RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 SMIM10Q96HG1 83 aa23.11■■□□□ 1.29
SSBP4-201ENST00000270061 PKP2Q99959 881 aa23.11■■□□□ 1.29
SSBP4-201ENST00000270061 FAM117AQ9C073 453 aa23.11■■□□□ 1.29
SSBP4-201ENST00000270061 TAS2R9Q9NYW1 312 aa23.11■■□□□ 1.29
SSBP4-201ENST00000270061 A0A0G2JN53 185 aa23.1■■□□□ 1.29
SSBP4-201ENST00000270061 URADA6NGE7 173 aa23.1■■□□□ 1.29
SSBP4-201ENST00000270061 GSTA4O15217 222 aa23.1■■□□□ 1.29
SSBP4-201ENST00000270061 STATHP02808 62 aa23.1■■□□□ 1.29
SSBP4-201ENST00000270061 RPS18P62269 152 aaKnown RBP23.1■■□□□ 1.29
SSBP4-201ENST00000270061 SLAMF1Q13291 335 aa23.1■■□□□ 1.29
SSBP4-201ENST00000270061 CYP51A1Q16850 503 aa23.1■■□□□ 1.29
SSBP4-201ENST00000270061 OGFRL1Q5TC84 451 aaPredicted RBP23.1■■□□□ 1.29
SSBP4-201ENST00000270061 CPZQ66K79 652 aa23.1■■□□□ 1.29
SSBP4-201ENST00000270061 LCN10Q6JVE6 187 aa23.1■■□□□ 1.29
SSBP4-201ENST00000270061 APOBEC4Q8WW27 367 aaKnown RBP23.1■■□□□ 1.29
SSBP4-201ENST00000270061 ROGDIQ9GZN7 287 aa23.1■■□□□ 1.29
SSBP4-201ENST00000270061 ADNPQ9H2P0 1102 aa23.1■■□□□ 1.29
SSBP4-201ENST00000270061 TEX10Q9NXF1 929 aaPredicted RBP23.1■■□□□ 1.29
SSBP4-201ENST00000270061 POLHQ9Y253 713 aa23.1■■□□□ 1.29
SSBP4-201ENST00000270061 A0A0J9YVX5 310 aa23.09■■□□□ 1.29
SSBP4-201ENST00000270061 CDC14CA4D256 554 aa23.09■■□□□ 1.29
SSBP4-201ENST00000270061 HNRNPRO43390 633 aaKnown RBP23.09■■□□□ 1.29
SSBP4-201ENST00000270061 COL9A2Q14055 689 aaPredicted RBP23.09■■□□□ 1.29
SSBP4-201ENST00000270061 TRIP10Q15642 601 aa23.09■■□□□ 1.29
SSBP4-201ENST00000270061 ZC3H12BQ5HYM0 836 aaKnown RBP23.09■■□□□ 1.29
SSBP4-201ENST00000270061 ERICH5Q6P6B1 374 aa23.09■■□□□ 1.29
SSBP4-201ENST00000270061 ZNF655Q8N720 491 aaPredicted RBP23.09■■□□□ 1.29
SSBP4-201ENST00000270061 KCT2Q8NC54 265 aa23.09■■□□□ 1.29
SSBP4-201ENST00000270061 UTP15Q8TED0 518 aaKnown RBP23.09■■□□□ 1.29
SSBP4-201ENST00000270061 OR5P2Q8WZ92 322 aa23.09■■□□□ 1.29
SSBP4-201ENST00000270061 NLNQ9BYT8 704 aa23.09■■□□□ 1.29
SSBP4-201ENST00000270061 SRPK3Q9UPE1 567 aa23.09■■□□□ 1.29
SSBP4-201ENST00000270061 HELZ2Q9BYK8 2649 aaKnown RBP23.09■■□□□ 1.29
SSBP4-201ENST00000270061 GCN1Q92616 2671 aaKnown RBP23.09■■□□□ 1.29
SSBP4-201ENST00000270061 CXCR6O00574 342 aa23.09■■□□□ 1.29
SSBP4-201ENST00000270061 CTSBP07858 339 aa23.09■■□□□ 1.29
SSBP4-201ENST00000270061 RAB40ALP0C0E4 278 aa23.09■■□□□ 1.29
SSBP4-201ENST00000270061 AGXTP21549 392 aa23.09■■□□□ 1.29
SSBP4-201ENST00000270061 GAB1Q13480 694 aa23.09■■□□□ 1.29
SSBP4-201ENST00000270061 NDUFAF5Q5TEU4 345 aa23.09■■□□□ 1.29
SSBP4-201ENST00000270061 RHBDD2Q6NTF9 364 aa23.09■■□□□ 1.29
SSBP4-201ENST00000270061 MCATQ8IVS2 390 aaKnown RBP23.09■■□□□ 1.29
SSBP4-201ENST00000270061 TRIM4Q9C037 500 aa23.09■■□□□ 1.29
SSBP4-201ENST00000270061 KLHL4Q9C0H6 718 aa23.09■■□□□ 1.29
SSBP4-201ENST00000270061 LYARQ9NX58 379 aaKnown RBP23.09■■□□□ 1.29
SSBP4-201ENST00000270061 ANAPC2Q9UJX6 822 aa23.09■■□□□ 1.29
SSBP4-201ENST00000270061 MED13Q9UHV7 2174 aa23.08■■□□□ 1.29
SSBP4-201ENST00000270061 BAHCC1Q9P281 2608 aa23.08■■□□□ 1.29
SSBP4-201ENST00000270061 PDPK1O15530 556 aa23.08■■□□□ 1.29
SSBP4-201ENST00000270061 SOX11P35716 441 aa23.08■■□□□ 1.29
SSBP4-201ENST00000270061 ALDH9A1P49189 494 aa23.08■■□□□ 1.29
SSBP4-201ENST00000270061 MLC1Q15049 377 aa23.08■■□□□ 1.29
SSBP4-201ENST00000270061 CMPK2Q5EBM0 449 aa23.08■■□□□ 1.29
SSBP4-201ENST00000270061 TBCELQ5QJ74 424 aa23.08■■□□□ 1.29
SSBP4-201ENST00000270061 ADCY4Q8NFM4 1077 aa23.08■■□□□ 1.29
SSBP4-201ENST00000270061 DNAJC9Q8WXX5 260 aa23.08■■□□□ 1.29
SSBP4-201ENST00000270061 RERGQ96A58 199 aaPredicted RBP23.08■■□□□ 1.29
SSBP4-201ENST00000270061 NDC1Q9BTX1 674 aa23.08■■□□□ 1.29
SSBP4-201ENST00000270061 ACSS1Q9NUB1 689 aaPredicted RBP23.08■■□□□ 1.29
SSBP4-201ENST00000270061 NUP214P35658 2090 aaPredicted RBP23.07■■□□□ 1.28
SSBP4-201ENST00000270061 C9J4A7 227 aa23.07■■□□□ 1.28
SSBP4-201ENST00000270061 RAB8AP61006 207 aa23.07■■□□□ 1.28
SSBP4-201ENST00000270061 LPCAT4Q643R3 524 aa23.07■■□□□ 1.28
SSBP4-201ENST00000270061 ZNF385CQ66K41 422 aaPredicted RBP23.07■■□□□ 1.28
SSBP4-201ENST00000270061 FAM198BQ6UWH4 519 aa23.07■■□□□ 1.28
SSBP4-201ENST00000270061 CATSPER1Q8NEC5 780 aa23.07■■□□□ 1.28
SSBP4-201ENST00000270061 FIG4Q92562 907 aa23.07■■□□□ 1.28
SSBP4-201ENST00000270061 AURKCQ9UQB9 309 aa23.07■■□□□ 1.28
SSBP4-201ENST00000270061 H0YGG7 62 aa23.06■■□□□ 1.28
SSBP4-201ENST00000270061 P2RX6O15547 441 aa23.06■■□□□ 1.28
SSBP4-201ENST00000270061 C1QCP02747 245 aa23.06■■□□□ 1.28
SSBP4-201ENST00000270061 PEX2P28328 305 aa23.06■■□□□ 1.28
SSBP4-201ENST00000270061 ARF3P61204 181 aaPredicted RBP23.06■■□□□ 1.28
SSBP4-201ENST00000270061 KCNAB2Q13303 367 aa23.06■■□□□ 1.28
SSBP4-201ENST00000270061 RGNQ15493 299 aa23.06■■□□□ 1.28
SSBP4-201ENST00000270061 FRMPD2BQ6IN97 320 aa23.06■■□□□ 1.28
SSBP4-201ENST00000270061 LRTOMTQ8WZ04 291 aa23.06■■□□□ 1.28
SSBP4-201ENST00000270061 SLC35A5Q9BS91 424 aa23.06■■□□□ 1.28
SSBP4-201ENST00000270061 DHCR7Q9UBM7 475 aaKnown RBP23.06■■□□□ 1.28
SSBP4-201ENST00000270061 TUBD1Q9UJT1 453 aa23.06■■□□□ 1.28
SSBP4-201ENST00000270061 KCNMB2Q9Y691 235 aa23.06■■□□□ 1.28
SSBP4-201ENST00000270061 LOC105369274A0A096LPK9 316 aa23.06■■□□□ 1.28
SSBP4-201ENST00000270061 LOC102723532A0A0G2JNH3 316 aa23.06■■□□□ 1.28
SSBP4-201ENST00000270061 A0A1W2PR48 441 aa23.06■■□□□ 1.28
SSBP4-201ENST00000270061 ZNF888P0CJ79 500 aaPredicted RBP23.06■■□□□ 1.28
SSBP4-201ENST00000270061 FCGR1AP12314 374 aa23.06■■□□□ 1.28
SSBP4-201ENST00000270061 IL1RNP18510 177 aa23.06■■□□□ 1.28
SSBP4-201ENST00000270061 CERS1P27544 350 aa23.06■■□□□ 1.28
SSBP4-201ENST00000270061 BTN3A2P78410 334 aa23.06■■□□□ 1.28
SSBP4-201ENST00000270061 NFATC3Q12968 1075 aa23.06■■□□□ 1.28
SSBP4-201ENST00000270061 NCF4Q15080 339 aa23.06■■□□□ 1.28
SSBP4-201ENST00000270061 VMACQ2NL98 169 aa23.06■■□□□ 1.28
SSBP4-201ENST00000270061 C1orf189Q5VU69 101 aa23.06■■□□□ 1.28
SSBP4-201ENST00000270061 PTOV1Q86YD1 416 aa23.06■■□□□ 1.28
SSBP4-201ENST00000270061 KBTBD2Q8IY47 623 aa23.06■■□□□ 1.28
SSBP4-201ENST00000270061 ZZZ3Q8IYH5 903 aa23.06■■□□□ 1.28
SSBP4-201ENST00000270061 OR4N4Q8N0Y3 316 aa23.06■■□□□ 1.28
SSBP4-201ENST00000270061 OR52N2Q8NGI0 321 aa23.06■■□□□ 1.28
SSBP4-201ENST00000270061 PSMA8Q8TAA3 256 aa23.06■■□□□ 1.28
SSBP4-201ENST00000270061 ZBED6CLQ96FA7 236 aaPredicted RBP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms