RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 DENND4AQ7Z401 1863 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 DSPPQ9NZW4 1301 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 TMEM202A6NGA9 273 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 PRRT4C9JH25 899 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 E7EQ34 232 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 FOXE1O00358 373 aaPredicted RBP10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 NPC1O15118 1278 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 RFPL3O75679 317 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 SLC16A8O95907 504 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 IFNA14P01570 189 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 NUDT7P0C024 238 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 MSL3P1P0C860 447 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 CTRB1P17538 263 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 SDC2P34741 201 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 VIPR2P41587 438 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 XCR1P46094 333 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 BDKRB1P46663 353 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 PREPP48147 710 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 HNRNPA0Q13151 305 aaKnown RBP10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 ZNF234Q14588 700 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 ZNF648Q5T619 568 aaPredicted RBP10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 TRIQKQ629K1 86 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 FAAH2Q6GMR7 532 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 CTRB2Q6GPI1 263 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 TRAPPC5Q8IUR0 188 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 GHDCQ8N2G8 530 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 ESX1Q8N693 406 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 VN1R2Q8NFZ6 395 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 OR9A1PQ8NGU1 263 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 OR52J3Q8NH60 311 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 SETD7Q8WTS6 366 aaKnown RBP10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 GEMIN6Q8WXD5 167 aaKnown RBP10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 NXPE3Q969Y0 559 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 RSPRY1Q96DX4 576 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 OMA1Q96E52 524 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 GPR137Q96N19 417 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 PRRG3Q9BZD7 231 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 MAT2BQ9NZL9 334 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 ELF5Q9UKW6 265 aaPredicted RBP10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 VPS4AQ9UN37 437 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 ITM2BQ9Y287 266 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 DNMT3AQ9Y6K1 912 aaPredicted RBP10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 ALPK3Q96L96 1907 aa10.24□□□□□ -0.77
CHRNA1-201ENST00000261007 MGAT4DA6NG13 374 aa10.24□□□□□ -0.77
CHRNA1-201ENST00000261007 HEPACAM2A8MVW5 462 aa10.24□□□□□ -0.77
CHRNA1-201ENST00000261007 M0R129 80 aa10.24□□□□□ -0.77
CHRNA1-201ENST00000261007 TLR4O00206 839 aa10.24□□□□□ -0.77
CHRNA1-201ENST00000261007 STK25O00506 426 aa10.24□□□□□ -0.77
CHRNA1-201ENST00000261007 SPINT1O43278 529 aa10.24□□□□□ -0.77
CHRNA1-201ENST00000261007 LILRB5O75023 590 aa10.24□□□□□ -0.77
CHRNA1-201ENST00000261007 ENTPD6O75354 484 aa10.24□□□□□ -0.77
CHRNA1-201ENST00000261007 SOD1P00441 154 aa10.24□□□□□ -0.77
CHRNA1-201ENST00000261007 RPN2P04844 631 aa10.24□□□□□ -0.77
CHRNA1-201ENST00000261007 SLC2A2P11168 524 aaPredicted RBP10.24□□□□□ -0.77
CHRNA1-201ENST00000261007 LAMP1P11279 417 aa10.24□□□□□ -0.77
CHRNA1-201ENST00000261007 CPEP16870 476 aa10.24□□□□□ -0.77
CHRNA1-201ENST00000261007 CD22P20273 847 aa10.24□□□□□ -0.77
CHRNA1-201ENST00000261007 HSD17B2P37059 387 aa10.24□□□□□ -0.77
CHRNA1-201ENST00000261007 BTG1P62324 171 aa10.24□□□□□ -0.77
CHRNA1-201ENST00000261007 SF3A2Q15428 464 aaKnown RBP10.24□□□□□ -0.77
CHRNA1-201ENST00000261007 GAB4Q2WGN9 574 aa10.24□□□□□ -0.77
CHRNA1-201ENST00000261007 POM121L1PQ3SYA9 428 aa10.24□□□□□ -0.77
CHRNA1-201ENST00000261007 KLHL17Q6TDP4 642 aa10.24□□□□□ -0.77
CHRNA1-201ENST00000261007 ADAMTSL4Q6UY14 1074 aa10.24□□□□□ -0.77
CHRNA1-201ENST00000261007 NAGSQ8N159 534 aa10.24□□□□□ -0.77
CHRNA1-201ENST00000261007 C9orf62Q8N4C0 152 aa10.24□□□□□ -0.77
CHRNA1-201ENST00000261007 ZNF366Q8N895 744 aa10.24□□□□□ -0.77
CHRNA1-201ENST00000261007 PLA2G15Q8NCC3 412 aa10.24□□□□□ -0.77
CHRNA1-201ENST00000261007 OR9Q2Q8NGE9 314 aa10.24□□□□□ -0.77
CHRNA1-201ENST00000261007 OR2L2Q8NH16 312 aa10.24□□□□□ -0.77
CHRNA1-201ENST00000261007 LRRC20Q8TCA0 184 aa10.24□□□□□ -0.77
CHRNA1-201ENST00000261007 AKAP1Q92667 903 aaKnown RBP eCLIP10.24□□□□□ -0.77
CHRNA1-201ENST00000261007 C11orf24Q96F05 449 aaPredicted RBP10.24□□□□□ -0.77
CHRNA1-201ENST00000261007 QRFPRQ96P65 431 aa10.24□□□□□ -0.77
CHRNA1-201ENST00000261007 AIFM2Q9BRQ8 373 aa10.24□□□□□ -0.77
CHRNA1-201ENST00000261007 SGPP1Q9BX95 441 aa10.24□□□□□ -0.77
CHRNA1-201ENST00000261007 HDHD5Q9BXW7 423 aa10.24□□□□□ -0.77
CHRNA1-201ENST00000261007 PPP1R3EQ9H7J1 279 aa10.24□□□□□ -0.77
CHRNA1-201ENST00000261007 ISYNA1Q9NPH2 558 aa10.24□□□□□ -0.77
CHRNA1-201ENST00000261007 PTTG3PQ9NZH4 202 aa10.24□□□□□ -0.77
CHRNA1-201ENST00000261007 TMCC3Q9ULS5 477 aa10.24□□□□□ -0.77
CHRNA1-201ENST00000261007 SLC6A14Q9UN76 642 aa10.24□□□□□ -0.77
CHRNA1-201ENST00000261007 KIAA1549LQ6ZVL6 1849 aa10.23□□□□□ -0.77
CHRNA1-201ENST00000261007 KIF26AQ9ULI4 1882 aaPredicted RBP10.23□□□□□ -0.77
CHRNA1-201ENST00000261007 FAM240BA0A1B0GVZ2 78 aa10.23□□□□□ -0.77
CHRNA1-201ENST00000261007 WASHC1A8K0Z3 465 aa10.23□□□□□ -0.77
CHRNA1-201ENST00000261007 GPR89AB7ZAQ6 455 aa10.23□□□□□ -0.77
CHRNA1-201ENST00000261007 SGK494L7N484 410 aa10.23□□□□□ -0.77
CHRNA1-201ENST00000261007 PCDH17O14917 1159 aa10.23□□□□□ -0.77
CHRNA1-201ENST00000261007 SCAMP2O15127 329 aaKnown RBP10.23□□□□□ -0.77
CHRNA1-201ENST00000261007 YY2O15391 372 aa10.23□□□□□ -0.77
CHRNA1-201ENST00000261007 LYRM1O43325 122 aa10.23□□□□□ -0.77
CHRNA1-201ENST00000261007 PI15O43692 258 aa10.23□□□□□ -0.77
CHRNA1-201ENST00000261007 TNFRSF21O75509 655 aa10.23□□□□□ -0.77
CHRNA1-201ENST00000261007 SLC22A5O76082 557 aa10.23□□□□□ -0.77
CHRNA1-201ENST00000261007 GADD45GO95257 159 aa10.23□□□□□ -0.77
CHRNA1-201ENST00000261007 ADAP00813 363 aa10.23□□□□□ -0.77
CHRNA1-201ENST00000261007 FHP07954 510 aa10.23□□□□□ -0.77
CHRNA1-201ENST00000261007 HBQ1P09105 142 aa10.23□□□□□ -0.77
CHRNA1-201ENST00000261007 GPR89BP0CG08 455 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms