RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 WDR1O75083 606 aa23.16■■□□□ 1.3
U2AF1-201ENST00000291552 PDYNP01213 254 aa23.16■■□□□ 1.3
U2AF1-201ENST00000291552 CPMP14384 443 aa23.16■■□□□ 1.3
U2AF1-201ENST00000291552 GCAP28676 217 aa23.16■■□□□ 1.3
U2AF1-201ENST00000291552 SOX18P35713 384 aa23.16■■□□□ 1.3
U2AF1-201ENST00000291552 XKP51811 444 aa23.16■■□□□ 1.3
U2AF1-201ENST00000291552 TBL3Q12788 808 aaKnown RBP23.16■■□□□ 1.3
U2AF1-201ENST00000291552 DUSP8Q13202 625 aa23.16■■□□□ 1.3
U2AF1-201ENST00000291552 RPS6KA2Q15349 733 aa23.16■■□□□ 1.3
U2AF1-201ENST00000291552 C10orf62Q5T681 223 aaPredicted RBP23.16■■□□□ 1.3
U2AF1-201ENST00000291552 C1orf185Q5T7R7 199 aa23.16■■□□□ 1.3
U2AF1-201ENST00000291552 LIX1LQ8IVB5 337 aa23.16■■□□□ 1.3
U2AF1-201ENST00000291552 DMRTC2Q8IXT2 367 aaPredicted RBP23.16■■□□□ 1.3
U2AF1-201ENST00000291552 TP53INP1Q96A56 240 aa23.16■■□□□ 1.3
U2AF1-201ENST00000291552 DOHHQ9BU89 302 aa23.16■■□□□ 1.3
U2AF1-201ENST00000291552 C1QTNF3Q9BXJ4 246 aa23.16■■□□□ 1.3
U2AF1-201ENST00000291552 OR10A5Q9H207 317 aa23.16■■□□□ 1.3
U2AF1-201ENST00000291552 EXO5Q9H790 373 aa23.16■■□□□ 1.3
U2AF1-201ENST00000291552 SLC12A4Q9UP95 1085 aa23.16■■□□□ 1.3
U2AF1-201ENST00000291552 IKBKGQ9Y6K9 419 aa23.16■■□□□ 1.3
U2AF1-201ENST00000291552 CNTFP26441 200 aa23.15■■□□□ 1.3
U2AF1-201ENST00000291552 TRPC1P48995 793 aa23.15■■□□□ 1.3
U2AF1-201ENST00000291552 DUSP2Q05923 314 aa23.15■■□□□ 1.3
U2AF1-201ENST00000291552 MGAT2Q10469 447 aa23.15■■□□□ 1.3
U2AF1-201ENST00000291552 CCNYL2Q5T2Q4 361 aa23.15■■□□□ 1.3
U2AF1-201ENST00000291552 WLSQ5T9L3 541 aa23.15■■□□□ 1.3
U2AF1-201ENST00000291552 FNDC7Q5VTL7 733 aa23.15■■□□□ 1.3
U2AF1-201ENST00000291552 TAGAPQ8N103 731 aa23.15■■□□□ 1.3
U2AF1-201ENST00000291552 OR10Q1Q8NGQ4 319 aa23.15■■□□□ 1.3
U2AF1-201ENST00000291552 NEIL3Q8TAT5 605 aa23.15■■□□□ 1.3
U2AF1-201ENST00000291552 ZNF592Q92610 1267 aa23.15■■□□□ 1.3
U2AF1-201ENST00000291552 JSRP1Q96MG2 331 aaPredicted RBP23.15■■□□□ 1.3
U2AF1-201ENST00000291552 HBEGFQ99075 208 aa23.15■■□□□ 1.3
U2AF1-201ENST00000291552 ELOVL6Q9H5J4 265 aa23.15■■□□□ 1.3
U2AF1-201ENST00000291552 ACKR4Q9NPB9 350 aa23.15■■□□□ 1.3
U2AF1-201ENST00000291552 RYDENQ9NUL5 291 aaKnown RBP23.15■■□□□ 1.3
U2AF1-201ENST00000291552 QPCTLQ9NXS2 382 aa23.15■■□□□ 1.3
U2AF1-201ENST00000291552 PCDHA9Q9Y5H5 950 aa23.15■■□□□ 1.3
U2AF1-201ENST00000291552 NPFFR2Q9Y5X5 522 aa23.15■■□□□ 1.3
U2AF1-201ENST00000291552 A0A087WUV0 522 aaPredicted RBP23.14■■□□□ 1.29
U2AF1-201ENST00000291552 ANKRD33BA6NCL7 494 aa23.14■■□□□ 1.29
U2AF1-201ENST00000291552 GPX3P22352 226 aa23.14■■□□□ 1.29
U2AF1-201ENST00000291552 MAPK12P53778 367 aa23.14■■□□□ 1.29
U2AF1-201ENST00000291552 TCHHL1Q5QJ38 904 aaPredicted RBP23.14■■□□□ 1.29
U2AF1-201ENST00000291552 SLC48A1Q6P1K1 146 aa23.14■■□□□ 1.29
U2AF1-201ENST00000291552 SEM1Q6ZVN7 128 aa23.14■■□□□ 1.29
U2AF1-201ENST00000291552 PAGE2Q7Z2X7 111 aa23.14■■□□□ 1.29
U2AF1-201ENST00000291552 PRR22Q8IZ63 422 aa23.14■■□□□ 1.29
U2AF1-201ENST00000291552 SIMC1Q8NDZ2 872 aa23.14■■□□□ 1.29
U2AF1-201ENST00000291552 MYRIPQ8NFW9 859 aa23.14■■□□□ 1.29
U2AF1-201ENST00000291552 SPPL2AQ8TCT8 520 aa23.14■■□□□ 1.29
U2AF1-201ENST00000291552 DIO2Q92813 273 aa23.14■■□□□ 1.29
U2AF1-201ENST00000291552 NTNG2Q96CW9 530 aa23.14■■□□□ 1.29
U2AF1-201ENST00000291552 ZNF597Q96LX8 424 aa23.14■■□□□ 1.29
U2AF1-201ENST00000291552 AHSPQ9NZD4 102 aa23.14■■□□□ 1.29
U2AF1-201ENST00000291552 ITGB1BP2Q9UKP3 347 aa23.14■■□□□ 1.29
U2AF1-201ENST00000291552 DOCK7Q96N67 2140 aa23.14■■□□□ 1.29
U2AF1-201ENST00000291552 KDM4EB2RXH2 506 aaPredicted RBP23.13■■□□□ 1.29
U2AF1-201ENST00000291552 OTCP00480 354 aa23.13■■□□□ 1.29
U2AF1-201ENST00000291552 HOXD4P09016 255 aaPredicted RBP23.13■■□□□ 1.29
U2AF1-201ENST00000291552 PORP16435 677 aaPredicted RBP23.13■■□□□ 1.29
U2AF1-201ENST00000291552 CAPN3P20807 821 aa23.13■■□□□ 1.29
U2AF1-201ENST00000291552 NT5EP21589 574 aa23.13■■□□□ 1.29
U2AF1-201ENST00000291552 FAM111BQ6SJ93 734 aa23.13■■□□□ 1.29
U2AF1-201ENST00000291552 CDH24Q86UP0 819 aa23.13■■□□□ 1.29
U2AF1-201ENST00000291552 ULK2Q8IYT8 1036 aa23.13■■□□□ 1.29
U2AF1-201ENST00000291552 SELENOMQ8WWX9 145 aa23.13■■□□□ 1.29
U2AF1-201ENST00000291552 TM4SF18Q96CE8 201 aa23.13■■□□□ 1.29
U2AF1-201ENST00000291552 RILPQ96NA2 401 aa23.13■■□□□ 1.29
U2AF1-201ENST00000291552 NXF5Q9H1B4 397 aaKnown RBP23.13■■□□□ 1.29
U2AF1-201ENST00000291552 UBQLN3Q9H347 655 aa23.13■■□□□ 1.29
U2AF1-201ENST00000291552 MAT2BQ9NZL9 334 aa23.13■■□□□ 1.29
U2AF1-201ENST00000291552 TRPS1Q9UHF7 1281 aa23.13■■□□□ 1.29
U2AF1-201ENST00000291552 HRNRQ86YZ3 2850 aaPredicted RBP23.13■■□□□ 1.29
U2AF1-201ENST00000291552 OR4F21O95013 312 aa23.12■■□□□ 1.29
U2AF1-201ENST00000291552 SNRPAP09012 282 aaKnown RBP23.12■■□□□ 1.29
U2AF1-201ENST00000291552 CTAGE8P0CG41 777 aa23.12■■□□□ 1.29
U2AF1-201ENST00000291552 GDF1P27539 372 aa23.12■■□□□ 1.29
U2AF1-201ENST00000291552 ZFP36L2P47974 494 aaKnown RBP23.12■■□□□ 1.29
U2AF1-201ENST00000291552 DLX5P56178 289 aa23.12■■□□□ 1.29
U2AF1-201ENST00000291552 TESK1Q15569 626 aa23.12■■□□□ 1.29
U2AF1-201ENST00000291552 PRICKLE4Q2TBC4 344 aa23.12■■□□□ 1.29
U2AF1-201ENST00000291552 HLA-DQA1Q5Y7H0 255 aa23.12■■□□□ 1.29
U2AF1-201ENST00000291552 CTAGE4Q8IX94 777 aa23.12■■□□□ 1.29
U2AF1-201ENST00000291552 C17orf47Q8NEP4 570 aa23.12■■□□□ 1.29
U2AF1-201ENST00000291552 OR7G1Q8NGA0 311 aa23.12■■□□□ 1.29
U2AF1-201ENST00000291552 TRPC4APQ8TEL6 797 aa23.12■■□□□ 1.29
U2AF1-201ENST00000291552 ANGPTL4Q9BY76 406 aa23.12■■□□□ 1.29
U2AF1-201ENST00000291552 BRF2Q9HAW0 419 aa23.12■■□□□ 1.29
U2AF1-201ENST00000291552 ALKBH4Q9NXW9 302 aa23.12■■□□□ 1.29
U2AF1-201ENST00000291552 ZNF639Q9UID6 485 aa23.12■■□□□ 1.29
U2AF1-201ENST00000291552 EXOC1LA0A1B0GW35 172 aa23.11■■□□□ 1.29
U2AF1-201ENST00000291552 C1orf226A1L170 272 aa23.11■■□□□ 1.29
U2AF1-201ENST00000291552 TP53I11O14683 189 aa23.11■■□□□ 1.29
U2AF1-201ENST00000291552 ABHD2P08910 425 aa23.11■■□□□ 1.29
U2AF1-201ENST00000291552 HSD17B3P37058 310 aa23.11■■□□□ 1.29
U2AF1-201ENST00000291552 FEN1P39748 380 aaKnown RBP23.11■■□□□ 1.29
U2AF1-201ENST00000291552 CRYZQ08257 329 aaKnown RBP23.11■■□□□ 1.29
U2AF1-201ENST00000291552 EXOSC7Q15024 291 aaKnown RBP23.11■■□□□ 1.29
U2AF1-201ENST00000291552 NNATQ16517 81 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms