RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 NXPE4Q6UWF7 544 aa16.52■□□□□ 0.24
TRAM1-201ENST00000262213 B3GLCTQ6Y288 498 aa16.52■□□□□ 0.24
TRAM1-201ENST00000262213 RFPL4BQ6ZWI9 263 aa16.52■□□□□ 0.24
TRAM1-201ENST00000262213 C11orf96Q7Z7L8 435 aa16.52■□□□□ 0.24
TRAM1-201ENST00000262213 ZSCAN5AQ9BUG6 496 aa16.52■□□□□ 0.24
TRAM1-201ENST00000262213 OR2AG1Q9H205 316 aa16.52■□□□□ 0.24
TRAM1-201ENST00000262213 TMEM245Q9H330 911 aa16.52■□□□□ 0.24
TRAM1-201ENST00000262213 FBXW2Q9UKT8 454 aa16.52■□□□□ 0.24
TRAM1-201ENST00000262213 ZNF780AO75290 641 aaPredicted RBP16.52■□□□□ 0.23
TRAM1-201ENST00000262213 TIMP2P16035 220 aa16.52■□□□□ 0.23
TRAM1-201ENST00000262213 HOXD11P31277 338 aaPredicted RBP16.52■□□□□ 0.23
TRAM1-201ENST00000262213 GIPRP48546 466 aa16.52■□□□□ 0.23
TRAM1-201ENST00000262213 PRLHRP49683 370 aa16.52■□□□□ 0.23
TRAM1-201ENST00000262213 MLLT1Q03111 559 aaPredicted RBP16.52■□□□□ 0.23
TRAM1-201ENST00000262213 TAP2Q03519 686 aa16.52■□□□□ 0.23
TRAM1-201ENST00000262213 CNTN1Q12860 1018 aa16.52■□□□□ 0.23
TRAM1-201ENST00000262213 GRIN2CQ14957 1233 aa16.52■□□□□ 0.23
TRAM1-201ENST00000262213 OCLNQ16625 522 aa16.52■□□□□ 0.23
TRAM1-201ENST00000262213 UNC5DQ6UXZ4 953 aa16.52■□□□□ 0.23
TRAM1-201ENST00000262213 HSDL2Q6YN16 418 aa16.52■□□□□ 0.23
TRAM1-201ENST00000262213 ZNF730Q6ZMV8 503 aa16.52■□□□□ 0.23
TRAM1-201ENST00000262213 ADGRF3Q8IZF5 1079 aa16.52■□□□□ 0.23
TRAM1-201ENST00000262213 RASSF5Q8WWW0 418 aa16.52■□□□□ 0.23
TRAM1-201ENST00000262213 ZNF354BQ96LW1 612 aa16.52■□□□□ 0.23
TRAM1-201ENST00000262213 TRIM45Q9H8W5 580 aaPredicted RBP16.52■□□□□ 0.23
TRAM1-201ENST00000262213 MCUBQ9NWR8 336 aa16.52■□□□□ 0.23
TRAM1-201ENST00000262213 PRKAB1Q9Y478 270 aa16.52■□□□□ 0.23
TRAM1-201ENST00000262213 HSPB11Q9Y547 144 aa16.52■□□□□ 0.23
TRAM1-201ENST00000262213 MYO10Q9HD67 2058 aa16.52■□□□□ 0.23
TRAM1-201ENST00000262213 WASHC1A8K0Z3 465 aa16.51■□□□□ 0.23
TRAM1-201ENST00000262213 C12orf71A8MTZ7 269 aa16.51■□□□□ 0.23
TRAM1-201ENST00000262213 HMGN4O00479 90 aa16.51■□□□□ 0.23
TRAM1-201ENST00000262213 OLFM2O95897 454 aa16.51■□□□□ 0.23
TRAM1-201ENST00000262213 CH25HO95992 272 aa16.51■□□□□ 0.23
TRAM1-201ENST00000262213 ZNF30P17039 623 aa16.51■□□□□ 0.23
TRAM1-201ENST00000262213 ALAS2P22557 587 aa16.51■□□□□ 0.23
TRAM1-201ENST00000262213 PRKAG1P54619 331 aa16.51■□□□□ 0.23
TRAM1-201ENST00000262213 COL9A2Q14055 689 aaPredicted RBP16.51■□□□□ 0.23
TRAM1-201ENST00000262213 PLK5Q496M5 336 aa16.51■□□□□ 0.23
TRAM1-201ENST00000262213 ZNF57Q68EA5 555 aaPredicted RBP16.51■□□□□ 0.23
TRAM1-201ENST00000262213 WASH2PQ6VEQ5 465 aa16.51■□□□□ 0.23
TRAM1-201ENST00000262213 GALNT9Q9HCQ5 603 aa16.51■□□□□ 0.23
TRAM1-201ENST00000262213 TEKT2Q9UIF3 430 aa16.51■□□□□ 0.23
TRAM1-201ENST00000262213 PITPNM1O00562 1244 aa16.51■□□□□ 0.23
TRAM1-201ENST00000262213 PDPK1O15530 556 aa16.51■□□□□ 0.23
TRAM1-201ENST00000262213 PTNP21246 168 aa16.51■□□□□ 0.23
TRAM1-201ENST00000262213 IRS1P35568 1242 aa16.51■□□□□ 0.23
TRAM1-201ENST00000262213 KCNJ5P48544 419 aa16.51■□□□□ 0.23
TRAM1-201ENST00000262213 ZNF628Q5EBL2 1059 aa16.51■□□□□ 0.23
TRAM1-201ENST00000262213 TECPR1Q7Z6L1 1165 aa16.51■□□□□ 0.23
TRAM1-201ENST00000262213 ZFAND1Q8TCF1 268 aa16.51■□□□□ 0.23
TRAM1-201ENST00000262213 UFD1Q92890 307 aa16.51■□□□□ 0.23
TRAM1-201ENST00000262213 UPRTQ96BW1 309 aa16.51■□□□□ 0.23
TRAM1-201ENST00000262213 TIFAQ96CG3 184 aa16.51■□□□□ 0.23
TRAM1-201ENST00000262213 NEURL3Q96EH8 262 aa16.51■□□□□ 0.23
TRAM1-201ENST00000262213 TREX2Q9BQ50 279 aaPredicted RBP16.51■□□□□ 0.23
TRAM1-201ENST00000262213 WACQ9BTA9 647 aa16.51■□□□□ 0.23
TRAM1-201ENST00000262213 MCOLN1Q9GZU1 580 aa16.51■□□□□ 0.23
TRAM1-201ENST00000262213 NDOR1Q9UHB4 597 aa16.51■□□□□ 0.23
TRAM1-201ENST00000262213 A4GNTQ9UNA3 340 aa16.51■□□□□ 0.23
TRAM1-201ENST00000262213 SCN5AQ14524 2016 aa16.51■□□□□ 0.23
TRAM1-201ENST00000262213 C2orf92A0A1B0GVN3 265 aa16.5■□□□□ 0.23
TRAM1-201ENST00000262213 ISM1B1AKI9 464 aa16.5■□□□□ 0.23
TRAM1-201ENST00000262213 MEN1O00255 615 aa16.5■□□□□ 0.23
TRAM1-201ENST00000262213 PLPP1O14494 284 aa16.5■□□□□ 0.23
TRAM1-201ENST00000262213 PDE9AO76083 593 aa16.5■□□□□ 0.23
TRAM1-201ENST00000262213 STATHP02808 62 aa16.5■□□□□ 0.23
TRAM1-201ENST00000262213 SOD2P04179 222 aa16.5■□□□□ 0.23
TRAM1-201ENST00000262213 ELFN1P0C7U0 828 aa16.5■□□□□ 0.23
TRAM1-201ENST00000262213 NR2F1P10589 423 aa16.5■□□□□ 0.23
TRAM1-201ENST00000262213 ALPPL2P10696 532 aa16.5■□□□□ 0.23
TRAM1-201ENST00000262213 SMUG1Q53HV7 270 aa16.5■□□□□ 0.23
TRAM1-201ENST00000262213 MPP7Q5T2T1 576 aa16.5■□□□□ 0.23
TRAM1-201ENST00000262213 FAM92BQ6ZTR7 304 aa16.5■□□□□ 0.23
TRAM1-201ENST00000262213 PEX5LQ8IYB4 626 aa16.5■□□□□ 0.23
TRAM1-201ENST00000262213 CPXM2Q8N436 756 aa16.5■□□□□ 0.23
TRAM1-201ENST00000262213 FAM26EQ8N5C1 309 aa16.5■□□□□ 0.23
TRAM1-201ENST00000262213 TMEM145Q8NBT3 493 aa16.5■□□□□ 0.23
TRAM1-201ENST00000262213 OR9A1PQ8NGU1 263 aa16.5■□□□□ 0.23
TRAM1-201ENST00000262213 OR5H6Q8NGV6 325 aa16.5■□□□□ 0.23
TRAM1-201ENST00000262213 AP3S1Q92572 193 aa16.5■□□□□ 0.23
TRAM1-201ENST00000262213 POLDIP3Q9BY77 421 aaKnown RBP16.5■□□□□ 0.23
TRAM1-201ENST00000262213 GSTK1Q9Y2Q3 226 aa16.5■□□□□ 0.23
TRAM1-201ENST00000262213 FEZF1A0PJY2 475 aa16.5■□□□□ 0.23
TRAM1-201ENST00000262213 LYRM1O43325 122 aa16.5■□□□□ 0.23
TRAM1-201ENST00000262213 LALBAP00709 142 aa16.5■□□□□ 0.23
TRAM1-201ENST00000262213 MYCP01106 439 aaPredicted RBP16.5■□□□□ 0.23
TRAM1-201ENST00000262213 CPN2P22792 545 aa16.5■□□□□ 0.23
TRAM1-201ENST00000262213 ERP29P30040 261 aaKnown RBP16.5■□□□□ 0.23
TRAM1-201ENST00000262213 BUD31P41223 144 aaPredicted RBP16.5■□□□□ 0.23
TRAM1-201ENST00000262213 PNLIPRP1P54315 467 aa16.5■□□□□ 0.23
TRAM1-201ENST00000262213 P2RX3P56373 397 aa16.5■□□□□ 0.23
TRAM1-201ENST00000262213 CTBP2P56545 445 aa16.5■□□□□ 0.23
TRAM1-201ENST00000262213 SLC9B2Q86UD5 537 aa16.5■□□□□ 0.23
TRAM1-201ENST00000262213 SLC30A8Q8IWU4 369 aa16.5■□□□□ 0.23
TRAM1-201ENST00000262213 SIX5Q8N196 739 aa16.5■□□□□ 0.23
TRAM1-201ENST00000262213 LMLNQ96KR4 655 aa16.5■□□□□ 0.23
TRAM1-201ENST00000262213 ZNF607Q96SK3 696 aa16.5■□□□□ 0.23
TRAM1-201ENST00000262213 SERHL2Q9H4I8 314 aa16.5■□□□□ 0.23
TRAM1-201ENST00000262213 A4GALTQ9NPC4 353 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms