RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 MED8Q96G25 268 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 TMEM169Q96HH4 297 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 LRIG1Q96JA1 1093 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 C1QTNF7Q9BXJ2 289 aa9.84□□□□□ -0.83
SKA1-201ENST00000285116 TRAV19A0A0A6YYK7 116 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 PIPSLA2A3N6 862 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 PRR23AA6NEV1 266 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 TMEM202A6NGA9 273 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 FFAR1O14842 300 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 TSPAN6O43657 245 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 ORC5O43913 435 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 SLC43A1O75387 559 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 SLC22A5O76082 557 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 MXD1Q05195 221 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 HNRNPA0Q13151 305 aaKnown RBP9.83□□□□□ -0.84
SKA1-201ENST00000285116 IKZF1Q13422 519 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 HIST2H2AA3Q6FI13 130 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 ADNP2Q6IQ32 1131 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 GAREM2Q75VX8 874 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 HDDC2Q7Z4H3 204 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 SLC34A3Q8N130 599 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 C9orf62Q8N4C0 152 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 FAM26EQ8N5C1 309 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 SLAIN1Q8ND83 568 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 OR4K1Q8NGD4 311 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 ZNF480Q8WV37 535 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 AP3S1Q92572 193 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 CCDC120Q96HB5 630 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 HHIPL1Q96JK4 782 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 TEFMQ96QE5 360 aaKnown RBP9.83□□□□□ -0.84
SKA1-201ENST00000285116 ANKRA2Q9H9E1 313 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.83□□□□□ -0.84
SKA1-201ENST00000285116 MCUBQ9NWR8 336 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 PLEKHB1Q9UF11 243 aaPredicted RBP9.83□□□□□ -0.84
SKA1-201ENST00000285116 DIMT1Q9UNQ2 313 aaKnown RBP9.83□□□□□ -0.84
SKA1-201ENST00000285116 DYRK1BQ9Y463 629 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 A0A1W2PRB8 838 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 WASHC1A8K0Z3 465 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 J3KTA2 159 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 BET1O15155 118 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 RFPL3O75679 317 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 TPPPO94811 219 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 SLC2A2P11168 524 aaPredicted RBP9.83□□□□□ -0.84
SKA1-201ENST00000285116 CKMT1AP12532 417 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 POU3F3P20264 500 aaPredicted RBP9.83□□□□□ -0.84
SKA1-201ENST00000285116 CHI3L1P36222 383 aaPredicted RBP9.83□□□□□ -0.84
SKA1-201ENST00000285116 BDKRB1P46663 353 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 WDR5P61964 334 aaKnown RBP9.83□□□□□ -0.84
SKA1-201ENST00000285116 TBPL1P62380 186 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 C1DQ13901 141 aaKnown RBP9.83□□□□□ -0.84
SKA1-201ENST00000285116 PUM1Q14671 1186 aaKnown RBP eCLIP9.83□□□□□ -0.84
SKA1-201ENST00000285116 NDUFA9Q16795 377 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 WSCD2Q2TBF2 565 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 CCSMST1Q4G0I0 132 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 FGF11Q92914 225 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 TRIM43Q96BQ3 446 aaPredicted RBP9.83□□□□□ -0.84
SKA1-201ENST00000285116 QRFPRQ96P65 431 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 MARVELD1Q9BSK0 173 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 POLR2J2Q9GZM3 115 aaKnown RBP9.83□□□□□ -0.84
SKA1-201ENST00000285116 MRPL39Q9NYK5 338 aaKnown RBP9.83□□□□□ -0.84
SKA1-201ENST00000285116 ELF5Q9UKW6 265 aaPredicted RBP9.83□□□□□ -0.84
SKA1-201ENST00000285116 NDRG2Q9UN36 371 aaKnown RBP9.83□□□□□ -0.84
SKA1-201ENST00000285116 PCDHGB7Q9Y5F8 929 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 DENND4AQ7Z401 1863 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 FAM240BA0A1B0GVZ2 78 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 IRGMA1A4Y4 181 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 LEFTY2O00292 366 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 ENTPD6O75354 484 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 FAM157BP0CG42 384 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 CPEP16870 476 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 ETV3P41162 512 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 LIM2P55344 173 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 POU6F2P78424 691 aaPredicted RBP9.83□□□□□ -0.84
SKA1-201ENST00000285116 EFNB1P98172 346 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 C2orf80Q0P641 193 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 COX10Q12887 443 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 DUSP6Q16828 381 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 ZNF284Q2VY69 593 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 PXDC1Q5TGL8 231 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 NXPE4Q6UWF7 544 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 PHC2Q8IXK0 858 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 ATP6V1C2Q8NEY4 427 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 GPR156Q8NFN8 814 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 OR5P2Q8WZ92 322 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 CIDECQ96AQ7 238 aaPredicted RBP9.83□□□□□ -0.84
SKA1-201ENST00000285116 LINC00615Q96LM1 132 aaPredicted RBP9.83□□□□□ -0.84
SKA1-201ENST00000285116 RIOK2Q9BVS4 552 aaKnown RBP9.83□□□□□ -0.84
SKA1-201ENST00000285116 POLDIP3Q9BY77 421 aaKnown RBP9.83□□□□□ -0.84
SKA1-201ENST00000285116 B3GNT4Q9C0J1 378 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 TXNL4BQ9NX01 149 aaKnown RBP9.83□□□□□ -0.84
SKA1-201ENST00000285116 CLEC2DQ9UHP7 191 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 CD84Q9UIB8 345 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 TMCC3Q9ULS5 477 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 POLHQ9Y253 713 aa9.83□□□□□ -0.84
SKA1-201ENST00000285116 SMLR1H3BR10 107 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 LILRB5O75023 590 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 POU2F1P14859 743 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 ARSBP15848 533 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 TIMP2P16035 220 aa9.82□□□□□ -0.84
SKA1-201ENST00000285116 ELAVL4P26378 380 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms