RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 ATCAYQ86WG3 371 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 BOLLQ8N9W6 283 aaKnown RBP11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 NEK7Q8TDX7 302 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 CCDC107Q8WV48 283 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 HDHD5Q9BXW7 423 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 SLA2Q9H6Q3 261 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 NDUFAF4Q9P032 175 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 ERVK-19Q9WJR5 959 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 BACE2Q9Y5Z0 518 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 MEIOCA2RUB1 952 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 RLN2P04090 185 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 ADH5P11766 374 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 IDSP22304 550 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 HLA-FP30511 346 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 EIF2S3P41091 472 aaKnown RBP11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 VLDLRP98155 873 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 PTGES3Q15185 160 aaKnown RBP11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 ZNF676Q8N7Q3 588 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 ZNF248Q8NDW4 579 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 NEIL2Q969S2 332 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 ZBTB20Q9HC78 741 aaPredicted RBP11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 INTS6Q9UL03 887 aaKnown RBP11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 QSER1Q2KHR3 1735 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 COL11A1P12107 1806 aaPredicted RBP11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 A0A1W2PQL4 384 aaPredicted RBP11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 OR6C74A6NCV1 312 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 MCIDASD6RGH6 385 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 ZNF701M0R085 212 aaPredicted RBP11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 CD2P06729 351 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 RETP07949 1114 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 RHOP08100 348 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 HTR1BP28222 390 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 VIPR2P41587 438 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 ALDH3B2P48448 385 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 PRPF38BQ5VTL8 546 aaKnown RBP11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 SHQ1Q6PI26 577 aaKnown RBP11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 ARSKQ6UWY0 536 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 DLEU7Q6UYE1 221 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 CEP68Q76N32 757 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 PDZD9Q8IXQ8 264 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 PM20D2Q8IYS1 436 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 FAM46DQ8NEK8 389 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 OR2L5Q8NG80 312 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 CHPT1Q8WUD6 406 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 NCSTNQ92542 709 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 PFDN5Q99471 154 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 CLMPQ9H6B4 373 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 IFT46Q9NQC8 304 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 DOCK3Q8IZD9 2030 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 GABRR3A8MPY1 467 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 TEX46H3BTG2 121 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 CHP2O43745 196 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 SLC25A12O75746 678 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 C1GALT1C1LP0DN25 315 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 AMD1P17707 334 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 NT5EP21589 574 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 RAB5BP61020 215 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 DEFB103AP81534 67 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 ID2Q02363 134 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 BCL7AQ4VC05 210 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 SLC35F1Q5T1Q4 408 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 SFRP4Q6FHJ7 346 aaPredicted RBP11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 CNKSR3Q6P9H4 555 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 NUDT13Q86X67 352 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 GALNT13Q8IUC8 556 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 NLGN4XQ8N0W4 816 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 HDDC3Q8N4P3 179 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 ZSCAN1Q8NBB4 408 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 FIBINQ8TAL6 211 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 GPR151Q8TDV0 419 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 TCEAL4Q96EI5 215 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 LMLNQ96KR4 655 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 AIFM2Q9BRQ8 373 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 RNF121Q9H920 327 aa11.96□□□□□ -0.49
SLC6A1-201ENST00000287766 NFATC1O95644 943 aa11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 RB1P06400 928 aa11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 OR12D1P0DN82 309 aa11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 DNASE1L1P49184 302 aa11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 CCR8P51685 355 aa11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 S100A12P80511 92 aa11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 ODF4Q2M2E3 257 aa11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 REEP3Q6NUK4 255 aa11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 CCDC116Q8IYX3 515 aa11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 LCN9Q8WX39 176 aa11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 MACROD1Q9BQ69 325 aa11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 TMEM121BQ9BXQ6 578 aaPredicted RBP11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 METTL8Q9H825 291 aaKnown RBP11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 LRRC72A6NJI9 287 aa11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 ELOA3DA6NLF2 546 aaPredicted RBP11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 SCAMP2O15127 329 aaKnown RBP11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 NDUFS4O43181 175 aa11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 OR3A3P47888 321 aa11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 OR3A2P47893 321 aa11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 PGDP52209 483 aa11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 SMSP52788 366 aa11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 SNTA1Q13424 505 aa11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 GALEQ14376 348 aa11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 LRRC32Q14392 662 aa11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 GPR68Q15743 365 aa11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 ELOA3BQ3SY89 546 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms