RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 KCNC4Q03721 635 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 ZP2Q05996 745 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 Q7L0L9 218 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 ZNF554Q86TJ5 538 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 UBALD2Q8IYN6 164 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 ARL14Q8N4G2 192 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 TRUB1Q8WWH5 349 aaKnown RBP14.42□□□□□ -0.1
SF3B4-201ENST00000271628 XAGE5Q8WWM1 108 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 TANKQ92844 425 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 RAB8BQ92930 207 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 KIF17Q9P2E2 1029 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 TRPC4Q9UBN4 977 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 SH3GLB1Q9Y371 365 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 NAALAD2Q9Y3Q0 740 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 FAM32AQ9Y421 112 aaKnown RBP14.42□□□□□ -0.1
SF3B4-201ENST00000271628 PCDHGB1Q9Y5G3 927 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 FOXD2O60548 495 aaPredicted RBP14.42□□□□□ -0.1
SF3B4-201ENST00000271628 JRKO75564 520 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 CLPXO76031 633 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 C8orf89P0DMQ9 161 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 OR12D1P0DN82 309 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 ITGAMP11215 1152 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 TYRP1P17643 537 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 ITIH1P19827 911 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 OR1E2P47887 323 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 CXCL12P48061 93 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 DAPP51397 102 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 BMXP51813 675 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 PRKAG1P54619 331 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 CTU2Q2VPK5 515 aaKnown RBP14.42□□□□□ -0.1
SF3B4-201ENST00000271628 SLC44A2Q8IWA5 706 aaPredicted RBP14.42□□□□□ -0.1
SF3B4-201ENST00000271628 SETD9Q8NE22 299 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 OR4K14Q8NGD5 310 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 GIPC3Q8TF64 312 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 FBLIM1Q8WUP2 373 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 MUL1Q969V5 352 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 C10orf90Q96M02 699 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 HSPA12BQ96MM6 686 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 NODALQ96S42 347 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 CCDC3Q9BQI4 270 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 SLC22A7Q9Y694 548 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 TNFRSF11BO00300 401 aa14.41□□□□□ -0.1
SF3B4-201ENST00000271628 SLC1A7O00341 560 aa14.41□□□□□ -0.1
SF3B4-201ENST00000271628 MAGEB3O15480 346 aa14.41□□□□□ -0.1
SF3B4-201ENST00000271628 SLC28A2O43868 658 aa14.41□□□□□ -0.1
SF3B4-201ENST00000271628 MFN2O95140 757 aa14.41□□□□□ -0.1
SF3B4-201ENST00000271628 IFNW1P05000 195 aa14.41□□□□□ -0.1
SF3B4-201ENST00000271628 HMGN2P05204 90 aaKnown RBP14.41□□□□□ -0.1
SF3B4-201ENST00000271628 HTR1AP08908 422 aa14.41□□□□□ -0.1
SF3B4-201ENST00000271628 CDH3P22223 829 aa14.41□□□□□ -0.1
SF3B4-201ENST00000271628 CRISP3P54108 245 aa14.41□□□□□ -0.1
SF3B4-201ENST00000271628 RUNX2Q13950 521 aa14.41□□□□□ -0.1
SF3B4-201ENST00000271628 DUSP7Q16829 419 aa14.41□□□□□ -0.1
SF3B4-201ENST00000271628 TMEM107Q6UX40 140 aa14.41□□□□□ -0.1
SF3B4-201ENST00000271628 CYP4Z1Q86W10 505 aa14.41□□□□□ -0.1
SF3B4-201ENST00000271628 ZNF761Q86XN6 746 aaPredicted RBP14.41□□□□□ -0.1
SF3B4-201ENST00000271628 KRT73Q86Y46 540 aa14.41□□□□□ -0.1
SF3B4-201ENST00000271628 LRRC25Q8N386 305 aaPredicted RBP14.41□□□□□ -0.1
SF3B4-201ENST00000271628 CSNK1A1LQ8N752 337 aa14.41□□□□□ -0.1
SF3B4-201ENST00000271628 ATG16L2Q8NAA4 619 aa14.41□□□□□ -0.1
SF3B4-201ENST00000271628 KLHL6Q8WZ60 621 aa14.41□□□□□ -0.1
SF3B4-201ENST00000271628 ELP4Q96EB1 424 aa14.41□□□□□ -0.1
SF3B4-201ENST00000271628 COX4I2Q96KJ9 171 aa14.41□□□□□ -0.1
SF3B4-201ENST00000271628 BCL7BQ9BQE9 202 aa14.41□□□□□ -0.1
SF3B4-201ENST00000271628 SPATA5L1Q9BVQ7 753 aa14.41□□□□□ -0.1
SF3B4-201ENST00000271628 SERHL2Q9H4I8 314 aa14.41□□□□□ -0.1
SF3B4-201ENST00000271628 EXD2Q9NVH0 621 aa14.41□□□□□ -0.1
SF3B4-201ENST00000271628 HSPE1-MOB4S4R3N1 261 aa14.41□□□□□ -0.1
SF3B4-201ENST00000271628 LILRA5A6NI73 299 aa14.4□□□□□ -0.1
SF3B4-201ENST00000271628 AQP9O43315 295 aa14.4□□□□□ -0.1
SF3B4-201ENST00000271628 PRAMEF10O60809 474 aa14.4□□□□□ -0.1
SF3B4-201ENST00000271628 HNRNPCP07910 306 aaKnown RBP eCLIP14.4□□□□□ -0.1
SF3B4-201ENST00000271628 NR2F1P10589 423 aa14.4□□□□□ -0.1
SF3B4-201ENST00000271628 RHCEP18577 417 aa14.4□□□□□ -0.1
SF3B4-201ENST00000271628 XKP51811 444 aa14.4□□□□□ -0.1
SF3B4-201ENST00000271628 MAZP56270 477 aaKnown RBP14.4□□□□□ -0.1
SF3B4-201ENST00000271628 NXPH1P58417 271 aa14.4□□□□□ -0.1
SF3B4-201ENST00000271628 DUSP2Q05923 314 aa14.4□□□□□ -0.1
SF3B4-201ENST00000271628 GPR19Q15760 415 aa14.4□□□□□ -0.1
SF3B4-201ENST00000271628 ZNF750Q32MQ0 723 aa14.4□□□□□ -0.1
SF3B4-201ENST00000271628 ANKRD34AQ69YU3 496 aa14.4□□□□□ -0.1
SF3B4-201ENST00000271628 LAIR2Q6ISS4 152 aa14.4□□□□□ -0.1
SF3B4-201ENST00000271628 DGLUCYQ7Z3D6 616 aa14.4□□□□□ -0.1
SF3B4-201ENST00000271628 ZNF438Q7Z4V0 828 aa14.4□□□□□ -0.1
SF3B4-201ENST00000271628 TSEN54Q7Z6J9 526 aaKnown RBP14.4□□□□□ -0.1
SF3B4-201ENST00000271628 NUP43Q8NFH3 380 aa14.4□□□□□ -0.1
SF3B4-201ENST00000271628 PROX1Q92786 737 aa14.4□□□□□ -0.1
SF3B4-201ENST00000271628 FKBP10Q96AY3 582 aa14.4□□□□□ -0.1
SF3B4-201ENST00000271628 GUCD1Q96NT3 240 aa14.4□□□□□ -0.1
SF3B4-201ENST00000271628 SLC38A3Q99624 504 aa14.4□□□□□ -0.1
SF3B4-201ENST00000271628 BARD1Q99728 777 aaKnown RBP14.4□□□□□ -0.1
SF3B4-201ENST00000271628 TREX2Q9BQ50 279 aaPredicted RBP14.4□□□□□ -0.1
SF3B4-201ENST00000271628 KRT84Q9NSB2 600 aa14.4□□□□□ -0.1
SF3B4-201ENST00000271628 WARS2Q9UGM6 360 aaKnown RBP14.4□□□□□ -0.1
SF3B4-201ENST00000271628 B3GNT3Q9Y2A9 372 aa14.4□□□□□ -0.1
SF3B4-201ENST00000271628 SIT1Q9Y3P8 196 aa14.4□□□□□ -0.1
SF3B4-201ENST00000271628 LYVE1Q9Y5Y7 322 aa14.4□□□□□ -0.1
SF3B4-201ENST00000271628 ENPP4Q9Y6X5 453 aa14.4□□□□□ -0.1
SF3B4-201ENST00000271628 SCN3AQ9NY46 2000 aa14.4□□□□□ -0.1
SF3B4-201ENST00000271628 A8MVJ9 347 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms