RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 PNPLA3Q9NST1 481 aa13.41□□□□□ -0.26
C9orf3-202ENST00000297979 ZNF451Q9Y4E5 1061 aa13.41□□□□□ -0.26
C9orf3-202ENST00000297979 H0YAE9 185 aa13.41□□□□□ -0.26
C9orf3-202ENST00000297979 PDE9AO76083 593 aa13.41□□□□□ -0.26
C9orf3-202ENST00000297979 PGM3O95394 542 aa13.41□□□□□ -0.26
C9orf3-202ENST00000297979 FPR1P21462 350 aa13.41□□□□□ -0.26
C9orf3-202ENST00000297979 DNAJA1P31689 397 aaKnown RBP13.41□□□□□ -0.26
C9orf3-202ENST00000297979 PSMD7P51665 324 aa13.41□□□□□ -0.26
C9orf3-202ENST00000297979 XKP51811 444 aa13.41□□□□□ -0.26
C9orf3-202ENST00000297979 ARHGDIAP52565 204 aa13.41□□□□□ -0.26
C9orf3-202ENST00000297979 C6orf132Q5T0Z8 1188 aa13.41□□□□□ -0.26
C9orf3-202ENST00000297979 ARMC8Q8IUR7 673 aa13.41□□□□□ -0.26
C9orf3-202ENST00000297979 METTL25Q8N6Q8 603 aa13.41□□□□□ -0.26
C9orf3-202ENST00000297979 GEMIN6Q8WXD5 167 aaKnown RBP13.41□□□□□ -0.26
C9orf3-202ENST00000297979 TGM7Q96PF1 710 aa13.41□□□□□ -0.26
C9orf3-202ENST00000297979 NPLQ9BXD5 320 aaPredicted RBP13.41□□□□□ -0.26
C9orf3-202ENST00000297979 GABARAPL1Q9H0R8 117 aa13.41□□□□□ -0.26
C9orf3-202ENST00000297979 ZNF696Q9H7X3 374 aa13.41□□□□□ -0.26
C9orf3-202ENST00000297979 REEP1Q9H902 201 aa13.41□□□□□ -0.26
C9orf3-202ENST00000297979 PRMT8Q9NR22 394 aaPredicted RBP13.41□□□□□ -0.26
C9orf3-202ENST00000297979 SAMHD1Q9Y3Z3 626 aaKnown RBP13.41□□□□□ -0.26
C9orf3-202ENST00000297979 CSNK1G3Q9Y6M4 447 aa13.41□□□□□ -0.26
C9orf3-202ENST00000297979 RNF215Q9Y6U7 377 aa13.41□□□□□ -0.26
C9orf3-202ENST00000297979 A0A1B0GTW7 788 aa13.4□□□□□ -0.26
C9orf3-202ENST00000297979 TLCD2A6NGC4 264 aa13.4□□□□□ -0.26
C9orf3-202ENST00000297979 A6NHS1 94 aa13.4□□□□□ -0.26
C9orf3-202ENST00000297979 SLC28A2O43868 658 aa13.4□□□□□ -0.26
C9orf3-202ENST00000297979 SRPX2O60687 465 aaPredicted RBP13.4□□□□□ -0.26
C9orf3-202ENST00000297979 HMGN2P05204 90 aaKnown RBP13.4□□□□□ -0.26
C9orf3-202ENST00000297979 CTSKP43235 329 aa13.4□□□□□ -0.26
C9orf3-202ENST00000297979 DHPSP49366 369 aaPredicted RBP13.4□□□□□ -0.26
C9orf3-202ENST00000297979 GFERP55789 205 aa13.4□□□□□ -0.26
C9orf3-202ENST00000297979 ADARB1P78563 741 aaKnown RBP13.4□□□□□ -0.26
C9orf3-202ENST00000297979 EPS8Q12929 822 aa13.4□□□□□ -0.26
C9orf3-202ENST00000297979 LASP1Q14847 261 aaKnown RBP13.4□□□□□ -0.26
C9orf3-202ENST00000297979 LTB4RQ15722 352 aa13.4□□□□□ -0.26
C9orf3-202ENST00000297979 MAPK11Q15759 364 aa13.4□□□□□ -0.26
C9orf3-202ENST00000297979 PRTGQ2VWP7 1150 aa13.4□□□□□ -0.26
C9orf3-202ENST00000297979 ISLR2Q6UXK2 745 aa13.4□□□□□ -0.26
C9orf3-202ENST00000297979 WDR5BQ86VZ2 330 aa13.4□□□□□ -0.26
C9orf3-202ENST00000297979 CA13Q8N1Q1 262 aa13.4□□□□□ -0.26
C9orf3-202ENST00000297979 ARHGEF39Q8N4T4 335 aa13.4□□□□□ -0.26
C9orf3-202ENST00000297979 OR5T3Q8NGG3 340 aa13.4□□□□□ -0.26
C9orf3-202ENST00000297979 XAGE5Q8WWM1 108 aa13.4□□□□□ -0.26
C9orf3-202ENST00000297979 FBXL20Q96IG2 436 aa13.4□□□□□ -0.26
C9orf3-202ENST00000297979 RAB33BQ9H082 229 aa13.4□□□□□ -0.26
C9orf3-202ENST00000297979 RUBCNLQ9H714 662 aa13.4□□□□□ -0.26
C9orf3-202ENST00000297979 ANKHQ9HCJ1 492 aa13.4□□□□□ -0.26
C9orf3-202ENST00000297979 LRIT1Q9P2V4 623 aa13.4□□□□□ -0.26
C9orf3-202ENST00000297979 DPPA5A6NC42 116 aa13.4□□□□□ -0.26
C9orf3-202ENST00000297979 HS6ST1O60243 411 aa13.4□□□□□ -0.26
C9orf3-202ENST00000297979 CTSBP07858 339 aa13.4□□□□□ -0.26
C9orf3-202ENST00000297979 TNFRSF1BP20333 461 aa13.4□□□□□ -0.26
C9orf3-202ENST00000297979 PRKACGP22612 351 aa13.4□□□□□ -0.26
C9orf3-202ENST00000297979 PPP2R1BP30154 601 aa13.4□□□□□ -0.26
C9orf3-202ENST00000297979 SHC2P98077 582 aa13.4□□□□□ -0.26
C9orf3-202ENST00000297979 COL9A2Q14055 689 aaPredicted RBP13.4□□□□□ -0.26
C9orf3-202ENST00000297979 ZIK1Q3SY52 487 aaPredicted RBP13.4□□□□□ -0.26
C9orf3-202ENST00000297979 USP53Q70EK8 1073 aa13.4□□□□□ -0.26
C9orf3-202ENST00000297979 CEP68Q76N32 757 aa13.4□□□□□ -0.26
C9orf3-202ENST00000297979 ZFAND2BQ8WV99 257 aa13.4□□□□□ -0.26
C9orf3-202ENST00000297979 NRBF2Q96F24 287 aa13.4□□□□□ -0.26
C9orf3-202ENST00000297979 SOX17Q9H6I2 414 aaPredicted RBP13.4□□□□□ -0.26
C9orf3-202ENST00000297979 THSD1Q9NS62 852 aa13.4□□□□□ -0.26
C9orf3-202ENST00000297979 NDUFAF4Q9P032 175 aa13.4□□□□□ -0.26
C9orf3-202ENST00000297979 SGK494L7N484 410 aa13.4□□□□□ -0.27
C9orf3-202ENST00000297979 GNSP15586 552 aa13.4□□□□□ -0.27
C9orf3-202ENST00000297979 ALDH4A1P30038 563 aa13.4□□□□□ -0.27
C9orf3-202ENST00000297979 MLLT3P42568 568 aaPredicted RBP13.4□□□□□ -0.27
C9orf3-202ENST00000297979 BNIP3Q12983 259 aa13.4□□□□□ -0.27
C9orf3-202ENST00000297979 OR4N5Q8IXE1 308 aa13.4□□□□□ -0.27
C9orf3-202ENST00000297979 NUP43Q8NFH3 380 aa13.4□□□□□ -0.27
C9orf3-202ENST00000297979 KAT2AQ92830 837 aa13.4□□□□□ -0.27
C9orf3-202ENST00000297979 ZNF347Q96SE7 839 aa13.4□□□□□ -0.27
C9orf3-202ENST00000297979 TOR3AQ9H497 397 aa13.4□□□□□ -0.27
C9orf3-202ENST00000297979 EPHA6Q9UF33 1036 aa13.4□□□□□ -0.27
C9orf3-202ENST00000297979 CYR61O00622 381 aa13.39□□□□□ -0.27
C9orf3-202ENST00000297979 NR2F1P10589 423 aa13.39□□□□□ -0.27
C9orf3-202ENST00000297979 TDGF1P13385 188 aa13.39□□□□□ -0.27
C9orf3-202ENST00000297979 ITGA2P17301 1181 aa13.39□□□□□ -0.27
C9orf3-202ENST00000297979 OR1E2P47887 323 aa13.39□□□□□ -0.27
C9orf3-202ENST00000297979 ARRB1P49407 418 aaPredicted RBP13.39□□□□□ -0.27
C9orf3-202ENST00000297979 SIGLEC14Q08ET2 396 aa13.39□□□□□ -0.27
C9orf3-202ENST00000297979 SYPL1Q16563 259 aa13.39□□□□□ -0.27
C9orf3-202ENST00000297979 PMS2CLQ68D20 193 aa13.39□□□□□ -0.27
C9orf3-202ENST00000297979 TMEM53Q6P2H8 277 aa13.39□□□□□ -0.27
C9orf3-202ENST00000297979 USP51Q70EK9 711 aa13.39□□□□□ -0.27
C9orf3-202ENST00000297979 TSEN54Q7Z6J9 526 aaKnown RBP13.39□□□□□ -0.27
C9orf3-202ENST00000297979 SLC25A45Q8N413 288 aa13.39□□□□□ -0.27
C9orf3-202ENST00000297979 NCSTNQ92542 709 aa13.39□□□□□ -0.27
C9orf3-202ENST00000297979 COL26A1Q96A83 441 aa13.39□□□□□ -0.27
C9orf3-202ENST00000297979 ZDHHC12Q96GR4 267 aa13.39□□□□□ -0.27
C9orf3-202ENST00000297979 ZNF607Q96SK3 696 aa13.39□□□□□ -0.27
C9orf3-202ENST00000297979 CD180Q99467 661 aa13.39□□□□□ -0.27
C9orf3-202ENST00000297979 EPYCQ99645 322 aa13.39□□□□□ -0.27
C9orf3-202ENST00000297979 TREX2Q9BQ50 279 aaPredicted RBP13.39□□□□□ -0.27
C9orf3-202ENST00000297979 YIPF4Q9BSR8 244 aa13.39□□□□□ -0.27
C9orf3-202ENST00000297979 SOHLH2Q9NX45 425 aa13.39□□□□□ -0.27
C9orf3-202ENST00000297979 C3orf18Q9UK00 162 aa13.39□□□□□ -0.27
C9orf3-202ENST00000297979 CACNA1IQ9P0X4 2223 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms