RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 ZCCHC23Q6ZST2 131 aa11.26□□□□□ -0.61
HMGB2-201ENST00000296503 SPATA24Q86W54 205 aa11.26□□□□□ -0.61
HMGB2-201ENST00000296503 BEST3Q8N1M1 668 aa11.26□□□□□ -0.61
HMGB2-201ENST00000296503 APCDD1LQ8NCL9 501 aa11.26□□□□□ -0.61
HMGB2-201ENST00000296503 MORN4Q8NDC4 146 aa11.26□□□□□ -0.61
HMGB2-201ENST00000296503 OR6Y1Q8NGX8 325 aa11.26□□□□□ -0.61
HMGB2-201ENST00000296503 PPP1R14CQ8TAE6 165 aa11.26□□□□□ -0.61
HMGB2-201ENST00000296503 TM4SF18Q96CE8 201 aa11.26□□□□□ -0.61
HMGB2-201ENST00000296503 APIPQ96GX9 242 aa11.26□□□□□ -0.61
HMGB2-201ENST00000296503 UTP23Q9BRU9 249 aaKnown RBP11.26□□□□□ -0.61
HMGB2-201ENST00000296503 EML4Q9HC35 981 aaKnown RBP11.26□□□□□ -0.61
HMGB2-201ENST00000296503 TRAV17A0A0B4J275 112 aa11.25□□□□□ -0.61
HMGB2-201ENST00000296503 GNG14A0A1W2PPG7 69 aa11.25□□□□□ -0.61
HMGB2-201ENST00000296503 SERTM1A2A2V5 107 aa11.25□□□□□ -0.61
HMGB2-201ENST00000296503 OR5H15A6NDH6 313 aa11.25□□□□□ -0.61
HMGB2-201ENST00000296503 B2RBV5 119 aa11.25□□□□□ -0.61
HMGB2-201ENST00000296503 AZIN1O14977 448 aa11.25□□□□□ -0.61
HMGB2-201ENST00000296503 DENRO43583 198 aaKnown RBP11.25□□□□□ -0.61
HMGB2-201ENST00000296503 OR10H2O60403 315 aa11.25□□□□□ -0.61
HMGB2-201ENST00000296503 MAN1A2O60476 641 aa11.25□□□□□ -0.61
HMGB2-201ENST00000296503 NPHS1O60500 1241 aa11.25□□□□□ -0.61
HMGB2-201ENST00000296503 ZFAND5O76080 213 aa11.25□□□□□ -0.61
HMGB2-201ENST00000296503 BPGMP07738 259 aa11.25□□□□□ -0.61
HMGB2-201ENST00000296503 ALOX15P16050 662 aaPredicted RBP11.25□□□□□ -0.61
HMGB2-201ENST00000296503 RPL5P46777 297 aaKnown RBP11.25□□□□□ -0.61
HMGB2-201ENST00000296503 TNFSF10P50591 281 aa11.25□□□□□ -0.61
HMGB2-201ENST00000296503 OC90Q02509 493 aaPredicted RBP11.25□□□□□ -0.61
HMGB2-201ENST00000296503 SPIN4Q56A73 249 aa11.25□□□□□ -0.61
HMGB2-201ENST00000296503 OR4K14Q8NGD5 310 aa11.25□□□□□ -0.61
HMGB2-201ENST00000296503 NPAS2Q99743 824 aa11.25□□□□□ -0.61
HMGB2-201ENST00000296503 S100A14Q9HCY8 104 aa11.25□□□□□ -0.61
HMGB2-201ENST00000296503 TNFRSF12AQ9NP84 129 aa11.25□□□□□ -0.61
HMGB2-201ENST00000296503 TBCCD1Q9NVR7 557 aa11.25□□□□□ -0.61
HMGB2-201ENST00000296503 ANKRD10Q9NXR5 420 aa11.25□□□□□ -0.61
HMGB2-201ENST00000296503 COPG1Q9Y678 874 aaKnown RBP11.25□□□□□ -0.61
HMGB2-201ENST00000296503 A0A0G2JND7 137 aa11.25□□□□□ -0.61
HMGB2-201ENST00000296503 C1orf226A1L170 272 aa11.25□□□□□ -0.61
HMGB2-201ENST00000296503 GABRR3A8MPY1 467 aa11.25□□□□□ -0.61
HMGB2-201ENST00000296503 PCDH7O60245 1069 aa11.25□□□□□ -0.61
HMGB2-201ENST00000296503 CHEK2O96017 543 aa11.25□□□□□ -0.61
HMGB2-201ENST00000296503 CHRNGP07510 517 aa11.25□□□□□ -0.61
HMGB2-201ENST00000296503 UBTFL6P0CB48 400 aaPredicted RBP11.25□□□□□ -0.61
HMGB2-201ENST00000296503 ALDH9A1P49189 494 aa11.25□□□□□ -0.61
HMGB2-201ENST00000296503 GPR143P51810 404 aa11.25□□□□□ -0.61
HMGB2-201ENST00000296503 XKP51811 444 aa11.25□□□□□ -0.61
HMGB2-201ENST00000296503 TRA2BP62995 288 aaKnown RBP11.25□□□□□ -0.61
HMGB2-201ENST00000296503 IGLV3-21P80748 117 aaPredicted RBP11.25□□□□□ -0.61
HMGB2-201ENST00000296503 PLIN5Q00G26 463 aa11.25□□□□□ -0.61
HMGB2-201ENST00000296503 ARL13AQ5H913 290 aaPredicted RBP11.25□□□□□ -0.61
HMGB2-201ENST00000296503 HSDL2Q6YN16 418 aa11.25□□□□□ -0.61
HMGB2-201ENST00000296503 B3GNT6Q6ZMB0 384 aa11.25□□□□□ -0.61
HMGB2-201ENST00000296503 ULK2Q8IYT8 1036 aa11.25□□□□□ -0.61
HMGB2-201ENST00000296503 MARVELD2Q8N4S9 558 aa11.25□□□□□ -0.61
HMGB2-201ENST00000296503 SLC2A12Q8TD20 617 aa11.25□□□□□ -0.61
HMGB2-201ENST00000296503 DOK4Q8TEW6 326 aa11.25□□□□□ -0.61
HMGB2-201ENST00000296503 SNRNP40Q96DI7 357 aaKnown RBP11.25□□□□□ -0.61
HMGB2-201ENST00000296503 SENP5Q96HI0 755 aaPredicted RBP11.25□□□□□ -0.61
HMGB2-201ENST00000296503 PELOQ9BRX2 385 aaKnown RBP11.25□□□□□ -0.61
HMGB2-201ENST00000296503 FAIM2Q9BWQ8 316 aa11.25□□□□□ -0.61
HMGB2-201ENST00000296503 RNF32Q9H0A6 362 aa11.25□□□□□ -0.61
HMGB2-201ENST00000296503 COPS7AQ9UBW8 275 aa11.25□□□□□ -0.61
HMGB2-201ENST00000296503 PSME2Q9UL46 239 aa11.25□□□□□ -0.61
HMGB2-201ENST00000296503 PPIEQ9UNP9 301 aaKnown RBP11.25□□□□□ -0.61
HMGB2-201ENST00000296503 PCDHA9Q9Y5H5 950 aa11.25□□□□□ -0.61
HMGB2-201ENST00000296503 BSNQ9UPA5 3926 aa11.24□□□□□ -0.61
HMGB2-201ENST00000296503 SLC28A1O00337 649 aa11.24□□□□□ -0.61
HMGB2-201ENST00000296503 ERAL1O75616 437 aaKnown RBP11.24□□□□□ -0.61
HMGB2-201ENST00000296503 WISP1O95388 367 aa11.24□□□□□ -0.61
HMGB2-201ENST00000296503 ANXA4P09525 319 aaPredicted RBP11.24□□□□□ -0.61
HMGB2-201ENST00000296503 SLC35E2P0CK97 266 aa11.24□□□□□ -0.61
HMGB2-201ENST00000296503 IDO1P14902 403 aa11.24□□□□□ -0.61
HMGB2-201ENST00000296503 CD96P40200 585 aa11.24□□□□□ -0.61
HMGB2-201ENST00000296503 MLF1P58340 268 aa11.24□□□□□ -0.61
HMGB2-201ENST00000296503 TUBA3CQ13748 450 aa11.24□□□□□ -0.61
HMGB2-201ENST00000296503 ZNF267Q14586 743 aaPredicted RBP11.24□□□□□ -0.61
HMGB2-201ENST00000296503 PRR30Q53SZ7 412 aaPredicted RBP11.24□□□□□ -0.61
HMGB2-201ENST00000296503 ATG16L1Q676U5 607 aa11.24□□□□□ -0.61
HMGB2-201ENST00000296503 TUBA3EQ6PEY2 450 aa11.24□□□□□ -0.61
HMGB2-201ENST00000296503 DGAT2L6Q6ZPD8 337 aa11.24□□□□□ -0.61
HMGB2-201ENST00000296503 TRIM46Q7Z4K8 759 aa11.24□□□□□ -0.61
HMGB2-201ENST00000296503 DHDDSQ86SQ9 333 aa11.24□□□□□ -0.61
HMGB2-201ENST00000296503 CLYBLQ8N0X4 340 aa11.24□□□□□ -0.61
HMGB2-201ENST00000296503 LGI4Q8N135 537 aa11.24□□□□□ -0.61
HMGB2-201ENST00000296503 ZNF321PQ8N8H1 164 aa11.24□□□□□ -0.61
HMGB2-201ENST00000296503 RIT1Q92963 219 aa11.24□□□□□ -0.61
HMGB2-201ENST00000296503 C19orf60Q96EN9 201 aa11.24□□□□□ -0.61
HMGB2-201ENST00000296503 ART5Q96L15 291 aa11.24□□□□□ -0.61
HMGB2-201ENST00000296503 CNPPD1Q9BV87 410 aa11.24□□□□□ -0.61
HMGB2-201ENST00000296503 KLHL4Q9C0H6 718 aa11.24□□□□□ -0.61
HMGB2-201ENST00000296503 LIN28AQ9H9Z2 209 aaKnown RBP11.24□□□□□ -0.61
HMGB2-201ENST00000296503 SLC7A8Q9UHI5 535 aa11.24□□□□□ -0.61
HMGB2-201ENST00000296503 DCTN4Q9UJW0 460 aa11.24□□□□□ -0.61
HMGB2-201ENST00000296503 DLGAP4Q9Y2H0 992 aa11.24□□□□□ -0.61
HMGB2-201ENST00000296503 TRAF6Q9Y4K3 522 aa11.24□□□□□ -0.61
HMGB2-201ENST00000296503 PCDHGA10Q9Y5H3 936 aa11.24□□□□□ -0.61
HMGB2-201ENST00000296503 VPS4BO75351 444 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 SEC22BO75396 215 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 DDAH2O95865 285 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 FGF4P08620 206 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 ZCCHC18P0CG32 403 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms