RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 IGFL2Q6UWQ7 119 aa11.85□□□□□ -0.51
SS18-202ENST00000269138 RNF111Q6ZNA4 994 aa11.85□□□□□ -0.51
SS18-202ENST00000269138 ACAD11Q709F0 780 aa11.85□□□□□ -0.51
SS18-202ENST00000269138 FAM9CQ8IZT9 166 aa11.85□□□□□ -0.51
SS18-202ENST00000269138 BEST3Q8N1M1 668 aa11.85□□□□□ -0.51
SS18-202ENST00000269138 VWA5B2Q8N398 1253 aa11.85□□□□□ -0.51
SS18-202ENST00000269138 SLC5A8Q8N695 610 aa11.85□□□□□ -0.51
SS18-202ENST00000269138 ZNF615Q8N8J6 731 aa11.85□□□□□ -0.51
SS18-202ENST00000269138 SLC39A7Q92504 469 aa11.85□□□□□ -0.51
SS18-202ENST00000269138 COQ8BQ96D53 544 aa11.85□□□□□ -0.51
SS18-202ENST00000269138 ART5Q96L15 291 aa11.85□□□□□ -0.51
SS18-202ENST00000269138 ZNF354BQ96LW1 612 aa11.85□□□□□ -0.51
SS18-202ENST00000269138 LMF1Q96S06 567 aa11.85□□□□□ -0.51
SS18-202ENST00000269138 MFRPQ9BY79 579 aa11.85□□□□□ -0.51
SS18-202ENST00000269138 DPY30Q9C005 99 aa11.85□□□□□ -0.51
SS18-202ENST00000269138 TCF7L2Q9NQB0 619 aa11.85□□□□□ -0.51
SS18-202ENST00000269138 E9PBE3 544 aa11.84□□□□□ -0.51
SS18-202ENST00000269138 WWP2O00308 870 aa11.84□□□□□ -0.51
SS18-202ENST00000269138 UBDO15205 165 aa11.84□□□□□ -0.51
SS18-202ENST00000269138 KLHL41O60662 606 aa11.84□□□□□ -0.51
SS18-202ENST00000269138 WDPCPO95876 746 aa11.84□□□□□ -0.51
SS18-202ENST00000269138 PRB1P04280 392 aa11.84□□□□□ -0.51
SS18-202ENST00000269138 SFTPCP11686 197 aa11.84□□□□□ -0.51
SS18-202ENST00000269138 IL12AP29459 219 aa11.84□□□□□ -0.51
SS18-202ENST00000269138 FRKP42685 505 aaPredicted RBP11.84□□□□□ -0.51
SS18-202ENST00000269138 FHL5Q5TD97 284 aa11.84□□□□□ -0.51
SS18-202ENST00000269138 C6orf163Q5TEZ5 329 aa11.84□□□□□ -0.51
SS18-202ENST00000269138 ZNF468Q5VIY5 522 aaPredicted RBP11.84□□□□□ -0.51
SS18-202ENST00000269138 PTRH1Q86Y79 214 aaKnown RBP11.84□□□□□ -0.51
SS18-202ENST00000269138 RBMXL3Q8N7X1 1067 aaKnown RBP11.84□□□□□ -0.51
SS18-202ENST00000269138 CATSPER1Q8NEC5 780 aa11.84□□□□□ -0.51
SS18-202ENST00000269138 OR7G2Q8NG99 324 aa11.84□□□□□ -0.51
SS18-202ENST00000269138 ZNF675Q8TD23 568 aa11.84□□□□□ -0.51
SS18-202ENST00000269138 ZNF317Q96PQ6 595 aaPredicted RBP11.84□□□□□ -0.51
SS18-202ENST00000269138 CCDC28BQ9BUN5 200 aa11.84□□□□□ -0.51
SS18-202ENST00000269138 OR10A5Q9H207 317 aa11.84□□□□□ -0.51
SS18-202ENST00000269138 ANKRD10Q9NXR5 420 aa11.84□□□□□ -0.51
SS18-202ENST00000269138 BCAP29Q9UHQ4 241 aa11.84□□□□□ -0.51
SS18-202ENST00000269138 PCDHGB7Q9Y5F8 929 aa11.84□□□□□ -0.51
SS18-202ENST00000269138 CROCCQ5TZA2 2017 aa11.83□□□□□ -0.52
SS18-202ENST00000269138 POLR3GO15318 223 aaPredicted RBP11.83□□□□□ -0.52
SS18-202ENST00000269138 ZNF354AO60765 605 aaPredicted RBP11.83□□□□□ -0.52
SS18-202ENST00000269138 RPL3P39023 403 aaKnown RBP11.83□□□□□ -0.52
SS18-202ENST00000269138 MC3RP41968 323 aa11.83□□□□□ -0.52
SS18-202ENST00000269138 CDK9P50750 372 aaKnown RBP11.83□□□□□ -0.52
SS18-202ENST00000269138 WNT3P56703 355 aa11.83□□□□□ -0.52
SS18-202ENST00000269138 PHC1P78364 1004 aa11.83□□□□□ -0.52
SS18-202ENST00000269138 HSPB3Q12988 150 aa11.83□□□□□ -0.52
SS18-202ENST00000269138 MEP1AQ16819 746 aa11.83□□□□□ -0.52
SS18-202ENST00000269138 OR4F3Q6IEY1 312 aa11.83□□□□□ -0.52
SS18-202ENST00000269138 TMEM107Q6UX40 140 aa11.83□□□□□ -0.52
SS18-202ENST00000269138 IGFL3Q6UXB1 125 aa11.83□□□□□ -0.52
SS18-202ENST00000269138 ARMC10Q8N2F6 343 aa11.83□□□□□ -0.52
SS18-202ENST00000269138 LSM14AQ8ND56 463 aaKnown RBP11.83□□□□□ -0.52
SS18-202ENST00000269138 OR7G1Q8NGA0 311 aa11.83□□□□□ -0.52
SS18-202ENST00000269138 OR52R1Q8NGF1 315 aa11.83□□□□□ -0.52
SS18-202ENST00000269138 OR8K3Q8NH51 312 aa11.83□□□□□ -0.52
SS18-202ENST00000269138 C16orf52Q8NHV5 167 aa11.83□□□□□ -0.52
SS18-202ENST00000269138 MAGED4Q96JG8 741 aa11.83□□□□□ -0.52
SS18-202ENST00000269138 PRPF18Q99633 342 aaKnown RBP11.83□□□□□ -0.52
SS18-202ENST00000269138 DUSP26Q9BV47 211 aa11.83□□□□□ -0.52
SS18-202ENST00000269138 MYOTQ9UBF9 498 aa11.83□□□□□ -0.52
SS18-202ENST00000269138 TEKT2Q9UIF3 430 aa11.83□□□□□ -0.52
SS18-202ENST00000269138 DTX4Q9Y2E6 619 aa11.83□□□□□ -0.52
SS18-202ENST00000269138 CHD6Q8TD26 2715 aa11.83□□□□□ -0.52
SS18-202ENST00000269138 A0A0G2JND7 137 aa11.82□□□□□ -0.52
SS18-202ENST00000269138 A0A1W2PRB8 838 aa11.82□□□□□ -0.52
SS18-202ENST00000269138 PLOD3O60568 738 aa11.82□□□□□ -0.52
SS18-202ENST00000269138 OR2J2O76002 312 aa11.82□□□□□ -0.52
SS18-202ENST00000269138 IDO1P14902 403 aa11.82□□□□□ -0.52
SS18-202ENST00000269138 CD96P40200 585 aa11.82□□□□□ -0.52
SS18-202ENST00000269138 EMDP50402 254 aa11.82□□□□□ -0.52
SS18-202ENST00000269138 DGKQP52824 942 aa11.82□□□□□ -0.52
SS18-202ENST00000269138 MANFP55145 182 aaKnown RBP11.82□□□□□ -0.52
SS18-202ENST00000269138 EBPQ15125 230 aaKnown RBP11.82□□□□□ -0.52
SS18-202ENST00000269138 RPS6KA2Q15349 733 aa11.82□□□□□ -0.52
SS18-202ENST00000269138 NADK2Q4G0N4 442 aa11.82□□□□□ -0.52
SS18-202ENST00000269138 PDCD4Q53EL6 469 aaKnown RBP11.82□□□□□ -0.52
SS18-202ENST00000269138 SPANXN4Q5MJ08 99 aa11.82□□□□□ -0.52
SS18-202ENST00000269138 SLC29A4Q7RTT9 530 aa11.82□□□□□ -0.52
SS18-202ENST00000269138 CAMKMTQ7Z624 323 aa11.82□□□□□ -0.52
SS18-202ENST00000269138 ZADH2Q8N4Q0 377 aa11.82□□□□□ -0.52
SS18-202ENST00000269138 OR5L2Q8NGL0 311 aa11.82□□□□□ -0.52
SS18-202ENST00000269138 HAS2Q92819 552 aa11.82□□□□□ -0.52
SS18-202ENST00000269138 ELP4Q96EB1 424 aa11.82□□□□□ -0.52
SS18-202ENST00000269138 ZBED6CLQ96FA7 236 aaPredicted RBP11.82□□□□□ -0.52
SS18-202ENST00000269138 GAL3ST4Q96RP7 486 aa11.82□□□□□ -0.52
SS18-202ENST00000269138 BHLHE41Q9C0J9 482 aaPredicted RBP11.82□□□□□ -0.52
SS18-202ENST00000269138 WWTR1Q9GZV5 400 aa11.82□□□□□ -0.52
SS18-202ENST00000269138 CLMPQ9H6B4 373 aa11.82□□□□□ -0.52
SS18-202ENST00000269138 EPS8L2Q9H6S3 715 aa11.82□□□□□ -0.52
SS18-202ENST00000269138 ACSS1Q9NUB1 689 aaPredicted RBP11.82□□□□□ -0.52
SS18-202ENST00000269138 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.82□□□□□ -0.52
SS18-202ENST00000269138 FAM53CQ9NYF3 392 aa11.82□□□□□ -0.52
SS18-202ENST00000269138 TLN1Q9Y490 2541 aaKnown RBP11.82□□□□□ -0.52
SS18-202ENST00000269138 OR6C76A6NM76 312 aa11.81□□□□□ -0.52
SS18-202ENST00000269138 UPK1AO00322 258 aa11.81□□□□□ -0.52
SS18-202ENST00000269138 PLOD2O00469 737 aa11.81□□□□□ -0.52
SS18-202ENST00000269138 DPM1O60762 260 aa11.81□□□□□ -0.52
SS18-202ENST00000269138 ITGA10O75578 1167 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms