 69 aa12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 IRGMA1A4Y4 181 aa12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 LINC01387J3KSC0 135 aa12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 SLC16A5O15375 505 aa12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 SRPRAP08240 638 aaKnown RBP12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 ZP3P21754 424 aa12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 CHI3L1P36222 383 aaPredicted RBP12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 GJA5P36382 358 aa12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 CCT3P49368 545 aaKnown RBP12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 DGKGP49619 791 aa12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 ZNF81P51508 661 aa12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 MAP2K6P52564 334 aa12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 PUDPQ08623 228 aa12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 CAMK2DQ13557 499 aa12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 MPEG1Q2M385 716 aa12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 TPGS1Q6ZTW0 290 aa12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 CBARPQ8N350 705 aaPredicted RBP12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 ZFP41Q8N8Y5 198 aa12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 ZBTB44Q8NCP5 570 aa12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 GPR156Q8NFN8 814 aa12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 CEP76Q8TAP6 659 aa12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 NEIL3Q8TAT5 605 aa12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 RFT1Q96AA3 541 aa12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 CIDECQ96AQ7 238 aaPredicted RBP12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 OTULINQ96BN8 352 aa12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 OR51J1Q9H342 316 aa12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 NMRK2Q9NPI5 230 aa12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 NUDT15Q9NV35 164 aa12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 ZDHHC3Q9NYG2 299 aa12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 FCF1Q9Y324 198 aaKnown RBP12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 TUBAL3A6NHL2 446 aa12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 GPR37L1O60883 481 aa12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 SH3BGRLO75368 114 aa12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 OR5F1O95221 314 aa12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 APOL3O95236 402 aa12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 CELF2O95319 508 aaKnown RBP12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 CFDP00746 253 aaPredicted RBP12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 H1F0P07305 194 aaKnown RBP12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 LIMS3P0CW19 117 aa12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 LIMS4P0CW20 117 aa12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 CCND3P30281 292 aaPredicted RBP12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 SOX18P35713 384 aa12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 CD79BP40259 229 aa12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 ACLYP53396 1101 aa12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 PTPN5P54829 565 aa12.79□□□□□ -0.36
RPUSD4-201ENST00000298317 RAET1GQ6H3X3 334 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms