RNA–Protein interactions for RNA: ENST00000261692.6

CDK2AP1-201, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK2AP1, Length 1,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-201ENST00000261692 ANP32DO95626 131 aa22.38■■□□□ 1.17
CDK2AP1-201ENST00000261692 CPSF4O95639 269 aaKnown RBP22.38■■□□□ 1.17
CDK2AP1-201ENST00000261692 CAPNS1P04632 268 aa22.38■■□□□ 1.17
CDK2AP1-201ENST00000261692 ABCB1P08183 1280 aaPredicted RBP22.38■■□□□ 1.17
CDK2AP1-201ENST00000261692 COX6A1P12074 109 aa22.38■■□□□ 1.17
CDK2AP1-201ENST00000261692 KCNJ2P63252 427 aa22.38■■□□□ 1.17
CDK2AP1-201ENST00000261692 TMEM107Q6UX40 140 aa22.38■■□□□ 1.17
CDK2AP1-201ENST00000261692 TMEM64Q6YI46 380 aa22.38■■□□□ 1.17
CDK2AP1-201ENST00000261692 NDUFAF7Q7L592 441 aa22.38■■□□□ 1.17
CDK2AP1-201ENST00000261692 DPP10Q8N608 796 aa22.38■■□□□ 1.17
CDK2AP1-201ENST00000261692 THAP4Q8WY91 577 aa22.38■■□□□ 1.17
CDK2AP1-201ENST00000261692 MOAP1Q96BY2 351 aa22.38■■□□□ 1.17
CDK2AP1-201ENST00000261692 ELP4Q96EB1 424 aa22.38■■□□□ 1.17
CDK2AP1-201ENST00000261692 FBXL20Q96IG2 436 aa22.38■■□□□ 1.17
CDK2AP1-201ENST00000261692 WDR77Q9BQA1 342 aaPredicted RBP22.38■■□□□ 1.17
CDK2AP1-201ENST00000261692 C3orf14Q9HBI5 128 aa22.38■■□□□ 1.17
CDK2AP1-201ENST00000261692 TAGLN3Q9UI15 199 aa22.38■■□□□ 1.17
CDK2AP1-201ENST00000261692 SNX8Q9Y5X2 465 aa22.38■■□□□ 1.17
CDK2AP1-201ENST00000261692 NSG1A0A0A6YYJ2 146 aa22.37■■□□□ 1.17
CDK2AP1-201ENST00000261692 IGHV3-20A0A0C4DH32 117 aa22.37■■□□□ 1.17
CDK2AP1-201ENST00000261692 ERN1O75460 977 aaKnown RBP22.37■■□□□ 1.17
CDK2AP1-201ENST00000261692 KCNH1O95259 989 aa22.37■■□□□ 1.17
CDK2AP1-201ENST00000261692 CDK9P50750 372 aaKnown RBP22.37■■□□□ 1.17
CDK2AP1-201ENST00000261692 PRR5P85299 388 aa22.37■■□□□ 1.17
CDK2AP1-201ENST00000261692 ZNF267Q14586 743 aaPredicted RBP22.37■■□□□ 1.17
CDK2AP1-201ENST00000261692 PCOLCEQ15113 449 aa22.37■■□□□ 1.17
CDK2AP1-201ENST00000261692 EXT1Q16394 746 aa22.37■■□□□ 1.17
CDK2AP1-201ENST00000261692 PAGE3Q5JUK9 113 aa22.37■■□□□ 1.17
CDK2AP1-201ENST00000261692 REP15Q6BDI9 236 aa22.37■■□□□ 1.17
CDK2AP1-201ENST00000261692 BHLHB9Q6PI77 547 aa22.37■■□□□ 1.17
CDK2AP1-201ENST00000261692 DGAT2L6Q6ZPD8 337 aa22.37■■□□□ 1.17
CDK2AP1-201ENST00000261692 SENP5Q96HI0 755 aaPredicted RBP22.37■■□□□ 1.17
CDK2AP1-201ENST00000261692 CNPPD1Q9BV87 410 aa22.37■■□□□ 1.17
CDK2AP1-201ENST00000261692 DDX18Q9NVP1 670 aaKnown RBP22.37■■□□□ 1.17
CDK2AP1-201ENST00000261692 P4HTMQ9NXG6 502 aa22.37■■□□□ 1.17
CDK2AP1-201ENST00000261692 COPS7AQ9UBW8 275 aa22.37■■□□□ 1.17
CDK2AP1-201ENST00000261692 VPS4AQ9UN37 437 aa22.37■■□□□ 1.17
CDK2AP1-201ENST00000261692 PPIEQ9UNP9 301 aaKnown RBP22.37■■□□□ 1.17
CDK2AP1-201ENST00000261692 CCDC88CQ9P219 2028 aa22.36■■□□□ 1.17
CDK2AP1-201ENST00000261692 CELSR3Q9NYQ7 3312 aa22.36■■□□□ 1.17
CDK2AP1-201ENST00000261692 A0A096LPI6 279 aa22.36■■□□□ 1.17
CDK2AP1-201ENST00000261692 SEC24DO94855 1032 aaPredicted RBP22.36■■□□□ 1.17
CDK2AP1-201ENST00000261692 NPPAP01160 153 aa22.36■■□□□ 1.17
CDK2AP1-201ENST00000261692 MC3RP41968 323 aa22.36■■□□□ 1.17
CDK2AP1-201ENST00000261692 MRPS35P82673 323 aaKnown RBP22.36■■□□□ 1.17
CDK2AP1-201ENST00000261692 MGAT2Q10469 447 aa22.36■■□□□ 1.17
CDK2AP1-201ENST00000261692 FUT7Q11130 342 aa22.36■■□□□ 1.17
CDK2AP1-201ENST00000261692 ZSCAN1Q8NBB4 408 aa22.36■■□□□ 1.17
CDK2AP1-201ENST00000261692 B3GNT7Q8NFL0 401 aa22.36■■□□□ 1.17
CDK2AP1-201ENST00000261692 OR7G1Q8NGA0 311 aa22.36■■□□□ 1.17
CDK2AP1-201ENST00000261692 SLC2A12Q8TD20 617 aa22.36■■□□□ 1.17
CDK2AP1-201ENST00000261692 KAT2AQ92830 837 aa22.36■■□□□ 1.17
CDK2AP1-201ENST00000261692 EFCAB1Q9HAE3 211 aa22.36■■□□□ 1.17
CDK2AP1-201ENST00000261692 SIRT3Q9NTG7 399 aaPredicted RBP22.36■■□□□ 1.17
CDK2AP1-201ENST00000261692 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.36■■□□□ 1.17
CDK2AP1-201ENST00000261692 ERVK-19Q9WJR5 959 aa22.36■■□□□ 1.17
CDK2AP1-201ENST00000261692 SSUH2Q9Y2M2 353 aa22.36■■□□□ 1.17
CDK2AP1-201ENST00000261692 FBP2O00757 339 aa22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 MRASO14807 208 aa22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 HPP00738 406 aa22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 CT62P0C5K7 136 aa22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 ZCCHC18P0CG32 403 aa22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 ICAM2P13598 275 aa22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 SOAT1P35610 550 aa22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 SRSF6Q13247 344 aaKnown RBP22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 SPDYE7PQ495Y7 208 aa22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 FAM111BQ6SJ93 734 aa22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 LRRC69Q6ZNQ3 347 aa22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 ZNF621Q6ZSS3 439 aa22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 RETREG3Q86VR2 466 aa22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 SPACA3Q8IXA5 215 aa22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 OR2L13Q8N349 312 aa22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 OR1N1Q8NGS0 311 aa22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 SFXN5Q8TD22 340 aa22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 MESP1Q9BRJ9 268 aa22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 INPP5KQ9BT40 448 aa22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 OR8D2Q9GZM6 311 aa22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 CXorf36Q9H7Y0 433 aa22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 NTMQ9P121 344 aa22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 ZNF639Q9UID6 485 aa22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 TMEM8BA6NDV4 472 aa22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 C1QTNF9BB2RNN3 333 aa22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 EMC8O43402 210 aa22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 COQ9O75208 318 aa22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 DDAH2O95865 285 aa22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 KRT16P08779 473 aa22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 C1QTNF9P0C862 333 aa22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 UQCRC2P22695 453 aa22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 PTGER1P34995 402 aa22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 SLC26A5P58743 744 aa22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 NFYCQ13952 458 aa22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 TRMT12Q53H54 448 aaKnown RBP22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 LRIF1Q5T3J3 769 aa22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 BROXQ5VW32 411 aa22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 PLAG1Q6DJT9 500 aa22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 OR7G2Q8NG99 324 aa22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 NSL1Q96IY1 281 aa22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 FER1L6-AS2Q96M78 137 aa22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 PHF12Q96QT6 1004 aa22.35■■□□□ 1.17
CDK2AP1-201ENST00000261692 ZCCHC3Q9NUD5 404 aaKnown RBP22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms