RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 ISCA2Q86U28 154 aa16.06■□□□□ 0.16
CROCCP3-201ENST00000263511 DOK4Q8TEW6 326 aa16.06■□□□□ 0.16
CROCCP3-201ENST00000263511 ECHDC3Q96DC8 303 aa16.06■□□□□ 0.16
CROCCP3-201ENST00000263511 CPEB1Q9BZB8 566 aaKnown RBP16.06■□□□□ 0.16
CROCCP3-201ENST00000263511 ZNF700Q9H0M5 742 aa16.06■□□□□ 0.16
CROCCP3-201ENST00000263511 NPIPB15A6NHN6 443 aaPredicted RBP16.06■□□□□ 0.16
CROCCP3-201ENST00000263511 POLR1CO15160 346 aaPredicted RBP16.06■□□□□ 0.16
CROCCP3-201ENST00000263511 SEC14L5O43304 696 aa16.06■□□□□ 0.16
CROCCP3-201ENST00000263511 NUDT1P36639 197 aa16.06■□□□□ 0.16
CROCCP3-201ENST00000263511 WNT7BP56706 349 aa16.06■□□□□ 0.16
CROCCP3-201ENST00000263511 HNRNPA0Q13151 305 aaKnown RBP16.06■□□□□ 0.16
CROCCP3-201ENST00000263511 NDUFAF5Q5TEU4 345 aa16.06■□□□□ 0.16
CROCCP3-201ENST00000263511 ZNF517Q6ZMY9 492 aaPredicted RBP16.06■□□□□ 0.16
CROCCP3-201ENST00000263511 MAMDC2Q7Z304 686 aaPredicted RBP16.06■□□□□ 0.16
CROCCP3-201ENST00000263511 CPXM2Q8N436 756 aa16.06■□□□□ 0.16
CROCCP3-201ENST00000263511 CASD1Q96PB1 797 aa16.06■□□□□ 0.16
CROCCP3-201ENST00000263511 NEDD4LQ96PU5 975 aa16.06■□□□□ 0.16
CROCCP3-201ENST00000263511 SERINC2Q96SA4 455 aa16.06■□□□□ 0.16
CROCCP3-201ENST00000263511 URM1Q9BTM9 101 aaKnown RBP16.06■□□□□ 0.16
CROCCP3-201ENST00000263511 KCNK12Q9HB15 430 aa16.06■□□□□ 0.16
CROCCP3-201ENST00000263511 IL26Q9NPH9 171 aa16.06■□□□□ 0.16
CROCCP3-201ENST00000263511 RXFP3Q9NSD7 469 aa16.06■□□□□ 0.16
CROCCP3-201ENST00000263511 IL17CQ9P0M4 197 aa16.06■□□□□ 0.16
CROCCP3-201ENST00000263511 ACSL6Q9UKU0 697 aa16.06■□□□□ 0.16
CROCCP3-201ENST00000263511 TTLL8A6PVC2 850 aa16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 ARSAP15289 507 aa16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 PGGT1BP53609 377 aa16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 GRIN2CQ14957 1233 aa16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 LRFN4Q6PJG9 635 aa16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 ZNF761Q86XN6 746 aaPredicted RBP16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 RBM12BQ8IXT5 1001 aaKnown RBP16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 SEC14L1Q92503 715 aa16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 DNAJA3Q96EY1 480 aa16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 MAGIXQ9H6Y5 334 aa16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 MTHFD2LQ9H903 347 aaPredicted RBP16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 HCFC1R1Q9NWW0 138 aa16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 DLG5Q8TDM6 1919 aa16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 VNN2O95498 520 aa16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 CLIC3O95833 236 aa16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 FCER2P06734 321 aa16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 MPP7Q5T2T1 576 aa16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 GTF2IRD2BQ6EKJ0 949 aa16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 GTF2IRD2Q86UP8 949 aa16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 OR52N2Q8NGI0 321 aa16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 NEIL3Q8TAT5 605 aa16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 CRYGNQ8WXF5 182 aa16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 ACTRT3Q9BYD9 372 aa16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 MTG2Q9H4K7 406 aa16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 SPO11Q9Y5K1 396 aa16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 SMIM30A4D0T7 59 aa16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 A6NLC8 198 aa16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 RASAL1O95294 804 aa16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 IFNA7P01567 189 aa16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 MT-ND2P03891 347 aa16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 STOMP27105 288 aa16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 ACTA2P62736 377 aa16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 ACTG2P63267 376 aa16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 DEFB110Q30KQ9 67 aa16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 MTMR10Q9NXD2 777 aa16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 SNAP29O95721 258 aa16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 C7P10643 843 aa16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 RBMXP38159 391 aaKnown RBP16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 RIDAP52758 137 aaKnown RBP16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 CDKL4Q5MAI5 379 aa16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 ABHD17BQ5VST6 288 aa16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 KIAA0895LQ68EN5 471 aa16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 ISG20Q96AZ6 181 aaKnown RBP16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 TMEM19Q96HH6 336 aa16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 KLF16Q9BXK1 252 aaPredicted RBP16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 KLHL21Q9UJP4 597 aa16.05■□□□□ 0.16
CROCCP3-201ENST00000263511 OR6C70A6NIJ9 312 aa16.04■□□□□ 0.16
CROCCP3-201ENST00000263511 FRKP42685 505 aaPredicted RBP16.04■□□□□ 0.16
CROCCP3-201ENST00000263511 DEFB103AP81534 67 aa16.04■□□□□ 0.16
CROCCP3-201ENST00000263511 ZNF252P-AS1Q0IIN9 211 aa16.04■□□□□ 0.16
CROCCP3-201ENST00000263511 ECH1Q13011 328 aa16.04■□□□□ 0.16
CROCCP3-201ENST00000263511 LRP8Q14114 963 aa16.04■□□□□ 0.16
CROCCP3-201ENST00000263511 CHRFAM7AQ494W8 412 aa16.04■□□□□ 0.16
CROCCP3-201ENST00000263511 KCTD9Q7L273 389 aa16.04■□□□□ 0.16
CROCCP3-201ENST00000263511 FCAMRQ8WWV6 532 aa16.04■□□□□ 0.16
CROCCP3-201ENST00000263511 C12orf43Q96C57 262 aaKnown RBP16.04■□□□□ 0.16
CROCCP3-201ENST00000263511 KATNBL1Q9H079 304 aa16.04■□□□□ 0.16
CROCCP3-201ENST00000263511 A8MVJ9 347 aa16.04■□□□□ 0.16
CROCCP3-201ENST00000263511 UGDHO60701 494 aa16.04■□□□□ 0.16
CROCCP3-201ENST00000263511 PRSS56P0CW18 603 aa16.04■□□□□ 0.16
CROCCP3-201ENST00000263511 CD68P34810 354 aaPredicted RBP16.04■□□□□ 0.16
CROCCP3-201ENST00000263511 TM4SF4P48230 202 aa16.04■□□□□ 0.16
CROCCP3-201ENST00000263511 SOX9P48436 509 aa16.04■□□□□ 0.16
CROCCP3-201ENST00000263511 SH3BP2P78314 561 aa16.04■□□□□ 0.16
CROCCP3-201ENST00000263511 GALNT1Q10472 559 aaPredicted RBP16.04■□□□□ 0.16
CROCCP3-201ENST00000263511 Q6ZSR6 202 aa16.04■□□□□ 0.16
CROCCP3-201ENST00000263511 BEND4Q6ZU67 534 aa16.04■□□□□ 0.16
CROCCP3-201ENST00000263511 HTR3DQ70Z44 454 aa16.04■□□□□ 0.16
CROCCP3-201ENST00000263511 DPPA4Q7L190 304 aa16.04■□□□□ 0.16
CROCCP3-201ENST00000263511 TEX26Q8N6G2 289 aa16.04■□□□□ 0.16
CROCCP3-201ENST00000263511 SAMD12Q8N8I0 201 aa16.04■□□□□ 0.16
CROCCP3-201ENST00000263511 SLC37A3Q8NCC5 494 aa16.04■□□□□ 0.16
CROCCP3-201ENST00000263511 OR5AR1Q8NGP9 310 aa16.04■□□□□ 0.16
CROCCP3-201ENST00000263511 CREB3L4Q8TEY5 395 aa16.04■□□□□ 0.16
CROCCP3-201ENST00000263511 HPF1Q9NWY4 346 aa16.04■□□□□ 0.16
CROCCP3-201ENST00000263511 GJE1A6NN92 205 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms