RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 OR4C11Q6IEV9 310 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 BORAQ6PGQ7 559 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 BAIAP2L2Q6UXY1 529 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 C7orf57Q8NEG2 295 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 THAP4Q8WY91 577 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 ATOH8Q96SQ7 321 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 OR2B2Q9GZK3 357 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 BRF2Q9HAW0 419 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 HEBP1Q9NRV9 189 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 STRCQ7RTU9 1775 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 HYKKA2RU49 373 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 H3BSH0 61 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 PCDH17O14917 1159 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 RNF13O43567 381 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 CNMDO75829 334 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 OR2B3O76000 313 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 RNH1P13489 461 aaKnown RBP10.25□□□□□ -0.77
CD44-201ENST00000263398 SDC1P18827 310 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 EIF1AXP47813 144 aaKnown RBP10.25□□□□□ -0.77
CD44-201ENST00000263398 PKDCCQ504Y2 493 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 CPZQ66K79 652 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 PGM2L1Q6PCE3 622 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 AMIGO1Q86WK6 493 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 TMEM25Q86YD3 366 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 OR8K5Q8NH50 307 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 ITFG2Q969R8 447 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 METTL2AQ96IZ6 378 aaKnown RBP10.25□□□□□ -0.77
CD44-201ENST00000263398 PTCHD1Q96NR3 888 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 ORAI3Q9BRQ5 295 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 NTMT1Q9BV86 223 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 HDHD5Q9BXW7 423 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 RANBP3Q9H6Z4 567 aaPredicted RBP10.25□□□□□ -0.77
CD44-201ENST00000263398 PTGES2Q9H7Z7 377 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 CD93Q9NPY3 652 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 HPF1Q9NWY4 346 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 ALKBH4Q9NXW9 302 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 RIMS3Q9UJD0 308 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 NUP50Q9UKX7 468 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 HCRTR2O43614 444 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 LCKP06239 509 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 DNASE1P24855 282 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 NAA10P41227 235 aaPredicted RBP10.25□□□□□ -0.77
CD44-201ENST00000263398 MAGEA8P43361 318 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 ARHGAP11AQ6P4F7 1023 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 HMGN2P46Q86SG4 172 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 OR8K3Q8NH51 312 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 PNPLA2Q96AD5 504 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 ZNF300Q96RE9 604 aaPredicted RBP10.25□□□□□ -0.77
CD44-201ENST00000263398 PELOQ9BRX2 385 aaKnown RBP10.25□□□□□ -0.77
CD44-201ENST00000263398 MROQ9BYG7 248 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 POTEKPQ9BYX7 375 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 GORASP2Q9H8Y8 452 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 KLHL42Q9P2K6 505 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 USP3Q9Y6I4 520 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 SIPA1L3O60292 1781 aaPredicted RBP10.25□□□□□ -0.77
CD44-201ENST00000263398 TEX13DA0A0J9YY54 714 aaPredicted RBP10.25□□□□□ -0.77
CD44-201ENST00000263398 C13orf42A0A1B0GVH6 325 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 IGLON5A6NGN9 336 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 EIF1AYO14602 144 aaKnown RBP10.25□□□□□ -0.77
CD44-201ENST00000263398 TNFRSF10BO14763 440 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 FCER2P06734 321 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 KLK3P07288 261 aaPredicted RBP10.25□□□□□ -0.77
CD44-201ENST00000263398 ZNF140P52738 457 aaPredicted RBP10.25□□□□□ -0.77
CD44-201ENST00000263398 PDX1P52945 283 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 ACTA2P62736 377 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 ACTG2P63267 376 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 NFE2L1Q14494 772 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 MICAQ29983 383 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 GXYLT1Q4G148 440 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 RAB41Q5JT25 222 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 TMEM69Q5SWH9 247 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 RAB12Q6IQ22 244 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 TRNP1Q6NT89 227 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 PNCKQ6P2M8 343 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 SERPINA11Q86U17 422 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 KLHDC8AQ8IYD2 350 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 CHST14Q8NCH0 376 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 LMX1AQ8TE12 382 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 SGTBQ96EQ0 304 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 C3orf30Q96M34 536 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 NPLQ9BXD5 320 aaPredicted RBP10.25□□□□□ -0.77
CD44-201ENST00000263398 METTL7AQ9H8H3 244 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 ACOT13Q9NPJ3 140 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 DZANK1Q9NVP4 752 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 PLEKHA6Q9Y2H5 1048 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 PCDHGA3Q9Y5H0 932 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 LAMA4Q16363 1823 aa10.25□□□□□ -0.77
CD44-201ENST00000263398 TRBV2A0A0J9YWF9 115 aa10.24□□□□□ -0.77
CD44-201ENST00000263398 FEZF1A0PJY2 475 aa10.24□□□□□ -0.77
CD44-201ENST00000263398 NPIPB15A6NHN6 443 aaPredicted RBP10.24□□□□□ -0.77
CD44-201ENST00000263398 PPP6CO00743 305 aa10.24□□□□□ -0.77
CD44-201ENST00000263398 IL7P13232 177 aa10.24□□□□□ -0.77
CD44-201ENST00000263398 PVALBP20472 110 aaPredicted RBP10.24□□□□□ -0.77
CD44-201ENST00000263398 CBLP22681 906 aa10.24□□□□□ -0.77
CD44-201ENST00000263398 AK4P27144 223 aaPredicted RBP10.24□□□□□ -0.77
CD44-201ENST00000263398 RPA4Q13156 261 aa10.24□□□□□ -0.77
CD44-201ENST00000263398 SNTA1Q13424 505 aa10.24□□□□□ -0.77
CD44-201ENST00000263398 IER5LQ5T953 404 aa10.24□□□□□ -0.77
CD44-201ENST00000263398 TCEAL8Q8IYN2 117 aa10.24□□□□□ -0.77
CD44-201ENST00000263398 OR2L2Q8NH16 312 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms