RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 LSM1O15116 133 aaKnown RBP23.25■■□□□ 1.31
PDF-201ENST00000288022 BGNP21810 368 aa23.25■■□□□ 1.31
PDF-201ENST00000288022 MST1P26927 711 aa23.25■■□□□ 1.31
PDF-201ENST00000288022 GPR85P60893 370 aa23.25■■□□□ 1.31
PDF-201ENST00000288022 ALDH6A1Q02252 535 aaKnown RBP23.25■■□□□ 1.31
PDF-201ENST00000288022 EXOSC7Q15024 291 aaKnown RBP23.25■■□□□ 1.31
PDF-201ENST00000288022 RFTN2Q52LD8 501 aaPredicted RBP23.25■■□□□ 1.31
PDF-201ENST00000288022 IKBIPQ70UQ0 350 aa23.25■■□□□ 1.31
PDF-201ENST00000288022 SULF2Q8IWU5 870 aa23.25■■□□□ 1.31
PDF-201ENST00000288022 CPSF7Q8N684 471 aaKnown RBP23.25■■□□□ 1.31
PDF-201ENST00000288022 ZNF615Q8N8J6 731 aa23.25■■□□□ 1.31
PDF-201ENST00000288022 PSD4Q8NDX1 1056 aa23.25■■□□□ 1.31
PDF-201ENST00000288022 MGARPQ8TDB4 240 aa23.25■■□□□ 1.31
PDF-201ENST00000288022 NBASA2RRP1 2371 aa23.25■■□□□ 1.31
PDF-201ENST00000288022 ASPDHA6ND91 283 aa23.24■■□□□ 1.31
PDF-201ENST00000288022 PEX1O43933 1283 aa23.24■■□□□ 1.31
PDF-201ENST00000288022 S1PR1P21453 382 aa23.24■■□□□ 1.31
PDF-201ENST00000288022 GRK2P25098 689 aa23.24■■□□□ 1.31
PDF-201ENST00000288022 TACR1P25103 407 aa23.24■■□□□ 1.31
PDF-201ENST00000288022 MEOX1P50221 254 aa23.24■■□□□ 1.31
PDF-201ENST00000288022 NR0B1P51843 470 aaKnown RBP23.24■■□□□ 1.31
PDF-201ENST00000288022 MGAT2Q10469 447 aa23.24■■□□□ 1.31
PDF-201ENST00000288022 FHL5Q5TD97 284 aa23.24■■□□□ 1.31
PDF-201ENST00000288022 TAGAPQ8N103 731 aa23.24■■□□□ 1.31
PDF-201ENST00000288022 SLC15A4Q8N697 577 aa23.24■■□□□ 1.31
PDF-201ENST00000288022 PUM2Q8TB72 1066 aaKnown RBP eCLIP23.24■■□□□ 1.31
PDF-201ENST00000288022 EGLN2Q96KS0 407 aa23.24■■□□□ 1.31
PDF-201ENST00000288022 PPP3R2Q96LZ3 170 aa23.24■■□□□ 1.31
PDF-201ENST00000288022 CCT7Q99832 543 aa23.24■■□□□ 1.31
PDF-201ENST00000288022 TSPAN10Q9H1Z9 355 aaPredicted RBP23.24■■□□□ 1.31
PDF-201ENST00000288022 ZNF395Q9H8N7 513 aaPredicted RBP23.24■■□□□ 1.31
PDF-201ENST00000288022 ARGLU1Q9NWB6 273 aaPredicted RBP23.24■■□□□ 1.31
PDF-201ENST00000288022 TMED5Q9Y3A6 229 aa23.24■■□□□ 1.31
PDF-201ENST00000288022 UBR5O95071 2799 aaPredicted RBP23.24■■□□□ 1.31
PDF-201ENST00000288022 ATP6AP2A0A1C7CYW4 349 aa23.23■■□□□ 1.31
PDF-201ENST00000288022 PEX11AO75192 247 aa23.23■■□□□ 1.31
PDF-201ENST00000288022 ATP6AP2O75787 350 aa23.23■■□□□ 1.31
PDF-201ENST00000288022 NADKO95544 446 aaPredicted RBP23.23■■□□□ 1.31
PDF-201ENST00000288022 PCSK2P16519 638 aa23.23■■□□□ 1.31
PDF-201ENST00000288022 SDC1P18827 310 aa23.23■■□□□ 1.31
PDF-201ENST00000288022 MPIP34949 423 aa23.23■■□□□ 1.31
PDF-201ENST00000288022 SLC1A6P48664 564 aa23.23■■□□□ 1.31
PDF-201ENST00000288022 TDGF1P3P51864 188 aa23.23■■□□□ 1.31
PDF-201ENST00000288022 MRPS35P82673 323 aaKnown RBP23.23■■□□□ 1.31
PDF-201ENST00000288022 STX3Q13277 289 aa23.23■■□□□ 1.31
PDF-201ENST00000288022 TRMT12Q53H54 448 aaKnown RBP23.23■■□□□ 1.31
PDF-201ENST00000288022 GFRALQ6UXV0 394 aa23.23■■□□□ 1.31
PDF-201ENST00000288022 FAM9CQ8IZT9 166 aa23.23■■□□□ 1.31
PDF-201ENST00000288022 OR9A2Q8NGT5 310 aa23.23■■□□□ 1.31
PDF-201ENST00000288022 C16orf52Q8NHV5 167 aa23.23■■□□□ 1.31
PDF-201ENST00000288022 GFM2Q969S9 779 aaKnown RBP23.23■■□□□ 1.31
PDF-201ENST00000288022 TLCD1Q96CP7 247 aa23.23■■□□□ 1.31
PDF-201ENST00000288022 TSSK3Q96PN8 268 aa23.23■■□□□ 1.31
PDF-201ENST00000288022 NKIRAS1Q9NYS0 192 aa23.23■■□□□ 1.31
PDF-201ENST00000288022 SEC14L3Q9UDX4 400 aa23.23■■□□□ 1.31
PDF-201ENST00000288022 GIMAP2Q9UG22 337 aa23.23■■□□□ 1.31
PDF-201ENST00000288022 CFL2Q9Y281 166 aa23.23■■□□□ 1.31
PDF-201ENST00000288022 UNC5CO95185 931 aa23.22■■□□□ 1.31
PDF-201ENST00000288022 LRATO95237 230 aa23.22■■□□□ 1.31
PDF-201ENST00000288022 ZNF24P17028 368 aa23.22■■□□□ 1.31
PDF-201ENST00000288022 NTSP30990 170 aa23.22■■□□□ 1.31
PDF-201ENST00000288022 ATP6AP1LQ52LC2 224 aa23.22■■□□□ 1.31
PDF-201ENST00000288022 XKR7Q5GH72 579 aa23.22■■□□□ 1.31
PDF-201ENST00000288022 FAM26EQ8N5C1 309 aa23.22■■□□□ 1.31
PDF-201ENST00000288022 ZNF781Q8N8C0 355 aa23.22■■□□□ 1.31
PDF-201ENST00000288022 GOLM1Q8NBJ4 401 aa23.22■■□□□ 1.31
PDF-201ENST00000288022 OR52R1Q8NGF1 315 aa23.22■■□□□ 1.31
PDF-201ENST00000288022 CLHC1Q8NHS4 586 aa23.22■■□□□ 1.31
PDF-201ENST00000288022 ZNF675Q8TD23 568 aa23.22■■□□□ 1.31
PDF-201ENST00000288022 KAT2AQ92830 837 aa23.22■■□□□ 1.31
PDF-201ENST00000288022 TP53INP1Q96A56 240 aa23.22■■□□□ 1.31
PDF-201ENST00000288022 CTHRC1Q96CG8 243 aa23.22■■□□□ 1.31
PDF-201ENST00000288022 SPACA9Q96E40 222 aaPredicted RBP23.22■■□□□ 1.31
PDF-201ENST00000288022 FCRL1Q96LA6 429 aa23.22■■□□□ 1.31
PDF-201ENST00000288022 SGCZQ96LD1 299 aa23.22■■□□□ 1.31
PDF-201ENST00000288022 ZNF639Q9UID6 485 aa23.22■■□□□ 1.31
PDF-201ENST00000288022 RAP2CQ9Y3L5 183 aa23.22■■□□□ 1.31
PDF-201ENST00000288022 NPIPA5E9PKD4 350 aa23.21■■□□□ 1.31
PDF-201ENST00000288022 G3V3Y1 287 aa23.21■■□□□ 1.31
PDF-201ENST00000288022 AKAP10O43572 662 aa23.21■■□□□ 1.31
PDF-201ENST00000288022 SNUPNO95149 360 aaKnown RBP23.21■■□□□ 1.31
PDF-201ENST00000288022 CBX7O95931 251 aa23.21■■□□□ 1.31
PDF-201ENST00000288022 P04436 131 aa23.21■■□□□ 1.31
PDF-201ENST00000288022 JUNP05412 331 aaKnown RBP23.21■■□□□ 1.31
PDF-201ENST00000288022 GPX3P22352 226 aa23.21■■□□□ 1.31
PDF-201ENST00000288022 MAPK1P28482 360 aa23.21■■□□□ 1.31
PDF-201ENST00000288022 RFC3P40938 356 aa23.21■■□□□ 1.31
PDF-201ENST00000288022 NCBP2P52298 156 aaKnown RBP eCLIP23.21■■□□□ 1.31
PDF-201ENST00000288022 KCNK10P57789 538 aa23.21■■□□□ 1.31
PDF-201ENST00000288022 PDCD2Q16342 344 aaPredicted RBP23.21■■□□□ 1.31
PDF-201ENST00000288022 PRSS53Q2L4Q9 553 aa23.21■■□□□ 1.31
PDF-201ENST00000288022 ZNF791Q3KP31 576 aaPredicted RBP23.21■■□□□ 1.31
PDF-201ENST00000288022 ZNF628Q5EBL2 1059 aa23.21■■□□□ 1.31
PDF-201ENST00000288022 ZNF441Q8N8Z8 693 aa23.21■■□□□ 1.31
PDF-201ENST00000288022 POGLUT1Q8NBL1 392 aa23.21■■□□□ 1.31
PDF-201ENST00000288022 SIMC1Q8NDZ2 872 aa23.21■■□□□ 1.31
PDF-201ENST00000288022 FAM13CQ8NE31 585 aa23.21■■□□□ 1.31
PDF-201ENST00000288022 C3orf30Q96M34 536 aa23.21■■□□□ 1.31
PDF-201ENST00000288022 C20orf27Q9GZN8 174 aa23.21■■□□□ 1.31
PDF-201ENST00000288022 SACM1LQ9NTJ5 587 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms