RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 CHST10O43529 356 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 SIGLEC6O43699 453 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 GALR3O60755 368 aaPredicted RBP10.32□□□□□ -0.76
GGPS1-201ENST00000282841 MITFO75030 526 aaPredicted RBP10.32□□□□□ -0.76
GGPS1-201ENST00000282841 GNSP15586 552 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 MATN1P21941 496 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 CCDC157Q569K6 752 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 PERM1Q5SV97 790 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 C1orf189Q5VU69 101 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 VANGL1Q8TAA9 524 aaPredicted RBP10.32□□□□□ -0.76
GGPS1-201ENST00000282841 SLC9A6Q92581 669 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 SERINC2Q96SA4 455 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 ADAP2Q9NPF8 381 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 EXD2Q9NVH0 621 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 MAPRE3Q9UPY8 281 aa10.32□□□□□ -0.76
GGPS1-201ENST00000282841 RIF1Q5UIP0 2472 aaKnown RBP10.31□□□□□ -0.76
GGPS1-201ENST00000282841 ZFHX2Q9C0A1 2572 aaPredicted RBP10.31□□□□□ -0.76
GGPS1-201ENST00000282841 FAM221BA6H8Z2 402 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 M0R296 226 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 FOXS1O43638 330 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 KRT75O95678 551 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 CT62P0C5K7 136 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 GSTT2P0CG29 244 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 GSTT2BP0CG30 244 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 CYP4B1P13584 511 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 FOLR1P15328 257 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 PTNP21246 168 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 MAOAP21397 527 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 MPIP34949 423 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 SOX18P35713 384 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 EEF1A2Q05639 463 aaKnown RBP10.31□□□□□ -0.76
GGPS1-201ENST00000282841 CCNJQ5T5M9 372 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 TMEM154Q6P9G4 183 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 OGFOD3Q6PK18 319 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 TTLL10Q6ZVT0 673 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 TSEN54Q7Z6J9 526 aaKnown RBP10.31□□□□□ -0.76
GGPS1-201ENST00000282841 C11orf74Q86VG3 221 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 C17orf82Q86X59 251 aaPredicted RBP10.31□□□□□ -0.76
GGPS1-201ENST00000282841 APLFQ8IW19 511 aaPredicted RBP10.31□□□□□ -0.76
GGPS1-201ENST00000282841 CA13Q8N1Q1 262 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 DNAJC22Q8N4W6 341 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 TTC29Q8NA56 475 aaPredicted RBP10.31□□□□□ -0.76
GGPS1-201ENST00000282841 FAM174AQ8TBP5 190 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 GAB3Q8WWW8 586 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 TBC1D20Q96BZ9 403 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 ELP4Q96EB1 424 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 SLC35G5Q96KT7 338 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 BDH2Q9BUT1 245 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 QPCTLQ9NXS2 382 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 AASSQ9UDR5 926 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 ITGB1BP2Q9UKP3 347 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 SLC22A7Q9Y694 548 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 FAM86C2PA6NEL3 165 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 TMEM150CB9EJG8 249 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 C5orf58C9J3I9 102 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 G3V2T6 193 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 FRS3O43559 492 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 TPST2O60704 377 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 DEAF1O75398 565 aaPredicted RBP10.31□□□□□ -0.76
GGPS1-201ENST00000282841 PRSS23O95084 383 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 ZBTB11O95625 1053 aaPredicted RBP10.31□□□□□ -0.76
GGPS1-201ENST00000282841 NT5EP21589 574 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 CD1CP29017 333 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 PCGF2P35227 344 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 FRKP42685 505 aaPredicted RBP10.31□□□□□ -0.76
GGPS1-201ENST00000282841 GSSP48637 474 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 KCNJ10P78508 379 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 KLHL35Q6PF15 583 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 SHISA6Q6ZSJ9 500 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 CBLL1Q75N03 491 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 SLC16A11Q8NCK7 471 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 NUP43Q8NFH3 380 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 OR4K14Q8NGD5 310 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 COL21A1Q96P44 957 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.31□□□□□ -0.76
GGPS1-201ENST00000282841 ANKHQ9HCJ1 492 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 ZNF304Q9HCX3 659 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 VCX3AQ9NNX9 186 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 TAS2R7Q9NYW3 318 aa10.31□□□□□ -0.76
GGPS1-201ENST00000282841 SAMD4AQ9UPU9 718 aaKnown RBP10.31□□□□□ -0.76
GGPS1-201ENST00000282841 URADA6NGE7 173 aa10.3□□□□□ -0.76
GGPS1-201ENST00000282841 TGFBR3LH3BV60 316 aa10.3□□□□□ -0.76
GGPS1-201ENST00000282841 CYR61O00622 381 aa10.3□□□□□ -0.76
GGPS1-201ENST00000282841 HYAL3O43820 417 aaPredicted RBP10.3□□□□□ -0.76
GGPS1-201ENST00000282841 FCMRO60667 390 aa10.3□□□□□ -0.76
GGPS1-201ENST00000282841 TFPTP0C1Z6 253 aa10.3□□□□□ -0.76
GGPS1-201ENST00000282841 NR2F1P10589 423 aa10.3□□□□□ -0.76
GGPS1-201ENST00000282841 PCSK2P16519 638 aa10.3□□□□□ -0.76
GGPS1-201ENST00000282841 GSTT1P30711 240 aa10.3□□□□□ -0.76
GGPS1-201ENST00000282841 ARL4DP49703 201 aa10.3□□□□□ -0.76
GGPS1-201ENST00000282841 TRA2BP62995 288 aaKnown RBP10.3□□□□□ -0.76
GGPS1-201ENST00000282841 SLC13A2Q13183 592 aa10.3□□□□□ -0.76
GGPS1-201ENST00000282841 NNATQ16517 81 aa10.3□□□□□ -0.76
GGPS1-201ENST00000282841 GPAT3Q53EU6 434 aa10.3□□□□□ -0.76
GGPS1-201ENST00000282841 TRIM61Q5EBN2 209 aa10.3□□□□□ -0.76
GGPS1-201ENST00000282841 PPP4R4Q6NUP7 873 aa10.3□□□□□ -0.76
GGPS1-201ENST00000282841 GIMAP1Q8WWP7 306 aa10.3□□□□□ -0.76
GGPS1-201ENST00000282841 ASPSCR1Q9BZE9 553 aa10.3□□□□□ -0.76
GGPS1-201ENST00000282841 VCXQ9H320 206 aa10.3□□□□□ -0.76
GGPS1-201ENST00000282841 NEUROD4Q9HD90 331 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms