RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 SLC13A2Q13183 592 aa21.44■■□□□ 1.02
SMARCB1-201ENST00000263121 LASP1Q14847 261 aaKnown RBP21.44■■□□□ 1.02
SMARCB1-201ENST00000263121 MAPK11Q15759 364 aa21.44■■□□□ 1.02
SMARCB1-201ENST00000263121 LPCAT4Q643R3 524 aa21.44■■□□□ 1.02
SMARCB1-201ENST00000263121 EIF3MQ7L2H7 374 aaKnown RBP21.44■■□□□ 1.02
SMARCB1-201ENST00000263121 SLC38A5Q8WUX1 472 aa21.44■■□□□ 1.02
SMARCB1-201ENST00000263121 SLC47A1Q96FL8 570 aa21.44■■□□□ 1.02
SMARCB1-201ENST00000263121 MS4A4EQ96PG1 132 aa21.44■■□□□ 1.02
SMARCB1-201ENST00000263121 TACO1Q9BSH4 297 aaKnown RBP21.44■■□□□ 1.02
SMARCB1-201ENST00000263121 EDEM2Q9BV94 578 aa21.44■■□□□ 1.02
SMARCB1-201ENST00000263121 LANCL2Q9NS86 450 aa21.44■■□□□ 1.02
SMARCB1-201ENST00000263121 MAT2BQ9NZL9 334 aa21.44■■□□□ 1.02
SMARCB1-201ENST00000263121 ANGPT4Q9Y264 503 aa21.44■■□□□ 1.02
SMARCB1-201ENST00000263121 TPST1O60507 370 aa21.44■■□□□ 1.02
SMARCB1-201ENST00000263121 CDC123O75794 336 aaPredicted RBP21.44■■□□□ 1.02
SMARCB1-201ENST00000263121 OR12D1P0DN82 309 aa21.44■■□□□ 1.02
SMARCB1-201ENST00000263121 HOXB6P17509 224 aaKnown RBP21.44■■□□□ 1.02
SMARCB1-201ENST00000263121 NT5EP21589 574 aa21.44■■□□□ 1.02
SMARCB1-201ENST00000263121 FASP25445 335 aa21.44■■□□□ 1.02
SMARCB1-201ENST00000263121 AQP1P29972 269 aa21.44■■□□□ 1.02
SMARCB1-201ENST00000263121 MAN2A2P49641 1150 aa21.44■■□□□ 1.02
SMARCB1-201ENST00000263121 ANXA11P50995 505 aaKnown RBP21.44■■□□□ 1.02
SMARCB1-201ENST00000263121 TCF15Q12870 199 aa21.44■■□□□ 1.02
SMARCB1-201ENST00000263121 RHBDD2Q6NTF9 364 aa21.44■■□□□ 1.02
SMARCB1-201ENST00000263121 B3GNT8Q7Z7M8 397 aa21.44■■□□□ 1.02
SMARCB1-201ENST00000263121 LGI4Q8N135 537 aa21.44■■□□□ 1.02
SMARCB1-201ENST00000263121 OR5D16Q8NGK9 328 aa21.44■■□□□ 1.02
SMARCB1-201ENST00000263121 PPWD1Q96BP3 646 aaKnown RBP21.44■■□□□ 1.02
SMARCB1-201ENST00000263121 CTHRC1Q96CG8 243 aa21.44■■□□□ 1.02
SMARCB1-201ENST00000263121 C16orf58Q96GQ5 468 aa21.44■■□□□ 1.02
SMARCB1-201ENST00000263121 OR1F2PQ96R84 312 aa21.44■■□□□ 1.02
SMARCB1-201ENST00000263121 ZNF304Q9HCX3 659 aa21.44■■□□□ 1.02
SMARCB1-201ENST00000263121 RARRES3Q9UL19 164 aa21.44■■□□□ 1.02
SMARCB1-201ENST00000263121 C19orf53Q9UNZ5 99 aaPredicted RBP21.44■■□□□ 1.02
SMARCB1-201ENST00000263121 COL27A1Q8IZC6 1860 aaPredicted RBP21.43■■□□□ 1.02
SMARCB1-201ENST00000263121 PLOD3O60568 738 aa21.43■■□□□ 1.02
SMARCB1-201ENST00000263121 FBLP22087 321 aaKnown RBP21.43■■□□□ 1.02
SMARCB1-201ENST00000263121 BTG2P78543 158 aa21.43■■□□□ 1.02
SMARCB1-201ENST00000263121 ELOAQ14241 798 aaKnown RBP21.43■■□□□ 1.02
SMARCB1-201ENST00000263121 TRMT12Q53H54 448 aaKnown RBP21.43■■□□□ 1.02
SMARCB1-201ENST00000263121 CRB2Q5IJ48 1285 aa21.43■■□□□ 1.02
SMARCB1-201ENST00000263121 REEP3Q6NUK4 255 aa21.43■■□□□ 1.02
SMARCB1-201ENST00000263121 AMIGO2Q86SJ2 522 aa21.43■■□□□ 1.02
SMARCB1-201ENST00000263121 NAXDQ8IW45 347 aa21.43■■□□□ 1.02
SMARCB1-201ENST00000263121 ST13P4Q8IZP2 240 aaPredicted RBP21.43■■□□□ 1.02
SMARCB1-201ENST00000263121 TRPC4Q9UBN4 977 aa21.43■■□□□ 1.02
SMARCB1-201ENST00000263121 PRAMEF27A3QJZ7 478 aa21.42■■□□□ 1.02
SMARCB1-201ENST00000263121 TMEM229AB2RXF0 380 aa21.42■■□□□ 1.02
SMARCB1-201ENST00000263121 ASNA1O43681 348 aa21.42■■□□□ 1.02
SMARCB1-201ENST00000263121 JRKO75564 520 aa21.42■■□□□ 1.02
SMARCB1-201ENST00000263121 ZNF682O95780 498 aa21.42■■□□□ 1.02
SMARCB1-201ENST00000263121 BCHEP06276 602 aa21.42■■□□□ 1.02
SMARCB1-201ENST00000263121 PDX1P52945 283 aa21.42■■□□□ 1.02
SMARCB1-201ENST00000263121 SPEM2Q0P670 501 aa21.42■■□□□ 1.02
SMARCB1-201ENST00000263121 STX4Q12846 297 aa21.42■■□□□ 1.02
SMARCB1-201ENST00000263121 ATP6AP1Q15904 470 aa21.42■■□□□ 1.02
SMARCB1-201ENST00000263121 MFSD12Q6NUT3 480 aa21.42■■□□□ 1.02
SMARCB1-201ENST00000263121 DGAT2L6Q6ZPD8 337 aa21.42■■□□□ 1.02
SMARCB1-201ENST00000263121 METTL25Q8N6Q8 603 aa21.42■■□□□ 1.02
SMARCB1-201ENST00000263121 SIMC1Q8NDZ2 872 aa21.42■■□□□ 1.02
SMARCB1-201ENST00000263121 PRSS33Q8NF86 280 aa21.42■■□□□ 1.02
SMARCB1-201ENST00000263121 TMEM19Q96HH6 336 aa21.42■■□□□ 1.02
SMARCB1-201ENST00000263121 YIPF4Q9BSR8 244 aa21.42■■□□□ 1.02
SMARCB1-201ENST00000263121 ACTRT3Q9BYD9 372 aa21.42■■□□□ 1.02
SMARCB1-201ENST00000263121 SEMA6AQ9H2E6 1030 aa21.42■■□□□ 1.02
SMARCB1-201ENST00000263121 TMEM9BQ9NQ34 198 aa21.42■■□□□ 1.02
SMARCB1-201ENST00000263121 P2RX2Q9UBL9 471 aa21.42■■□□□ 1.02
SMARCB1-201ENST00000263121 ZNF451Q9Y4E5 1061 aa21.42■■□□□ 1.02
SMARCB1-201ENST00000263121 PEX1O43933 1283 aa21.41■■□□□ 1.02
SMARCB1-201ENST00000263121 OR10H2O60403 315 aa21.41■■□□□ 1.02
SMARCB1-201ENST00000263121 CBFA2T3O75081 653 aa21.41■■□□□ 1.02
SMARCB1-201ENST00000263121 BMP10O95393 424 aa21.41■■□□□ 1.02
SMARCB1-201ENST00000263121 TIAF1O95411 115 aa21.41■■□□□ 1.02
SMARCB1-201ENST00000263121 MT-ND1P03886 318 aa21.41■■□□□ 1.02
SMARCB1-201ENST00000263121 SEMG1P04279 462 aa21.41■■□□□ 1.02
SMARCB1-201ENST00000263121 CT62P0C5K7 136 aa21.41■■□□□ 1.02
SMARCB1-201ENST00000263121 CYBRD1Q53TN4 286 aa21.41■■□□□ 1.02
SMARCB1-201ENST00000263121 C1orf189Q5VU69 101 aa21.41■■□□□ 1.02
SMARCB1-201ENST00000263121 KBTBD2Q8IY47 623 aa21.41■■□□□ 1.02
SMARCB1-201ENST00000263121 OR10Q1Q8NGQ4 319 aa21.41■■□□□ 1.02
SMARCB1-201ENST00000263121 XAGE5Q8WWM1 108 aa21.41■■□□□ 1.02
SMARCB1-201ENST00000263121 TAMM41Q96BW9 452 aa21.41■■□□□ 1.02
SMARCB1-201ENST00000263121 OR7D2Q96RA2 312 aa21.41■■□□□ 1.02
SMARCB1-201ENST00000263121 COL25A1Q9BXS0 654 aaPredicted RBP21.41■■□□□ 1.02
SMARCB1-201ENST00000263121 ALOXE3Q9BYJ1 711 aa21.41■■□□□ 1.02
SMARCB1-201ENST00000263121 VCX3BQ9H321 246 aa21.41■■□□□ 1.02
SMARCB1-201ENST00000263121 YY1AP1Q9H869 796 aa21.41■■□□□ 1.02
SMARCB1-201ENST00000263121 EQTNQ9NQ60 294 aa21.41■■□□□ 1.02
SMARCB1-201ENST00000263121 SEMA4GQ9NTN9 838 aa21.41■■□□□ 1.02
SMARCB1-201ENST00000263121 OCIAD1Q9NX40 245 aa21.41■■□□□ 1.02
SMARCB1-201ENST00000263121 MMACHCQ9Y4U1 282 aa21.41■■□□□ 1.02
SMARCB1-201ENST00000263121 NUP210LQ5VU65 1888 aa21.41■■□□□ 1.02
SMARCB1-201ENST00000263121 C5orf58C9J3I9 102 aa21.4■■□□□ 1.02
SMARCB1-201ENST00000263121 MAOAP21397 527 aa21.4■■□□□ 1.02
SMARCB1-201ENST00000263121 CSTF2P33240 577 aaKnown RBP eCLIP21.4■■□□□ 1.02
SMARCB1-201ENST00000263121 CLCN2P51788 898 aa21.4■■□□□ 1.02
SMARCB1-201ENST00000263121 MAPK10P53779 464 aa21.4■■□□□ 1.02
SMARCB1-201ENST00000263121 MAP4K2Q12851 820 aa21.4■■□□□ 1.02
SMARCB1-201ENST00000263121 LRRC36Q1X8D7 754 aa21.4■■□□□ 1.02
SMARCB1-201ENST00000263121 EXOSC6Q5RKV6 272 aaKnown RBP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms