RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 GPLD1P80108 840 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 ARHGEF7Q14155 803 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 GPR19Q15760 415 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 ZNF630Q2M218 657 aaPredicted RBP9.79□□□□□ -0.84
UPF3B-201ENST00000276201 ESCO2Q56NI9 601 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 ZNF628Q5EBL2 1059 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 CEP78Q5JTW2 689 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 GCNT6Q5T4J0 391 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 ARMC12Q5T9G4 340 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 LCN1P1Q5VSP4 162 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 SAXO2Q658L1 398 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 C22orf39Q6P5X5 142 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 ZNF782Q6ZMW2 699 aaPredicted RBP9.79□□□□□ -0.84
UPF3B-201ENST00000276201 GALNT10Q86SR1 603 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 LAX1Q8IWV1 398 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 PLA2G15Q8NCC3 412 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 ANKK1Q8NFD2 765 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 WDR20Q8TBZ3 569 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 SPPL2AQ8TCT8 520 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 UTP15Q8TED0 518 aaKnown RBP9.79□□□□□ -0.84
UPF3B-201ENST00000276201 AP3S1Q92572 193 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 MTFMTQ96DP5 389 aaKnown RBP9.79□□□□□ -0.84
UPF3B-201ENST00000276201 RNF31Q96EP0 1072 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 BOCQ9BWV1 1114 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 ARL15Q9NXU5 204 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 VPS29Q9UBQ0 182 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 KCNN3Q9UGI6 736 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 BOLA1Q9Y3E2 137 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 RPL36Q9Y3U8 105 aaKnown RBP9.79□□□□□ -0.84
UPF3B-201ENST00000276201 ASB4Q9Y574 426 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 SNX8Q9Y5X2 465 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.78□□□□□ -0.84
UPF3B-201ENST00000276201 GFYI3L273 518 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 YY2O15391 372 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 PLA2G10O15496 165 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 CYP7B1O75881 506 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 LRATO95237 230 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 CPSF4O95639 269 aaKnown RBP9.78□□□□□ -0.84
UPF3B-201ENST00000276201 C1SP09871 688 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 LAMP1P11279 417 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 CPEP16870 476 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 HTR2BP41595 481 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 NSG1P42857 185 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 KIR2DL3P43628 341 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 SLC9A3P48764 834 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 PNLIPRP1P54315 467 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 CDH12P55289 794 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 CLDN20P56880 219 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 PCBP3P57721 371 aaKnown RBP9.78□□□□□ -0.84
UPF3B-201ENST00000276201 ELAVL3Q14576 367 aaKnown RBP9.78□□□□□ -0.84
UPF3B-201ENST00000276201 CST6Q15828 149 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 WDR45BQ5MNZ6 344 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 CPTPQ5TA50 214 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 DDI2Q5TDH0 399 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 RETSATQ6NUM9 610 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 MZT2BQ6NZ67 158 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 TMEFF1Q8IYR6 380 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 CLECL1Q8IZS7 167 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 ASB11Q8WXH4 323 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 LOXL4Q96JB6 756 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 EXOC2Q96KP1 924 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 FYTTD1Q96QD9 318 aaKnown RBP9.78□□□□□ -0.84
UPF3B-201ENST00000276201 LYSMD1Q96S90 227 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 C12orf10Q9HB07 376 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 PRDM8Q9NQV8 689 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 ZDHHC3Q9NYG2 299 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 PLEKHB1Q9UF11 243 aaPredicted RBP9.78□□□□□ -0.84
UPF3B-201ENST00000276201 GMEB2Q9UKD1 530 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 PTPRZ1P23471 2315 aaPredicted RBP9.78□□□□□ -0.84
UPF3B-201ENST00000276201 CXorf51AA0A1B0GTR3 108 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 H0YIV9 168 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 MID1O15344 667 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 ZNF821O75541 412 aaPredicted RBP9.78□□□□□ -0.84
UPF3B-201ENST00000276201 C1QCP02747 245 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 NUDT7P0C024 238 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 IDSP22304 550 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 IFNA8P32881 189 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 SPAM1P38567 509 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 MAPK8P45983 427 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 BTG1P62324 171 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 PPP3R1P63098 170 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 ALDH6A1Q02252 535 aaKnown RBP9.78□□□□□ -0.84
UPF3B-201ENST00000276201 RPL6Q02878 288 aaKnown RBP9.78□□□□□ -0.84
UPF3B-201ENST00000276201 ZXDCQ2QGD7 858 aaPredicted RBP9.78□□□□□ -0.84
UPF3B-201ENST00000276201 ZMAT1Q5H9K5 638 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 PLEKHS1Q5SXH7 462 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 KLHL17Q6TDP4 642 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 FAM131AQ6UXB0 335 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 FAM151BQ6UXP7 276 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 SLC36A4Q6YBV0 504 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 OXR1Q8N573 874 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 DEFB119Q8N690 84 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 OR2A12Q8NGT7 310 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 TOE1Q96GM8 510 aaKnown RBP9.78□□□□□ -0.84
UPF3B-201ENST00000276201 MMP28Q9H239 520 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 ZFYVE1Q9HBF4 777 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 PARD6AQ9NPB6 346 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 IL26Q9NPH9 171 aa9.78□□□□□ -0.84
UPF3B-201ENST00000276201 MRPS18AQ9NVS2 196 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms